Naga_100017g6, gene781 (gene) Nannochloropsis gaditana

Overview
NameNaga_100017g6
Unique Namegene781
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:485295..489325 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100017g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:485295..489325 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008135translation factor activity, RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL048ngnoL048Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04230NO03G04230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna815rna815-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna815rna815Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna815

>rna815-protein ID=rna815-protein|Name=rna815|organism=Nannochloropsis gaditana|type=polypeptide|length=1308bp
MDTGRGADGNPTGGDTKPVLLPPVASKKSPAGQQPFPKLKVTTPATSTPQ
DTPLRLSMSSDAVQDSKRDVPIAAGKKSLSSLSEKVSLPEAASGTGIALV
DKYKANVDDASKKRGLPALRIGSIEAGRAATEDKKKKIKLVAQAGKSGSQ
PIVPALHLKNIAPGNSSGTASVPTILSGRESVKSRPVVISTDSEAAPVPA
LHVTASAHIPTPCPFPPVSAPSQAAVVASSPVNDRSSPAMAPLPPPSPSS
APMAGSSDPALHEEATPVPAIPDVASHVKVQPVGSPKSKELVPARGPPVG
NAAGRMLIKRGLRAGDPRAFIQRFQEENGLRGIPEARPALQLLDVLGVSR
LQVYRHLLADLRARLVDRLDRCQDQAQLERLLAHSFGYLTVPELRTVPER
IITKLRRIPSRILDRLAARPGLLEELPMRVKQQVWEAHPALFRRGLGAIL
EEYVRHRASVMMPAYDVVALLSLSSTPSPSAAGAPGKEVSPSKRRQENPC
LAHLVACVNTEDDSKLDQVASHFIIDEYVSKGDPTLCTLFADFQVQLAHV
RSGRAAVISRLTHLARALEEWVKAGRVEAKALAQVQVHLRAMLSSSGTGA
GRGVTPMSLSSKKEKKRKEADITSSGLTLKLPRAALSTPVAEKSWAKIPT
LEQALEEGMGYLLKLDAPTRWFAKPVLELWPQIQEAYLAVVPHPMDLESM
RKRVKASVGGVGEKERGGTAGYSTFAAFDSDAERVFDNCMAFNPPGSAFH
SGAERMKKAWGKFKVKFEKTDVKRAMDRKKGAVGAGGLGDGSGLVTKATT
STFVGAGDEAELLSAAGRGTDKARDPTVPEALPGRPRVEAPTWGHALMLL
ADPCVLQVLGKTLKQELDEVFRSQGLPKDHPRVPSLLQLLYLGLDARRQL
ALVRLKTKAGVPPPPPPTEPLHKKGNKKGKTAPSPPELPPCFSIPDARVS
FWGFGDKEGEPAAENDVQEAVRTVLPSLLEVNAYVKVANKYATATDGWEG
QPHDKDEIEGKMLESVGRLYRACKARQPSPLLLCVLTHALCHSLATGDDD
RTTPLAKTLAALLDHLNRKRRSEMTLALPDMQDRALWIGLASAGLLRVPK
KKNKAALAGEKANRAGATRAGPVGAGMPAVGGAGVGADRKAHATASTSAS
ARPPLEPELRDLILGIFVNQLPFACSPRSISFCHEQVLRLLLGWMARGAL
EPPKGKEGREEGKDGIGKRTVRNWVEGIVQGVGGHKAMWEVWEKEEFKCL
RRQYERLFEATPWARGVVLGEGGAGVVSESAGPDGVRADESEQQKKMEPL
GGKAADDK
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Synonyms
Publications