NO03G04230, NO03G04230 (gene) Nannochloropsis oceanica

Overview
NameNO03G04230
Unique NameNO03G04230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4007
Alignment locationchr3:1220275..1224281 -

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Properties
Property NameValue
DescriptionNegative elongation factor b-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1220275..1224281 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
GO:0045892negative regulation of transcription, DNA-templated
GO:0006414translational elongation
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003746translation elongation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR010405COBRA1
IPR001487Bromodomain
Homology
BLAST of NO03G04230 vs. NCBI_GenBank
Match: EWM29855.1 (negative elongation factor b-like protein [Nannochloropsis gaditana])

HSP 1 Score: 932.9 bits (2410), Expect = 1.100e-267
Identity = 656/1263 (51.94%), Postives = 776/1263 (61.44%), Query Frame = 0
Query:  107 MDGSECVVDGDTKKRALPKLSLGXXXXXXXXXXXXXXXXXXAPPVTITASKPPGVGPALTLKSLVPEATASETSAPVRLKWGVALNSSATAKPKLVVGTTNRATVTTAHAP-----PSPLPQPPSSATLLRSPTPSTRMEVVVATPAVQTTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSTQPILKRKTFITNTP--KSSIRTLPSTSP--KELTQIRGPPVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDNPSIAQLVSCVNTDDNDKLEQVVNRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEEWVKEGTVEGKGLIQVQVHLKAILATCDSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLP-GNLSAAAAEKAWSKIPSLENALEDSMNYLINLDADTRWFAKPVWEVWPDIEQAYIAVVPHPMDLGTMKKRIKAG------KEGGHGGFYTSFEAFDKDAERVFDNCMAFNPVGK----------------------------RDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTVPQPLQGRPRVEGQMWGQALMLLADPFVLHVLGKTVKQQLDEVYKSHGLPKDHPLLPSLLQLLFLGLDARRQLVLVLHKHKTPGPXXXXXXXXMLLAKKGGKAGNVAPRPPNLPPGFSIPDARVSPLLVRDKDGELAAENDVQEAARTVLPSLLEIFAHVNLAQKYEGTTEGWEGQPHDKEEVQEKMLESVGRLYRSCKARQPSPLLLCMVSHSLCHSLATADDARTTPLAKTLAALLDHLNRKKRSEMLLATPDPQDRGLWICLASAGLLRVPRK---------KARVTGA--------XXXXXXXXXXXXXXXXXXXXXXXXXXXPPLDHELRDLLLSLFVKQLPFIPEPCSLSFCHEQVMRLLLGWMARGAFLKPKRRDGGGEADEEREKKEENAVKLWVGEIVQGVGGSKAVREAWEKERFQPMRRHYERLFEAEPWAKVLVWGEEKEEAKEGNRLVTNKEGRKKNCGVKIEEGRERKR 1309
