NO03G04230, NO03G04230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04230 vs. NCBI_GenBank
Match: EWM29855.1 (negative elongation factor b-like protein [Nannochloropsis gaditana]) HSP 1 Score: 932.9 bits (2410), Expect = 1.100e-267 Identity = 656/1263 (51.94%), Postives = 776/1263 (61.44%), Query Frame = 0 Query: 107 MDGSECVVDGDTKKRALPKLSLGXXXXXXXXXXXXXXXXXXAPPVTITASKPPGVGPALTLKSLVPEATASETSAPVRLKWGVALNSSATAKPKLVVGTTNRATVTTAHAP-----PSPLPQPPSSATLLRSPTPSTRMEVVVATPAVQTTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSTQPILKRKTFITNTP--KSSIRTLPSTSP--KELTQIRGPPVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDNPSIAQLVSCVNTDDNDKLEQVVNRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEEWVKEGTVEGKGLIQVQVHLKAILATCDSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLP-GNLSAAAAEKAWSKIPSLENALEDSMNYLINLDADTRWFAKPVWEVWPDIEQAYIAVVPHPMDLGTMKKRIKAG------KEGGHGGFYTSFEAFDKDAERVFDNCMAFNPVGK----------------------------RDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTVPQPLQGRPRVEGQMWGQALMLLADPFVLHVLGKTVKQQLDEVYKSHGLPKDHPLLPSLLQLLFLGLDARRQLVLVLHKHKTPGPXXXXXXXXMLLAKKGGKAGNVAPRPPNLPPGFSIPDARVSPLLVRDKDGELAAENDVQEAARTVLPSLLEIFAHVNLAQKYEGTTEGWEGQPHDKEEVQEKMLESVGRLYRSCKARQPSPLLLCMVSHSLCHSLATADDARTTPLAKTLAALLDHLNRKKRSEMLLATPDPQDRGLWICLASAGLLRVPRK---------KARVTGA--------XXXXXXXXXXXXXXXXXXXXXXXXXXXPPLDHELRDLLLSLFVKQLPFIPEPCSLSFCHEQVMRLLLGWMARGAFLKPKRRDGGGEADEEREKKEENAVKLWVGEIVQGVGGSKAVREAWEKERFQPMRRHYERLFEAEPWAKVLVWGEEKEEAKEGNRLVTNKEGRKKNCGVKIEEGRERKR 1309 +D + VD +KKR LP L +G + S+P + PAL LK++ P ++ S P L S ++P ++ + A V H P+P P PP SA ++ VV ++P +S XXXXXXXXXXXXXXXXX + + T + P S ++ P SP KEL RGPPVGNAAGR LIKRGLR GDPRAFI RFQ ENGL IPEA PALQ+LDVLGV RLQVY +L DLRARL +R+DRC D+ QLE+LLA SFGYLT+ EL+++PERII +LE LPM+VKQQ WEAHP LFRRGL +++ Y+ +RASV+MPA+DVVALL RQ+NP +A LV+CVNT+D+ KL+QV + ++++EY SKGDPTLCTLF+DFQV LA RSGRA +I+RLTHLARALEEWVK G VE K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KLP LS AEK+W+KIP+LE ALE+ M YL+ LDA TRWFAKPV E+WP I++AY+AVVPHPMDL +M+KR+KA KE G Y++F AFD DAERVFDNCMAFNP G D DPTVP+ L GRPRVE WG ALMLLADP VL VLGKT+KQ+LDEV++S GLPKDHP +PSLLQLL+LGLDARRQL LV K K P XXXXXX L KKG K G AP PP LPP FSIPDARVS DK+GE AAENDVQEA RTVLPSLLE+ A+V +A KY T+GWEGQPHDK+E++ KMLESVGRLYR+CKARQPSPLLLC+++H+LCHSLAT DD RTTPLAKTLAALLDHLNRK+RSEM LA PD QDR LWI LASAGLLRVP+K KA GA XXXXXXXXXXX PPL+ ELRDL+L +FV QLPF P S+SFCHEQV+RLLLGWMARGA PK ++G +E ++ + V+ WV IVQGVGG KA+ E WEKE F+ +RR YERLFEA PWA+ +V GE G +V+ G GV+ +E ++K+ Sbjct: 100 