NO03G04310, NO03G04310 (gene) Nannochloropsis oceanica

Overview
NameNO03G04310
Unique NameNO03G04310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1476
Alignment locationchr3:1244160..1245988 -

Link to JBrowse

Properties
Property NameValue
DescriptionHomocysteine s-methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1244160..1245988 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036589HCY_dom_sf
IPR003726S_MeTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO03G04310 vs. NCBI_GenBank
Match: EWM29830.1 (homocysteine s-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 388.7 bits (997), Expect = 2.300e-104
Identity = 221/491 (45.01%), Postives = 267/491 (54.38%), Query Frame = 0
Query:   37 NPLAGLLAHQRYIINDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKD----SKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEEL------------------------------------------------------------------------------------------------------------------------------MDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEV--------PLLVAYPNLGEIWEDKQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRARLI 390
            NPLA +LAHQ  II+DGGMGTLLEA IG PLD  LWSAGC+ THP AIK  H+QYFEAGADIAT +TYQA+++G+M      +T+ QAEDLIRKGV LAIEARDEFWA         +K +      RQRPLVAAS+GCYGAAQADGSEYRG YGLT+EE+                                                                                                                               DWHRPRLA+L  TDAD LAFETIPC++E++AIL LL EG +Q         S+ +  R PCWIT+ACQ+ T LNSGESL +C + V ALD  S  +VV  GVNC  PQHVE AL+V+R    + +A KEV         +L+AYPN GE+W+DK+WLPGTG CP+   FA  A +WV AGA ++GGCCRTTP+TI+A+RA L+
Sbjct:    8 NPLAAMLAHQNCIISDGGMGTLLEAYIGAPLDSKLWSAGCLRTHPSAIKAVHRQYFEAGADIATAATYQASLEGFMSSAGVRVTRAQAEDLIRKGVALAIEARDEFWAAYSREEAGKRKTEEAGGGTRQRPLVAASVGCYGAAQADGSEYRGAYGLTVEEVSREIVPALDVLLPSRTSSPCMRPHAPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQ-------EGSAPTSRRTPCWITLACQDATHLNSGESLVSCVQLVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREGLLTISAAKEVISAAKGSERILIAYPNSGEVWQDKRWLPGTGVCPSSRDFADLARKWVVAGARVLGGCCRTTPETIKALRACLL 491          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: EWM29829.1 (homocysteine s-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 332.0 bits (850), Expect = 2.500e-87
Identity = 168/283 (59.36%), Postives = 204/283 (72.08%), Query Frame = 0
Query:  119 ITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKD----SKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEV--------PLLVAYPNLGEIWEDKQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRARLI 390
            +T+ QAEDLIRKGV LAIEARDEFWA         +K +      RQRPLVAAS+GCYGAAQADGSEYRG YGLT+EELMDWHRPRLA+L  TDAD LAFETIPC++E++AIL LL EG +Q         S+ +  R PCWIT+ACQ+ T LNSGESL +C + V ALD  S  +VV  GVNC  PQHVE AL+V+R    + +A KEV         +L+AYPN GE+W+DK+WLPGTG CP+   FA  A +WV AGA ++GGCCRTTP+TI+A+RA L+
Sbjct:    8 VTRAQAEDLIRKGVALAIEARDEFWAAYSREEAGKRKTEEAGGGTRQRPLVAASVGCYGAAQADGSEYRGAYGLTVEELMDWHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQ-------EGSAPTSRRTPCWITLACQDATHLNSGESLVSCVQLVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREGLLTISAAKEVISAAKGSERILIAYPNSGEVWQDKRWLPGTGVCPSSRDFADLARKWVVAGARVLGGCCRTTPETIKALRACLL 283          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: OFZ80118.1 (homocysteine S-methyltransferase [Bdellovibrionales bacterium RIFOXYD1_FULL_53_11])

HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61
Identity = 147/354 (41.53%), Postives = 200/354 (56.50%), Query Frame = 0
Query:   38 PLAGLLAHQRYIINDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWEDKQ--WLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRARLI 390
            P +  +A Q +++ DGGMGT L A+ G  +   LWSA  +   P  I++ H  YF AGAD+ATT++YQAT QG+   E   I  ++A  LIRK V +A+EARD FW         ++   + R++PL+AAS+G YGA  ADGSEYRG YGL++ EL D+HR RLA L  T AD LAFET+PC  E  A + LL EGE                  KP WI+ +C++G  +  G   E C   V     + + ++VA GVNC  P+HVE   S+IR      A  +    ++ YPN  EIW+ ++  W+        P  F   A +W EAGA I+GGCCRT    I+A+R RL+
Sbjct:    2 PFSRFIAKQGFVVLDGGMGTEL-AIRGADVTDELWSARLLRDDPGIIRQIHYDYFAAGADVATTASYQATFQGF---EKVGIGYDEAASLIRKSVEIAVEARDAFWL--------VQDSRAGREKPLIAASIGPYGAFLADGSEYRGFYGLSVRELADFHRDRLAALVQTRADMLAFETVPCPEEAEAYVRLLEEGE-----------------AKPAWISFSCKDGLSVCQGVPFERCIDIV-----AGSPQIVAIGVNCTAPEHVE---SLIR-----AARSRTDKAIIVYPNSSEIWDARRRTWVSPAHGPVKPADF---APQWFEAGARIIGGCCRTGIADIRALRTRLL 310          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: XP_015632081.1 (PREDICTED: homocysteine S-methyltransferase 1 [Oryza sativa Japonica Group] >AAN05322.1 Putative homocysteine S-methyltransferase-1 [Oryza sativa Japonica Group] >ABF94697.1 Homocysteine S-methyltransferase 1, putative, expressed [Oryza sativa Japonica Group] >EAZ26096.1 hypothetical protein OsJ_09954 [Oryza sativa Japonica Group] >EEC74781.1 hypothetical protein OsI_10560 [Oryza sativa Indica Group])

HSP 1 Score: 244.2 bits (622), Expect = 7.000e-61
Identity = 146/337 (43.32%), Postives = 191/337 (56.68%), Query Frame = 0
Query:   52 DGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYG--LTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWED--KQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAV 385
            DGG  T LEAL G  ++  LWSA C++T P  IKE H QY EAGAD+  +S+YQAT+ G++ R    +   +AE L+R+ + LA+EARDEFW  T      ++K      R LVAAS+G YGA  ADGSEY G YG  +T E+L D+HR RL +L +   D +AFE IP + E  A++ LL E   Q                 P WI  +  +G  L SGES   C + + A D     +V   GVNC PPQ +E  +  +++  T +A       +  YPN GEIW+   K+WLP    C   + F   A RW EAGAS+VGGCCRTTP TI+AV
Sbjct:   19 DGGFATQLEAL-GADINDPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATIPGFLAR---GMLLEEAEGLLRRSIELALEARDEFWKST------LRKSKPVYNRALVAASIGSYGAYLADGSEYSGSYGEDITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEENIQ----------------VPSWICFSSVDGKNLCSGESFAECLQFLNASD-----KVTIVGVNCTPPQFIEGIIRELKKQ-TKKA-------IAVYPNSGEIWDGRAKRWLP--AQCFGHKSFDALAKRWQEAGASLVGGCCRTTPSTIRAV 314          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: XP_006649653.2 (PREDICTED: homocysteine S-methyltransferase 1 [Oryza brachyantha])