            +D  +  VD  +KKR LP L +G                        + S+P  + PAL LK++ P  ++   S P  L        S  ++P ++   +  A V   H       P+P P PP SA         ++  VV ++P    +S              XXXXXXXXXXXXXXXXX      + +  T +   P   S ++  P  SP  KEL   RGPPVGNAAGR LIKRGLR GDPRAFI RFQ ENGL  IPEA PALQ+LDVLGV RLQVY +L  DLRARL +R+DRC D+ QLE+LLA SFGYLT+ EL+++PERII                   +LE LPM+VKQQ WEAHP LFRRGL  +++ Y+ +RASV+MPA+DVVALL                           RQ+NP +A LV+CVNT+D+ KL+QV + ++++EY SKGDPTLCTLF+DFQV LA  RSGRA +I+RLTHLARALEEWVK G VE K                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       KLP   LS   AEK+W+KIP+LE ALE+ M YL+ LDA TRWFAKPV E+WP I++AY+AVVPHPMDL +M+KR+KA       KE G    Y++F AFD DAERVFDNCMAFNP G                              D                                               DPTVP+ L GRPRVE   WG ALMLLADP VL VLGKT+KQ+LDEV++S GLPKDHP +PSLLQLL+LGLDARRQL LV  K K   P  XXXXXX  L KKG K G  AP PP LPP FSIPDARVS     DK+GE AAENDVQEA RTVLPSLLE+ A+V +A KY   T+GWEGQPHDK+E++ KMLESVGRLYR+CKARQPSPLLLC+++H+LCHSLAT DD RTTPLAKTLAALLDHLNRK+RSEM LA PD QDR LWI LASAGLLRVP+K         KA   GA        XXXXXXXXXXX                PPL+ ELRDL+L +FV QLPF   P S+SFCHEQV+RLLLGWMARGA   PK ++G    +E ++   +  V+ WV  IVQGVGG KA+ E WEKE F+ +RR YERLFEA PWA+ +V GE       G  +V+   G     GV+ +E  ++K+
Sbjct:  100 VDKYKANVDDASKKRGLPALRIGSIEAGRAATEDKKKKIKLVAQAGKSGSQP--IVPALHLKNIAPGNSSGTASVPTILSG----RESVKSRPVVISTDSEAAPVPALHVTASAHIPTPCPFPPVSA--------PSQAAVVASSPVNDRSS--------------XXXXXXXXXXXXXXXXXXXXXXXLHEEATPVPAIPDVASHVKVQPVGSPKSKELVPARGPPVGNAAGRMLIKRGLRAGDPRAFIQRFQEENGLRGIPEARPALQLLDVLGVSRLQVYRHLLADLRARLVDRLDRCQDQAQLERLLAHSFGYLTVPELRTVPERIIXXXXXXXXXXXXXXXXXXGLLEELPMRVKQQVWEAHPALFRRGLGAILEEYVRHRASVMMPAYDVVALL----SLSSTPSPSAAGAPGKEVSPSKRRQENPCLAHLVACVNTEDDSKLDQVASHFIIDEYVSKGDPTLCTLFADFQVQLAHVRSGRAAVISRLTHLARALEEWVKAGRVEAK--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSGLTLKLPRAALSTPVAEKSWAKIPTLEQALEEGMGYLLKLDAPTRWFAKPVLELWPQIQEAYLAVVPHPMDLESMRKRVKASVGGVGEKERGGTAGYSTFAAFDSDAERVFDNCMAFNPPGSAFHSGAERMKKAWGKFKVKFEKTDVKRAMDRKKGAVGAGGLGDGSGLVTKATTSTFVGAGDEAELLSAAGRGTDKARDPTVPEALPGRPRVEAPTWGHALMLLADPCVLQVLGKTLKQELDEVFRSQGLPKDHPRVPSLLQLLYLGLDARRQLALVRLKTKAGVP--XXXXXXXXLHKKGNKKGKTAPSPPELPPCFSIPDARVSFWGFGDKEGEPAAENDVQEAVRTVLPSLLEVNAYVKVANKYATATDGWEGQPHDKDEIEGKMLESVGRLYRACKARQPSPLLLCVLTHALCHSLATGDDDRTTPLAKTLAALLDHLNRKRRSEMTLALPDMQDRALWIGLASAGLLRVPKKKNKAALAGEKANRAGATRAGPVXXXXXXXXXXXXXADRKAHATASTSASARPPLEPELRDLILGIFVNQLPFACSPRSISFCHEQVLRLLLGWMARGALEPPKGKEG---REEGKDGIGKRTVRNWVEGIVQGVGGHKAMWEVWEKEEFKCLRRQYERLFEATPWARGVVLGE------GGAGVVSESAGPD---GVRADESEQQKK 1296          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_638637.1 (hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4] >EAL65286.1 hypothetical protein DDB_G0284195 [Dictyostelium discoideum AX4])