VDKYKANVDDASKKRGLPALRIGSIEAGRAATEDKKKKIKLVAQAGKSGSQP--IVPALHLKNIAPGNSSGTASVPTILSG----RESVKSRPVVISTDSEAAPVPALHVTASAHIPTPCPFPPVSA--------PSQAAVVASSPVNDRSS--------------XXXXXXXXXXXXXXXXXXXXXXXLHEEATPVPAIPDVASHVKVQPVGSPKSKELVPARGPPVGNAAGRMLIKRGLRAGDPRAFIQRFQEENGLRGIPEARPALQLLDVLGVSRLQVYRHLLADLRARLVDRLDRCQDQAQLERLLAHSFGYLTVPELRTVPERIIXXXXXXXXXXXXXXXXXXGLLEELPMRVKQQVWEAHPALFRRGLGAILEEYVRHRASVMMPAYDVVALL----SLSSTPSPSAAGAPGKEVSPSKRRQENPCLAHLVACVNTEDDSKLDQVASHFIIDEYVSKGDPTLCTLFADFQVQLAHVRSGRAAVISRLTHLARALEEWVKAGRVEAK--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSGLTLKLPRAALSTPVAEKSWAKIPTLEQALEEGMGYLLKLDAPTRWFAKPVLELWPQIQEAYLAVVPHPMDLESMRKRVKASVGGVGEKERGGTAGYSTFAAFDSDAERVFDNCMAFNPPGSAFHSGAERMKKAWGKFKVKFEKTDVKRAMDRKKGAVGAGGLGDGSGLVTKATTSTFVGAGDEAELLSAAGRGTDKARDPTVPEALPGRPRVEAPTWGHALMLLADPCVLQVLGKTLKQELDEVFRSQGLPKDHPRVPSLLQLLYLGLDARRQLALVRLKTKAGVP--XXXXXXXXLHKKGNKKGKTAPSPPELPPCFSIPDARVSFWGFGDKEGEPAAENDVQEAVRTVLPSLLEVNAYVKVANKYATATDGWEGQPHDKDEIEGKMLESVGRLYRACKARQPSPLLLCVLTHALCHSLATGDDDRTTPLAKTLAALLDHLNRKRRSEMTLALPDMQDRALWIGLASAGLLRVPKKKNKAALAGEKANRAGATRAGPVXXXXXXXXXXXXXADRKAHATASTSASARPPLEPELRDLILGIFVNQLPFACSPRSISFCHEQVLRLLLGWMARGALEPPKGKEG---REEGKDGIGKRTVRNWVEGIVQGVGGHKAMWEVWEKEEFKCLRRQYERLFEATPWARGVVLGE------GGAGVVSESAGPD---GVRADESEQQKK 1296
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_638637.1 (hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4] >EAL65286.1 hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4]) HSP 1 Score: 99.8 bits (247), Expect = 6.800e-17 Identity = 70/309 (22.65%), Postives = 142/309 (45.95%), Query Frame = 0 Query: 325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGL--LSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLR-RVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDNPSIAQLVSCVNTDDNDKLEQVVNRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEEWVKEGTVEGKGLIQVQVHLKAILATCDSAT 631 +GN ++ P FI +FQ ENG+ S+P P L +LD+ +PR +Y NL + L+ L +++ ++ +LEKLL Q+F Y+ EL+ IP ++ +L VP FL +LA ++ E P++VK+Q W + LF+ + +++ Y+ D + + R++N + ++V T D + +N+ + +A G+ LC L ++ +++ ++A L+ +++ T++ + + ++Q +L + + +S+T Sbjct: 6 IGNLGSEKILTSLSTTTYPLQFISQFQQENGISKKSLPTVSPVLNLLDLHQIPRGDLYLNLLSSLKKDLLLKIN-TLNKHELEKLLEQTFPYIGFEELQEIPMNVMKRLTPEVPVAFLLKLAEAEELYEQCPIEVKRQIWIVNEELFKEKIKPLINQYI----------EDPIFIQDMNEQLLLSSSTTVDPLFAVSHLPAKRRENNSVLQEMVELFGTKSPDLYQMFINQ-IKRSFADSGNYLLCNLRAEILMAIHDKSIPEIYDTDASHNIAWCLDACIRDNTLDARRIKEIQTNLSSSVHHQNSST 302
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_003283713.1 (hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum] >EGC39727.1 hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum]) HSP 1 Score: 95.5 bits (236), Expect = 1.300e-15 Identity = 54/159 (33.96%), Postives = 91/159 (57.23%), Query Frame = 0 Query: 325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGL--LSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLR-RVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481 +GN+ ++ P FI++FQ ENG+ S+P P L +LD+ VPR ++Y NL T L+ L +++ ++ +LEKLL SF Y++ EL+ IP ++ +L VP FL +L+ ++ E P++VK+Q W P LF+ +V ++ Y+ Sbjct: 6 IGNSGAEKILTSLSNTTYPLQFINQFQQENGISKKSLPTVTPVLNLLDLHQVPRGELYLNLLTSLKKDLLNKIN-TLNKSELEKLLETSFAYISFEELQEIPMNVMRRLTPEVPTAFLLKLSESEELYEQCPIEVKRQIWLVSPQLFKDKVVPLIHQYI 163