HSP 1 Score: 244.2 bits (622), Expect = 7.000e-61
Identity = 149/337 (44.21%), Postives = 190/337 (56.38%), Query Frame = 0
Query:   52 DGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYG--LTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWED--KQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAV 385
            DGG  T LEAL G  ++  LWSA C++T P  IKE H QY EAGAD+  +S+YQAT+ G++ R    I    AE L+R  V LA+EARDEFW  T      ++K      R LVAAS+G YGA  ADGSEY G YG  +TIE+L D+HR RL +L +   D +AFE IP + E  A++ LL E + Q                 P WI  +  +G  L SGES   C + + A D     +V   GVNC PPQ +E   S+IR     E   +    +  YPN GE+W+   K+WLP    C   + F + A RW EAGAS +GGCCRTTP TI+AV
Sbjct:   20 DGGFATQLEAL-GADINDPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATIPGFLAR---GILLEDAEGLLRTSVELALEARDEFWKST------LRKSKPVYNRALVAASIGSYGAYLADGSEYSGSYGEDITIEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEDIQ----------------VPSWICFSSVDGKNLCSGESFADCLQILNASD-----KVAIVGVNCTPPQFIE---SIIR-----ELKKQTKKAIAVYPNSGEVWDGRAKRWLP--VQCFGHKSFDVLAKRWQEAGASFIGGCCRTTPSTIRAV 315          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: XP_004985165.1 (homocysteine S-methyltransferase 1 [Setaria italica] >XP_004985166.1 homocysteine S-methyltransferase 1 [Setaria italica] >KQK91915.1 hypothetical protein SETIT_036632mg [Setaria italica])

HSP 1 Score: 242.7 bits (618), Expect = 2.000e-60
Identity = 143/340 (42.06%), Postives = 193/340 (56.76%), Query Frame = 0
Query:   49 IINDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYG--LTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWED--KQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAV 385
            ++ DGG  T LEAL G  ++  LWSA C++  P  +KE H QY EAGAD+  +S+YQAT+ G++ R    +T ++AEDL++  V LA+EARDEFW  T      ++K      R LVAAS+G YGA  ADGSEY G YG  +T E+L D+HR RL +L     D +AFE IP + E  A++ LL E   Q                 P WI  +  +G  L SGES   C + +     +++ +V   GVNC PPQ +E  +   R+  T +A       +  YPN GE+W+   K+WLP    C   + F   A RW EAGAS++GGCCRTTP TI+AV
Sbjct:   15 VVIDGGFATQLEAL-GADINDPLWSAACLIARPHLVKEVHMQYLEAGADVIISSSYQATIPGFLAR---GMTLDEAEDLLQTSVKLALEARDEFWKST------LRKSKPIYNRALVAASIGSYGAYLADGSEYSGSYGADITTEKLKDFHRRRLQVLAGAGPDLIAFEAIPNKMEAQALVELLEEENIQ----------------VPSWICFSSVDGKHLCSGESFADCLQIL-----NASEKVAVVGVNCTPPQFIEGIICEFRKQ-TKKA-------IAVYPNSGEVWDGIAKRWLP--AECLGHKSFDALAKRWHEAGASLIGGCCRTTPSTIRAV 313          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: XP_010228957.1 (homocysteine S-methyltransferase 1 [Brachypodium distachyon] >KQK22843.1 hypothetical protein BRADI_1g69627v3 [Brachypodium distachyon])

HSP 1 Score: 240.7 bits (613), Expect = 7.700e-60
Identity = 146/341 (42.82%), Postives = 192/341 (56.30%), Query Frame = 0
Query:   52 DGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYG--LTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWED--KQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRARL 389
            DGG  T LEAL G  ++  LWSA C++T P  IKE H QY EAGAD+  +S+YQAT+ G++ R    + Q +AE L+R  V LA+EARDEFW  T      + K      R LVAAS+G YGA  ADGSEY G YG  +  E+L D+HR RL +L +   D +AFE IP + E  A++ LL E + Q                 P WI  +  +G  L SGES   C + +     +++ +V   GVNC PPQ +E    +IR     +  GK +     YPN GE+W+   K+WLP    C   + F + A RW EAGAS++GGCCRTTP TI+AV   L
Sbjct:   19 DGGFATQLEAL-GADINDSLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATIPGFLAR---GLRQEEAEGLLRTSVHLALEARDEFWKST------LTKPKPIYNRALVAASIGSYGAFLADGSEYSGSYGDNIMAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEDIQ----------------VPSWICFSSVDGKHLCSGESFGDCLQIL-----NASEKVAIVGVNCTPPQFIE---GIIRE--FKKQTGKAI---AVYPNSGEVWDGRAKRWLP--AECFGRKSFDVMARRWQEAGASLIGGCCRTTPSTIRAVSKAL 318          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: WP_047494558.1 (homocysteine S-methyltransferase [Methylibium sp. CF059])