HSP 1 Score: 99.8 bits (247), Expect = 6.800e-17
Identity = 70/309 (22.65%), Postives = 142/309 (45.95%), Query Frame = 0
Query:  325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGL--LSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLR-RVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDNPSIAQLVSCVNTDDNDKLEQVVNRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEEWVKEGTVEGKGLIQVQVHLKAILATCDSAT 631
            +GN     ++        P  FI +FQ ENG+   S+P   P L +LD+  +PR  +Y NL + L+  L  +++   ++ +LEKLL Q+F Y+   EL+ IP  ++ +L   VP  FL +LA   ++ E  P++VK+Q W  +  LF+  +  +++ Y+           D + +                            R++N  + ++V    T   D  +  +N+ +   +A  G+  LC L ++  +++               ++A  L+  +++ T++ + + ++Q +L + +   +S+T
Sbjct:    6 IGNLGSEKILTSLSTTTYPLQFISQFQQENGISKKSLPTVSPVLNLLDLHQIPRGDLYLNLLSSLKKDLLLKIN-TLNKHELEKLLEQTFPYIGFEELQEIPMNVMKRLTPEVPVAFLLKLAEAEELYEQCPIEVKRQIWIVNEELFKEKIKPLINQYI----------EDPIFIQDMNEQLLLSSSTTVDPLFAVSHLPAKRRENNSVLQEMVELFGTKSPDLYQMFINQ-IKRSFADSGNYLLCNLRAEILMAIHDKSIPEIYDTDASHNIAWCLDACIRDNTLDARRIKEIQTNLSSSVHHQNSST 302          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_003283713.1 (hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum] >EGC39727.1 hypothetical protein DICPUDRAFT_52489 [Dictyostelium purpureum])

HSP 1 Score: 95.5 bits (236), Expect = 1.300e-15
Identity = 54/159 (33.96%), Postives = 91/159 (57.23%), Query Frame = 0
Query:  325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGL--LSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLR-RVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481
            +GN+    ++        P  FI++FQ ENG+   S+P   P L +LD+  VPR ++Y NL T L+  L  +++   ++ +LEKLL  SF Y++  EL+ IP  ++ +L   VP  FL +L+   ++ E  P++VK+Q W   P LF+  +V ++  Y+
Sbjct:    6 IGNSGAEKILTSLSNTTYPLQFINQFQQENGISKKSLPTVTPVLNLLDLHQVPRGELYLNLLTSLKKDLLNKIN-TLNKSELEKLLETSFAYISFEELQEIPMNVMRRLTPEVPTAFLLKLSESEELYEQCPIEVKRQIWLVSPQLFKDKVVPLIHQYI 163          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: CEO95146.1 (hypothetical protein PBRA_003912 [Plasmodiophora brassicae])

HSP 1 Score: 95.1 bits (235), Expect = 1.700e-15
Identity = 50/151 (33.11%), Postives = 87/151 (57.62%), Query Frame = 0
Query:  330 GRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481
            G   I + L + +P   IH FQ  NG L +P +G  L+ LD+LG+ R  VY +L   L+ARL +R  +    Q+ E LL +SF ++ + EL+ IP  ++  + ++P +++D L+ +  +LE LP+ + +Q W  HP L    L+ + + ++