BLAST of NO03G04230 vs. NCBI_GenBank
Match: CEO95146.1 (hypothetical protein PBRA_003912 [Plasmodiophora brassicae]) HSP 1 Score: 95.1 bits (235), Expect = 1.700e-15 Identity = 50/151 (33.11%), Postives = 87/151 (57.62%), Query Frame = 0 Query: 330 GRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481 G I + L + +P IH FQ NG L +P +G L+ LD+LG+ R VY +L L+ARL +R + Q+ E LL +SF ++ + EL+ IP ++ + ++P +++D L+ + +LE LP+ + +Q W HP L L+ + + ++ Sbjct: 42 GSLTIHKMLSQHNPVNVIHEFQERNG-LHVPNSGAFLKFLDLLGISRASVYSSLCDKLKARLMQRSSKLAPGQR-EILLQESFRFMRIDELREIPIELLCGMDKIPKKYIDSLSTQAALLETLPLSILRQVWVEHPNLLFMKLIPLYNEFV 190
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_005833089.1 (hypothetical protein GUITHDRAFT_163104 [Guillardia theta CCMP2712] >EKX46109.1 hypothetical protein GUITHDRAFT_163104 [Guillardia theta CCMP2712]) HSP 1 Score: 92.8 bits (229), Expect = 8.400e-15 Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 0 Query: 324 PVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHP--GLFRRGLVGMVDAY 480 PVG G +L + DPR I F +EN L P PA + LD++G+ R + + + T L+ RL +V+ + E++L LL + F Y+++ EL+ IP + L +VP +L LA P +++ LP+ V++Q W P LFR+ G++++Y Sbjct: 8 PVGVQGGNALRECLATAKDPRTAIKNFVSENS-LQTPSCSPAQEWLDLMGISRAEQHKEILTRLKDRLLSKVESMSTEKKL-ALLEKCFPYISIPELRDIPLTLFSNLNKVPVSYLVTLAQSPDLVKELPLSVRRQVWANEPDKALFRKEFNGLLNSY 163
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_013755155.1 (hypothetical protein AMSG_08459 [Thecamonas trahens ATCC 50062] >KNC52596.1 hypothetical protein AMSG_08459 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 87.0 bits (214), Expect = 4.600e-13 Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 0 Query: 343 PRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481 P+ I QAE+G + +P A P L + D L VPR V L L L RV+ E L LLA+SF Y L ++P I+ +L +P F+ LAA P +L P+ V+QQ W A+P LFR L ++ YL Sbjct: 3 PKDMIQELQAEHG-IDVPLAAPVLHLTDTLAVPRAMVLAPLADKLAETLLARVNAAPIE-NLRGLLAESFRYTAHPVLGAVPVAIMARLPSLPQSFIKLLAASPPLLAASPLHVRQQTWAAYPSLFRDHLSALLAPYL 138
BLAST of NO03G04230 vs. NCBI_GenBank
Match: KYQ96921.1 (hypothetical protein DLAC_04241 [Tieghemostelium lacteum]) HSP 1 Score: 84.0 bits (206), Expect = 3.900e-12 Identity = 72/305 (23.61%), Postives = 144/305 (47.21%), Query Frame = 0 Query: 325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGL--LSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLR-RVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDNPSIAQLVSCVNTDDNDKLEQVVNR---YVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTH-LARALEEWVKEGTVEGKGLIQVQVHLKAI 623 +G+ G ++ + P +I +FQ NG+ ++P P L++LD+ + R +Y NLF+ L+ L +V + + ++LE LL Q+F Y+ ELK+IP ++ +L VP +L RLA + E P++VK+Q W + LFR+ + ++ YL + ++ ++++ L R+ N + +L+ + K Q+ N+ Y+ + Y P LCTL S+ + + + T L H A ++ K+ +++ + + ++Q++ ++ Sbjct: 9 IGHLGGEQILTGLSQTTLPLQYIDQFQQNNGIDKSNLPTVTPVLKLLDLHQISRGSLYFNLFSLLKENLLTKVSQ-MNSKELEVLLEQTFPYIGFDELKAIPMTVMKRLTPNVPHVYLLRLAETLDLYEQCPIEVKRQIWLINEDLFRQRIEPLITHYLED-PHLLQDLNELLGL--------------------GEHLPSKRRESNTVLQELLQIIG-----KSPQLYNQLVDYIKKLYQETNTPALCTLRSEI-LMITHDHDIQEIYQTDLAHNFAWCMDACTKDQSMDVRRVKEIQMNFNSL 285