HSP 1 Score: 240.7 bits (613), Expect = 7.700e-60
Identity = 148/352 (42.05%), Postives = 196/352 (55.68%), Query Frame = 0
Query:   37 NPLAGLLAHQRYIINDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWE--DKQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRA 387
            NPLA LLA +  +I DG + T LE   G  L+  LWSA  ++  P+ I++ H  YFEAGAD+ATT++YQAT + + +R         A DL+R+ V LA +AR+ FW+          +  + R RPLVAAS+G YGA  ADGSEYRG YGL+++ELMD+HRPR+ +L    AD LA ETIPC  E  A+  LL E                       WI+ +C++G   + GE L  C   V ALDG    +V A G+NC  P+H+   ++  R       A    PLLV YPN GE ++  DKQW      C   E FA  A+ W   GA ++GGCCRT P  I+AV+A
Sbjct:    6 NPLAALLAQRPLVILDGALATELERR-GADLNDALWSAKLLIEQPELIRQVHLDYFEAGADVATTASYQATFEAFARR---GFGAQAAADLMRRSVALAADAREAFWS--------HPENRAGRMRPLVAASVGPYGAMLADGSEYRGHYGLSLQELMDFHRPRMKVLVDAGADLLACETIPCLVEATALASLLPEFPG-----------------ITAWISFSCRDGEFNSEGERLADC---VAALDG--FEQVAAVGINCTAPEHISSLVAAAR-------AHTRKPLLV-YPNSGEHYDATDKQW----HGCSHSEHFAEQASDWYRMGARLIGGCCRTGPDDIRAVKA 311          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: WP_106375553.1 (homocysteine S-methyltransferase [Halomonas songnenensis] >PRY63499.1 homocysteine S-methyltransferase [Halomonas songnenensis])