Sbjct:   42 GSLTIHKMLSQHNPVNVIHEFQERNG-LHVPNSGAFLKFLDLLGISRASVYSSLCDKLKARLMQRSSKLAPGQR-EILLQESFRFMRIDELREIPIELLCGMDKIPKKYIDSLSTQAALLETLPLSILRQVWVEHPNLLFMKLIPLYNEFV 190          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_005833089.1 (hypothetical protein GUITHDRAFT_163104 [Guillardia theta CCMP2712] >EKX46109.1 hypothetical protein GUITHDRAFT_163104 [Guillardia theta CCMP2712])

HSP 1 Score: 92.8 bits (229), Expect = 8.400e-15
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 0
Query:  324 PVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHP--GLFRRGLVGMVDAY 480
            PVG   G +L +      DPR  I  F +EN  L  P   PA + LD++G+ R + +  + T L+ RL  +V+  + E++L  LL + F Y+++ EL+ IP  +   L +VP  +L  LA  P +++ LP+ V++Q W   P   LFR+   G++++Y
Sbjct:    8 PVGVQGGNALRECLATAKDPRTAIKNFVSENS-LQTPSCSPAQEWLDLMGISRAEQHKEILTRLKDRLLSKVESMSTEKKL-ALLEKCFPYISIPELRDIPLTLFSNLNKVPVSYLVTLAQSPDLVKELPLSVRRQVWANEPDKALFRKEFNGLLNSY 163          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_013755155.1 (hypothetical protein AMSG_08459 [Thecamonas trahens ATCC 50062] >KNC52596.1 hypothetical protein AMSG_08459 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 87.0 bits (214), Expect = 4.600e-13
Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  343 PRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481
            P+  I   QAE+G + +P A P L + D L VPR  V   L   L   L  RV+    E  L  LLA+SF Y     L ++P  I+ +L  +P  F+  LAA P +L   P+ V+QQ W A+P LFR  L  ++  YL
Sbjct:    3 PKDMIQELQAEHG-IDVPLAAPVLHLTDTLAVPRAMVLAPLADKLAETLLARVNAAPIE-NLRGLLAESFRYTAHPVLGAVPVAIMARLPSLPQSFIKLLAASPPLLAASPLHVRQQTWAAYPSLFRDHLSALLAPYL 138          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: KYQ96921.1 (hypothetical protein DLAC_04241 [Tieghemostelium lacteum])

HSP 1 Score: 84.0 bits (206), Expect = 3.900e-12
Identity = 72/305 (23.61%), Postives = 144/305 (47.21%), Query Frame = 0
Query:  325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGL--LSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLR-RVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDNPSIAQLVSCVNTDDNDKLEQVVNR---YVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTH-LARALEEWVKEGTVEGKGLIQVQVHLKAI 623
            +G+  G  ++    +   P  +I +FQ  NG+   ++P   P L++LD+  + R  +Y NLF+ L+  L  +V +  + ++LE LL Q+F Y+   ELK+IP  ++ +L   VP  +L RLA    + E  P++VK+Q W  +  LFR+ +  ++  YL +   ++   ++++ L                            R+ N  + +L+  +      K  Q+ N+   Y+ + Y     P LCTL S+  + +      +    T L H  A  ++   K+ +++ + + ++Q++  ++