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_014149331.1 (hypothetical protein SARC_12045 [Sphaeroforma arctica JP610] >KNC75429.1 hypothetical protein SARC_12045 [Sphaeroforma arctica JP610]) HSP 1 Score: 83.6 bits (205), Expect = 5.100e-12 Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 0 Query: 328 AAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDR--CTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAW 462 +A + I+ L GDP FI +FQA++GL + AL LDV GVPR ++ + +R +L ER+ + +D L LL +SF Y T EL+ IP I+ +L +P L ++ +I E PM VK++ W Sbjct: 345 SACTNYIEHNLAAGDPIDFIGQFQADSGLKIDHRSLAALPFLDVFGVPRSSLHKSFLESMREKLSERIKKLASSDIDTLNTLLEKSFIYFTHPELQDIPINIMKRLPVIPESILHHISISDEIYEACPMDVKRKVW 480
BLAST of NO03G04230 vs. NCBI_GenBank
Match: PNH00841.1 (Negative elongation factor B [Tetrabaena socialis]) HSP 1 Score: 81.3 bits (199), Expect = 2.500e-11 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 0 Query: 324 PVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERV---DRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAY 480 P+ G+ L++ L PR I Q E L+ P L ML+V+ V R + + + + RL RV D D+ +LE+LLA SF YL M++++ +P ++ +L RVPA L +LAA ++ + LP V++Q WE L + + +V AY Sbjct: 19 PLIGGVGKDLVQEILAAKGPREGIPAVQ-EACLMPYPLVRHLLGMLEVMDVTRFEAHRAVLQRAKERLLSRVAALDCRADKARLERLLAASFPYLGMSDMREVPLAVMERLERVPAPHLKQLAADTEVFKILPPGVQRQVWEYDKNLLQNDALPLVGAY 176
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_004350330.1 (hypothetical protein DFA_11387 [Cavenderia fasciculata] >EGG13626.1 hypothetical protein DFA_11387 [Cavenderia fasciculata]) HSP 1 Score: 76.6 bits (187), Expect = 6.200e-10 Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 0 Query: 325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481 +G++ ++ R P F+ FQ + PAL++LD+ + R +Y L + L L RV + ++E LL QSF Y++ ELK IP ++ + VP RFL +L+ P++ E P++VK+Q W + LFR L+ ++ Y+ Sbjct: 6 IGDSGSDKILNSLSRTTQPIQFLDDFQKQ-------YVQPALKLLDLHQIGRSNLYSQLLSFLSDDLLVRV-KSMHPNEMEALLDQSFPYISFDELKGIPMNVMKLMPEVPYRFLKKLSETPELYEQCPIEVKRQIWLINETLFREKLLPLIMQYV 153 The following BLAST results are available for this feature:
BLAST of NO03G04230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04230 ID=NO03G04230|Name=NO03G04230|organism=Nannochloropsis oceanica|type=gene|length=4007bpback to top protein sequence of NO03G04230.1 >NO03G04230.1-protein ID=NO03G04230.1-protein|Name=NO03G04230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1309bpback to top Synonyms
Publications
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