HSP 1 Score: 240.7 bits (613), Expect = 7.700e-60
Identity = 148/353 (41.93%), Postives = 199/353 (56.37%), Query Frame = 0
Query:   34 TRRNPLAGLLAHQRYIINDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWE--DKQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAV 385
            ++ NP+  LLA   +++ DG + T LEAL G  L+  LWSA  +   P+ I++ H+ YFEAGAD A T++YQAT+ G+MQ     +T  QA +LI++ VTLA+EARD  W P  G AD        R RPLVAAS+G YGA  ADGSEYRG Y L    L+++HR RL LL  + AD LA ET+P   E LAI  LL E    +                  WIT + ++G  ++ G  +EACA  +    G     V A GVNC   +H+E  ++ I+R         ++P+LV YPN GE ++   K W P       P G    A +W+ AGAS +GGCCRTTP+ IQA+
Sbjct:    2 SQSNPIKALLADAPFMVIDGALATELEAL-GCDLNDSLWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATIPGFMQA---GMTVEQARELIKRSVTLAMEARDAVWQP--GQAD--------RPRPLVAASVGPYGAYLADGSEYRGGYDLDRAGLVEFHRERLELLLASGADLLAVETLPSLEEALAITDLLAEHPGAQ-----------------AWITFSAKDGEHISDGTPIEACAAALAGCPG-----VAAIGVNCTALKHIESLIASIKRAC-------DLPVLV-YPNSGEQYDPVTKTWHPAACEHSGPSGLVQGAEQWLAAGASGIGGCCRTTPEDIQAL 310          
BLAST of NO03G04310 vs. NCBI_GenBank
Match: BAJ94521.1 (predicted protein [Hordeum vulgare subsp. vulgare] >BAJ89046.1 predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 240.4 bits (612), Expect = 1.000e-59
Identity = 148/341 (43.40%), Postives = 190/341 (55.72%), Query Frame = 0
Query:   52 DGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIATTSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVADEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYG--LTIEELMDWHRPRLALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWED--KQWLPGTGSCPTPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRARL 389
            DGG  T LEAL G  ++  LWSA C++T P  IKE H QY EAGAD+  +S+YQAT+ G++ R    +   +AE L+R  V LA+EARDEFW  T      ++K      R LVAAS+G YGA  ADGSEY G YG  +T E+L D+HR RL +L +   D +AFE IP + E  A++ LL E + Q                 P WI  +  +G  L SGES   C   + A D     +V   GVNC PPQ VE  +   ++  T +A       +  YPN GE+W+   K+WLP    C   + F   A RW EAGAS+VGGCCRTTP TI+AV   L
Sbjct:   20 DGGFATQLEAL-GADINDPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATIPGFLAR---GLLLEEAEGLLRTSVQLALEARDEFWKST------LRKSKPVYNRALVAASVGSYGAYLADGSEYSGSYGDDVTAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEDIQ----------------VPSWICFSSVDGKHLCSGESFGDCLEILNASD-----KVAIVGVNCTPPQFVEGIIRDFKKQ-TEKA-------IAVYPNSGEVWDGRAKRWLP--VECFGRKSFDAMARRWQEAGASLVGGCCRTTPSTIRAVSKAL 319          
The following BLAST results are available for this feature:
BLAST of NO03G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29830.12.300e-10445.01homocysteine s-methyltransferase [Nannochloropsis ... [more]
EWM29829.12.500e-8759.36homocysteine s-methyltransferase [Nannochloropsis ... [more]
OFZ80118.11.100e-6141.53homocysteine S-methyltransferase [Bdellovibrionale... [more]
XP_015632081.17.000e-6143.32PREDICTED: homocysteine S-methyltransferase 1 [Ory... [more]
XP_006649653.27.000e-6144.21PREDICTED: homocysteine S-methyltransferase 1 [Ory... [more]
XP_004985165.12.000e-6042.06homocysteine S-methyltransferase 1 [Setaria italic... [more]
XP_010228957.17.700e-6042.82homocysteine S-methyltransferase 1 [Brachypodium d... [more]
WP_047494558.17.700e-6042.05homocysteine S-methyltransferase [Methylibium sp. ... [more]
WP_106375553.17.700e-6041.93homocysteine S-methyltransferase [Halomonas songne... [more]
BAJ94521.11.000e-5943.40predicted protein [Hordeum vulgare subsp. vulgare]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005479NSK005479Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04310.2NO03G04310.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04310.1NO03G04310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100017g12gene787Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04310.2NO03G04310.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04310.1NO03G04310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04310 ID=NO03G04310|Name=NO03G04310|organism=Nannochloropsis oceanica|type=gene|length=1476bp
ACAGGGCATGTGAGGCAGCCATGGCGGTGGCGGCAGCAGCAGCAGAAGCG
GTTGGGTTGTCAAAGGAAAAAGGCTCGGACACGGAGGCAAGCATCGTGAC
GCCAGCCAGCAGCACATGCACTCGTAGGAACCCGTTGGCAGGCCTCTTGG
CGCATCAACGCTACATAATTAATGATGGCGGCATGGGAACACTGCTCGAG
GCCTTGATAGGCATGCCCTTGGACCCATTGTTGTGgtaagagtgtgcgaa
tgcggtggggagtgagctggagtgctagagcggcccgtgggaaatttgcc
gtttttactaatgaaggggtgctcaacttctctatttcatgtatcataca
tccaatatttgtttatagGTCAGCAGGTTGCGTCCTAACCCATCCCGATG
CCATCAAGGAGGCTCACAAGCAGTATTTTGAGGCTGGCGCCGACATAGCT
ACCACTTCCACCTACCAAGCGACAGTGCAAGGGTACATGCAAAGGGAAAA
TGATGACATCACGCAAAATCAAGCCGAAGACTTGATTCGCAAAGGTGTGA
CCTTGGCCATCGAGGCCCGCGACGAGTTTTGGGCCCCTACAGGAGGAGTG
GCAGATGAGATGAAGAAAAAGGACAGTAAGCGACAACGCCCTCTAGTGGC
CGCCAGCCTGGGGTGCTACGGCGCGGCCCAAGCGGACGGCTCTGAATATC
GAGGCCAGTACGGGTTGACGATAGAAGAGGTGAGTGTCAGCAGACGAGTC
GCTTCCCGCAATACAACTTATTCTTCCAATCTAAGGCACTTTCTCATTTA
CCCTCCTTTCCTCATTTTAAACGAACAAAAGCTTATGGACTGGCACCGTC
CCCGTCTTGCCCTTCTCGACACGACAGACGCTGACTTTTTGGCATTTGAA
ACTATCCCTTGCGAATCCGAGCTCCTCGCCATTCTGTACCTCCTCCACGA
AGGAGAAGATCAACGCAAAGACACACATGCCAAGAGTAGCAGCAGCCGCA
GCCGCAGCCGCAAGCCTTGCTGGATTACCATGGCTTGCCAAAATGGCACA
CGCCTTAATAGCGGTGAGTCCTTAGAAGCCTGCGCGCGGCATGTGCTTGC
GTTGGACGGTAGCTCAACGTCAAGGGTGGTGGCATTTGGAGTCAACTGCA
TGCCTCCCCAACATGTCGAAGAGGCCCTCTCGGTGATCCGGCGCACTTTC
ACTTCCGAAGCAGCAGGAAAAGAAGTGCCTTTGTTGGTAGCATATCCCAA
CTTGGGTGAGATTTGGGAGGACAAACAGTGGCTTCCGGGGACGGGTTCCT
GTCCTACTCCCGAAGGCTTTGCTCTCTCGGCTGCGCGGTGGGTCGAAGCA
GGGGCTTCGATCGTGGGGGGATGTTGCCGGACGACGCCCAAAACAATCCA
AGCCGTACGGGCACGTCTGATTCCAGTGGAGGAAGAAGAGAAGCAGGGTG
TAAATGACAAGCGAAAGCAAACTTGA
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protein sequence of NO03G04310.2