Sbjct:    9 IGHLGGEQILTGLSQTTLPLQYIDQFQQNNGIDKSNLPTVTPVLKLLDLHQISRGSLYFNLFSLLKENLLTKVSQ-MNSKELEVLLEQTFPYIGFDELKAIPMTVMKRLTPNVPHVYLLRLAETLDLYEQCPIEVKRQIWLINEDLFRQRIEPLITHYLED-PHLLQDLNELLGL--------------------GEHLPSKRRESNTVLQELLQIIG-----KSPQLYNQLVDYIKKLYQETNTPALCTLRSEI-LMITHDHDIQEIYQTDLAHNFAWCMDACTKDQSMDVRRVKEIQMNFNSL 285          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_014149331.1 (hypothetical protein SARC_12045 [Sphaeroforma arctica JP610] >KNC75429.1 hypothetical protein SARC_12045 [Sphaeroforma arctica JP610])

HSP 1 Score: 83.6 bits (205), Expect = 5.100e-12
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 0
Query:  328 AAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDR--CTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAW 462
            +A  + I+  L  GDP  FI +FQA++GL     +  AL  LDV GVPR  ++ +    +R +L ER+ +   +D   L  LL +SF Y T  EL+ IP  I+ +L  +P   L  ++   +I E  PM VK++ W
Sbjct:  345 SACTNYIEHNLAAGDPIDFIGQFQADSGLKIDHRSLAALPFLDVFGVPRSSLHKSFLESMREKLSERIKKLASSDIDTLNTLLEKSFIYFTHPELQDIPINIMKRLPVIPESILHHISISDEIYEACPMDVKRKVW 480          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: PNH00841.1 (Negative elongation factor B [Tetrabaena socialis])

HSP 1 Score: 81.3 bits (199), Expect = 2.500e-11
Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 0
Query:  324 PVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERV---DRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAY 480
            P+    G+ L++  L    PR  I   Q E  L+  P     L ML+V+ V R + +  +    + RL  RV   D   D+ +LE+LLA SF YL M++++ +P  ++ +L RVPA  L +LAA  ++ + LP  V++Q WE    L +   + +V AY
Sbjct:   19 PLIGGVGKDLVQEILAAKGPREGIPAVQ-EACLMPYPLVRHLLGMLEVMDVTRFEAHRAVLQRAKERLLSRVAALDCRADKARLERLLAASFPYLGMSDMREVPLAVMERLERVPAPHLKQLAADTEVFKILPPGVQRQVWEYDKNLLQNDALPLVGAY 176          
BLAST of NO03G04230 vs. NCBI_GenBank
Match: XP_004350330.1 (hypothetical protein DFA_11387 [Cavenderia fasciculata] >EGG13626.1 hypothetical protein DFA_11387 [Cavenderia fasciculata])

HSP 1 Score: 76.6 bits (187), Expect = 6.200e-10
Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 0
Query:  325 VGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYL 481
            +G++    ++    R   P  F+  FQ +          PAL++LD+  + R  +Y  L + L   L  RV +     ++E LL QSF Y++  ELK IP  ++  +  VP RFL +L+  P++ E  P++VK+Q W  +  LFR  L+ ++  Y+
Sbjct:    6 IGDSGSDKILNSLSRTTQPIQFLDDFQKQ-------YVQPALKLLDLHQIGRSNLYSQLLSFLSDDLLVRV-KSMHPNEMEALLDQSFPYISFDELKGIPMNVMKLMPEVPYRFLKKLSETPELYEQCPIEVKRQIWLINETLFREKLLPLIMQYV 153          
The following BLAST results are available for this feature:
BLAST of NO03G04230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29855.11.100e-26751.94negative elongation factor b-like protein [Nannoch... [more]
XP_638637.16.800e-1722.65hypothetical protein DDB_G0284195 [Dictyostelium d... [more]
XP_003283713.11.300e-1533.96hypothetical protein DICPUDRAFT_52489 [Dictyosteli... [more]
CEO95146.11.700e-1533.11hypothetical protein PBRA_003912 [Plasmodiophora b... [more]
XP_005833089.18.400e-1533.54hypothetical protein GUITHDRAFT_163104 [Guillardia... [more]
XP_013755155.14.600e-1338.41hypothetical protein AMSG_08459 [Thecamonas trahen... [more]
KYQ96921.13.900e-1223.61hypothetical protein DLAC_04241 [Tieghemostelium l... [more]
XP_014149331.15.100e-1236.03hypothetical protein SARC_12045 [Sphaeroforma arct... [more]
PNH00841.12.500e-1133.33Negative elongation factor B [Tetrabaena socialis][more]
XP_004350330.16.200e-1030.77hypothetical protein DFA_11387 [Cavenderia fascicu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005472NSK005472Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04230.1NO03G04230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572896gene_1620Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g6gene781Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04230.1NO03G04230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04230 ID=NO03G04230|Name=NO03G04230|organism=Nannochloropsis oceanica|type=gene|length=4007bp
ATGGAAGCAGCAGGAGAGGATGACAAGAAACCCCCCGATGCCAGCTTCAG
CAAACCAATATTCCTTTCTGTCCCCGAGAGCAGTGCTCCTGGCCCGACCG
TCCTCAAGCTACGAGCCACCGCCTTGACAGCCTCAGCTTCCGGCGGGTCC
TTGTCCGAAGCCAAATTGATGGACTCATCAAATAAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCGACGGTCGAGGGGGGAGACAGTGGCAACCGTGTCC
ATGTCGATGGAAAGCAGCGTGTGCTGCCGACACTCCGAAAGGGGTCACCC
ACACAAACCACAGGTGCGATGGACGGAAGCGAATGTGTTGTCGATGGAGA
TACCAAGAAACGGGCATTGCCGAAGTTGAGTCTAGGTGGCGGTGGCAGCG
GTGGCGGAGGAGAAACAGGAGGGAAGAAACTTAAATTGATTGCCCCGCCC
GTGACGATTACAGCAAGCAAGCCGCCAGGCGTTGGTCCAGCCCTCACTTT
GAAGAGCCTTGTGCCTGAAGCTACAGCTAGTGAAACAAGCGCACCCGTGC
GGCTTAAATGGGGTGTTGCCCTCAATTCCTCTGCCACAGCAAAGCCCAAG
CTAGTTGTAGGGACGACAAATAGAGCAACAGTTACAACCGCGCACGCCCC
ACCATCTCCTCTTCCTCAGCCTCCGTCATCTGCTACTCTTCTGCGATCAC
CCACCCCTTCCACGCGCATGGAAGTAGTGGTAGCAACCCCTGCAGTCCAG
ACAACATCTCCCTCCGACACTGCCTCCACTCCTATATCCGTAATGACCGC