>NO03G04310.2-protein ID=NO03G04310.2-protein|Name=NO03G04310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=441bp
MAVAAAAAEAVGLSKEKGSDTEASIVTPASSTCTRRNPLAGLLAHQRYII
NDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIAT
TSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVA
DEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEEVSVSRRVA
SRNTTYSSNLRHFLIYPPFLILNEQKLMDWHRPRLALLDTTDADFLAFET
IPCESELLAILYLLHEGEDQRKDTHAKSSSSRSRSRKPCWITMACQNGTR
LNSGESLEACARHVLALDGSSTSRVVAFGVNCMPPQHVEEALSVIRRTFT
SEAAGKEVPLLVAYPNLGEIWEDKQWLPGTGSCPTPEGFALSAARWVEAG
ASIVGGCCRTTPKTIQAVRARLIPVEEEEKQGVNDKRKQT*
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protein sequence of NO03G04310.1

>NO03G04310.1-protein ID=NO03G04310.1-protein|Name=NO03G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MAVAAAAAEAVGLSKEKGSDTEASIVTPASSTCTRRNPLAGLLAHQRYII
NDGGMGTLLEALIGMPLDPLLWSAGCVLTHPDAIKEAHKQYFEAGADIAT
TSTYQATVQGYMQRENDDITQNQAEDLIRKGVTLAIEARDEFWAPTGGVA
DEMKKKDSKRQRPLVAASLGCYGAAQADGSEYRGQYGLTIEELMDWHRPR
LALLDTTDADFLAFETIPCESELLAILYLLHEGEDQRKDTHAKSSSSRSR
SRKPCWITMACQNGTRLNSGESLEACARHVLALDGSSTSRVVAFGVNCMP
PQHVEEALSVIRRTFTSEAAGKEVPLLVAYPNLGEIWEDKQWLPGTGSCP
TPEGFALSAARWVEAGASIVGGCCRTTPKTIQAVRARLIPVEEEEKQGVN
DKRKQT*
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Synonyms
Publications