AGCAAAAGCATCAGCAGCTGCTGCTGAAATTCCACTCAGCCCAGCCCCTG
CCGCACTTTCCACACAGCCAATCCTCAAGAGGAAAACATTTATAACAAAC
ACCCCCAAGTCATCCATCCGCACCTTGCCTTCTACCAGCCCCAAGGAGCT
GACGCAGATCCGTGGTCCCCCAGTCGGAAACGCCGCCGGCCGGTCGCTTA
TCAAAAGAGGGCTGCGGGAAGGTGACCCCCGCGCGTTCATCCATCGTTTT
CAAGCGGAGAATGGTCTATTGTCCATTCCAGAAGCGGGGCCTGCACTGCA
GATGCTTGATGTGCTGGGTGTCCCTCGATTGCAAGTGTACCATAATTTAT
TTACTGATCTCCGGGCACGTTTGGAGGAGAGAGTGGATAGGTGTACGGAT
GAACAACAGCTGGAGAAGTTGTTGGCACAGAGCTTCGGGTATTTGACGAT
GGCGGAGCTGAAGTCAATCCCGGAGAGAATAATTGTAAAACTACGACGAG
TGCCGGCTCGATTTCTGGACCGACTGGCGGCGCGTCCGCAGATTCTGGAG
GGGCTGCCGATGAAAGTGAAGCAACAGGCGTGGGAGGCGCATCCAGGGTT
GTTTCGAAGGGGGTTGGTGGGTATGGTGGATGCATATTTGGGGAATCGAG
CCTCGGTTGTCATGCCGGCACATGATGTGGTCGCGTTGCTTTCCTTGAGC
AGCAGTAGCAATAGGAGCAGTAACAGCAGCAGTAGCAGTAGCAGCAGCAA
GGGGGTCAATACCAATAAACGGAGGCAGGATAACCCGTCCATTGCCCAAC
TCGTGTCCTGTGTTAATACTGACGATAATGACAAACTCGAGCAAGTCGTC
AATCGCTATGTCCTAGAGGAGTACGCGTCGAAGGGGGACCCCACCCTCTG
CACCCTCTTTTCCGACTTCCAAGTCTCCCTCGCTCAAGCCCGGTCAGGCC
GTGCCACCATCATCACGCGCCTCACCCACTTAGCACGTGCCCTGGAAGAG
TGGGTGAAGGAGGGAACAGTCGAAGGGAAGGGCTTGATTCAAGTCCAGGT
GCACCTAAAGGCAATTCTTGCCACTTGTGACTCAGCGACCGCGGCGGCAC
AGGAGAAGCGAGTAGCGGCTGCAGGGAATGGAGCTGGAGGGGTGACAGCG
AAGGCAAAGGGAAAAAAGAAGACTAAAATGCCCACAACTGATCCTACTAC
TGGTAACGGCAGCAGTAGCAGCATTGGCCTGACCCTCAAACTCCCCGGGA
ACCTCTCAGCCGCAGCTGCTGAGAAGGCTTGGTCCAAAATCCCGTCTCTC
GAAAACGCCCTCGAGGACTCGATGAATTATTTAATTAATCTCGATGCAGA
CACCCGATGGTTCGCTAAGCCTGTGTGGGAAGTGTGGCCTGACATAGAGC
AGGCCTACATAGCCGTTGTCCCTCACCCTATGGACCTGGGGACGATGAAA
AAGAGAATCAAGGCGGGAAAGGAGGGAGGTCACGGAGGATTCTATACCAG
TTTTGAGGCATTCGATAAGGACGCGGAGAGAGTGTTTGACAACTGCATGG
CCTTCAACCCCGTTGGAAgtacgttttatgtgggagcggagaggatgaag
aagaactggatgaaatataaggtaaaattcaaaaatgtggatgtgaagAG
CGCGATGGAGAAGAGGAAGAGTTGGGGGGGGGAGGAGGAGGGGCAGGCGG
AGGTGGGGGGGATTTGGTGAGTAAGGCGACGACGTCGACATTTGTGAGTA
CCGGGGAGGACATCGGTGGTGGAGGAGGAGGAGGGGGAGGAGGGAGGGAT
CCGACGGTGCCGCAACCATTGCAGGGACGGCCGAGGGTGGAAGGGCAGAT
GTGGGGGCAGGCACTAATGTTGTTGGCTGACCCCTTCGTGTTGCATGTGT
TGGGCAAGACAGTGAAGCAACAGCTGGACGAGGTGTATAAATCACATGGC
CTCCCCAAGGATCACCCTCTCCTTCCCTCCCTTCTTCAACTCCTCTTCCT
GGGACTAGATGCCCGCCGACAACTAGTACTAGTGCTTCACAAGCACAAAA
CCCCCGGCCCTCCCGCCCCTCCCGCCACCCCTACTATGCTCTTGGCGAAG
AAGGGAGGGAAGGCAGGCAATGTCGCCCCGCGCCCCCCTAATCTTCCTCC
AGGGTTTTCGATCCCTGACGCAAGAGTTAGTCCGTTACTGGTCCGAGACA
AGGATGGAGAGCTCGCGGCTGAGAATGATGTACAAGAAGCTGCTCGAACT
GTTTTACCCAGCTTATTAGAAATATTTGCGCATGTGAACCTAGCACAGAA
ATACGAGGGAACGACGGAGGGATGGGAGGGGCAGCCGCATGACAAGGAGG
AGGTACAGGAAAAGATGCTTGAGAGCGTGGGGAGGTTATACCGATCGTGT
AAAGCTAGGCAGCCTTCTCCGCTTTTGTTGTGCATGGTAAGTCATTCATT
GTGTCATAGCCTCGCGACTGCTGATGATGCAAGGACGACCCCTCTAGCCA
AGACCCTGGCAGCACTGCTCGATCACTTGAACCGGAAAAAGAGGAGTGAG
ATGCTGCTTGCAACACCCGACCCCCAGGACCGGGGCCTGTGGATTTGTCT
GGCGAGCGCCGGTTTGTTAAGAGTGCCGAGAAAGAAGGCCAGGGTAACAG
GAGCAGCACCAGCAGCAGTGGCAGCCAAGGCGGCAGGTGGTGCTGCTGTC
AATACTTCTGCAGCGACGACCACAGCCTCGACGCGTCCTCCCTTGGATCA
CGAACTTCGCGATTTGTTATTATCTCTGTTTGTGAAGCAGCTACCATTTA
TACCTGAGCCTTGTTCTTTGTCATTTTGTCACGAGCAGGTTATGCGGTTG
TTGTTGGGCTGGATGGCGCGAGGGGCGTTTCTTAAGCCGAAGAGGAGGGA
TGGAGGAGGGGAGGCCGACGAGGAGAGGGAGAAGAAAGAGGAGAATGCGG
TGAAGCTGTGGGTTGGGGAAATTGTGCAAGGAGTGGGCGGATCGAAGGCG
GTAAGGGAGGCATGGGAAAAGGAAAGATTCCAACCCATGAGAAGGCACTA
TGAAAGATTGTTTGAGGCGGAGCCTTGGGCAAAAGTGTTGGTATGGGGGG
AGGAAAAGGAGGAGGCGAAGGAGGGAAACAGGTTGGTGACGAACAAGGAA
GGAAGAAAGAAAAATTGTGGGGTGAAGATCGAGGAGGGAAGGGAGAGGAA
GAGATAG
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protein sequence of NO03G04230.1

>NO03G04230.1-protein ID=NO03G04230.1-protein|Name=NO03G04230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1309bp
MEAAGEDDKKPPDASFSKPIFLSVPESSAPGPTVLKLRATALTASASGGS
LSEAKLMDSSNKAAAAAAAAAATVEGGDSGNRVHVDGKQRVLPTLRKGSP
TQTTGAMDGSECVVDGDTKKRALPKLSLGGGGSGGGGETGGKKLKLIAPP
VTITASKPPGVGPALTLKSLVPEATASETSAPVRLKWGVALNSSATAKPK
LVVGTTNRATVTTAHAPPSPLPQPPSSATLLRSPTPSTRMEVVVATPAVQ
TTSPSDTASTPISVMTAAKASAAAAEIPLSPAPAALSTQPILKRKTFITN
TPKSSIRTLPSTSPKELTQIRGPPVGNAAGRSLIKRGLREGDPRAFIHRF
QAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTD
EQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILE
GLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLSLS
SSSNRSSNSSSSSSSSKGVNTNKRRQDNPSIAQLVSCVNTDDNDKLEQVV
NRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEE
WVKEGTVEGKGLIQVQVHLKAILATCDSATAAAQEKRVAAAGNGAGGVTA
KAKGKKKTKMPTTDPTTGNGSSSSIGLTLKLPGNLSAAAAEKAWSKIPSL
ENALEDSMNYLINLDADTRWFAKPVWEVWPDIEQAYIAVVPHPMDLGTMK
KRIKAGKEGGHGGFYTSFEAFDKDAERVFDNCMAFNPVGKRDGEEEELGG
GGGGAGGGGGDLVSKATTSTFVSTGEDIGGGGGGGGGGRDPTVPQPLQGR
PRVEGQMWGQALMLLADPFVLHVLGKTVKQQLDEVYKSHGLPKDHPLLPS
LLQLLFLGLDARRQLVLVLHKHKTPGPPAPPATPTMLLAKKGGKAGNVAP
RPPNLPPGFSIPDARVSPLLVRDKDGELAAENDVQEAARTVLPSLLEIFA
HVNLAQKYEGTTEGWEGQPHDKEEVQEKMLESVGRLYRSCKARQPSPLLL
CMVSHSLCHSLATADDARTTPLAKTLAALLDHLNRKKRSEMLLATPDPQD
RGLWICLASAGLLRVPRKKARVTGAAPAAVAAKAAGGAAVNTSAATTTAS
TRPPLDHELRDLLLSLFVKQLPFIPEPCSLSFCHEQVMRLLLGWMARGAF
LKPKRRDGGGEADEEREKKEENAVKLWVGEIVQGVGGSKAVREAWEKERF
QPMRRHYERLFEAEPWAKVLVWGEEKEEAKEGNRLVTNKEGRKKNCGVKI
EEGRERKR*
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Synonyms
Publications