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Properties
| Property Name | Value |
|---|
| Product | negative elongation factor b-like protein |
| Orig transcript id | gnl|cribi|Naga_100017g6.353.mrna |
| Orig protein id | gnl|cribi|Naga_100017g6.353 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:485295..489325 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna815 ID=rna815|Name=rna815|organism=Nannochloropsis gaditana|type=mRNA|length=738bp
ATGTTTCAACTTGCTGTAATCCGCGACACTATAAAAGTTCCTCCGGCCTC
TTTCAATCGTAACCAGATCGAGGTCTTGACAGAGGAAGTGGATCGAAAGT
ATGCCAATCGTATCGTCATGAATGTCGGGCTAGGTGTATGTCTGTATGAT
TTCGTTGACATCGGTGACGCTTACCTTTACCCCTCGGATGGTGCGGCTCA
CCACAGGGTCACGTTCCGTTTGATGGTGTTCAGACCTTTCATAGGAGAGG
TTCTGGTAGGAAGAGTCAAACAATGTAGCGAAAATGGCATCAAAATAAGT
TTGGGATTTTTCGATGACATTTTTGTGCCATCTTATCTTTTGCAAACACC
CTCCGAGTTCGACCCCAGAGAGAACGTGTGGGTCTGGTCCTACAGCAGTG
ACGAACCTGGAGAGCCCGCTGTGCGCTACCCCATGGAAGTGGATGAATTC
ATCCGCTTTCGCGTCCGGTCTGTGAACTTCACACATACCAAATACAGCGG
CAGTGGTGGGAGTGGGGCGGTCGGGGGCCTCGGCAATGTGGCGACAGGGC
CCGTAGGAACGGTAGGCAATCCTGTGAATCCGAAGGTAGAGGTAGAGGGA
GGGGGGTTAGGGCAAGTTCGACGTCCGCGCAGCGACACGTTGACGGGAGA
CGAAAGTGTCGGGGGCCCTTTGCCACCTATGCAGTTGCTGGGTACAACGA
ACGAGGATGGTCTGGGCATGCTGGCGTGGTGGGGATAG back to topprotein sequence of rna815 >rna815-protein ID=rna815-protein|Name=rna815|organism=Nannochloropsis gaditana|type=polypeptide|length=1308bp
MDTGRGADGNPTGGDTKPVLLPPVASKKSPAGQQPFPKLKVTTPATSTPQ
DTPLRLSMSSDAVQDSKRDVPIAAGKKSLSSLSEKVSLPEAASGTGIALV
DKYKANVDDASKKRGLPALRIGSIEAGRAATEDKKKKIKLVAQAGKSGSQ
PIVPALHLKNIAPGNSSGTASVPTILSGRESVKSRPVVISTDSEAAPVPA
LHVTASAHIPTPCPFPPVSAPSQAAVVASSPVNDRSSPAMAPLPPPSPSS
APMAGSSDPALHEEATPVPAIPDVASHVKVQPVGSPKSKELVPARGPPVG
NAAGRMLIKRGLRAGDPRAFIQRFQEENGLRGIPEARPALQLLDVLGVSR
LQVYRHLLADLRARLVDRLDRCQDQAQLERLLAHSFGYLTVPELRTVPER
IITKLRRIPSRILDRLAARPGLLEELPMRVKQQVWEAHPALFRRGLGAIL
EEYVRHRASVMMPAYDVVALLSLSSTPSPSAAGAPGKEVSPSKRRQENPC
LAHLVACVNTEDDSKLDQVASHFIIDEYVSKGDPTLCTLFADFQVQLAHV
RSGRAAVISRLTHLARALEEWVKAGRVEAKALAQVQVHLRAMLSSSGTGA
GRGVTPMSLSSKKEKKRKEADITSSGLTLKLPRAALSTPVAEKSWAKIPT
LEQALEEGMGYLLKLDAPTRWFAKPVLELWPQIQEAYLAVVPHPMDLESM
RKRVKASVGGVGEKERGGTAGYSTFAAFDSDAERVFDNCMAFNPPGSAFH
SGAERMKKAWGKFKVKFEKTDVKRAMDRKKGAVGAGGLGDGSGLVTKATT
STFVGAGDEAELLSAAGRGTDKARDPTVPEALPGRPRVEAPTWGHALMLL
ADPCVLQVLGKTLKQELDEVFRSQGLPKDHPRVPSLLQLLYLGLDARRQL
ALVRLKTKAGVPPPPPPTEPLHKKGNKKGKTAPSPPELPPCFSIPDARVS
FWGFGDKEGEPAAENDVQEAVRTVLPSLLEVNAYVKVANKYATATDGWEG
QPHDKDEIEGKMLESVGRLYRACKARQPSPLLLCVLTHALCHSLATGDDD
RTTPLAKTLAALLDHLNRKRRSEMTLALPDMQDRALWIGLASAGLLRVPK
KKNKAALAGEKANRAGATRAGPVGAGMPAVGGAGVGADRKAHATASTSAS
ARPPLEPELRDLILGIFVNQLPFACSPRSISFCHEQVLRLLLGWMARGAL
EPPKGKEGREEGKDGIGKRTVRNWVEGIVQGVGGHKAMWEVWEKEEFKCL
RRQYERLFEATPWARGVVLGEGGAGVVSESAGPDGVRADESEQQKKMEPL
GGKAADDK back to topmRNA from alignment at CM002456.1:485295..489325- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna815 ID=rna815|Name=rna815|organism=Nannochloropsis gaditana|type=mRNA|length=4031bp|location=Sequence derived from alignment at CM002456.1:485295..489325- (Nannochloropsis gaditana)
CACAGGCGGGTCATGGATACAGGAAGGGGGGCCGACGGTAATCCCACGGG
AGGTGACACGAAGCCAGTGCTTCTTCCTCCCGTAGCATCAAAAAAGAGCC
CAGCGGGTCAGCAACCCTTTCCCAAATTGAAAGTAACGACACCGGCGACG
TCGACCCCGCAAGACACCCCGTTGCGACTATCAATGTCTAGCGATGCAGT
ACAGGACTCTAAAAGAGATGTGCCCATTGCAGCCGGAAAGAAATCGTTGT
CAAGCCTGTCGGAGAAAGTCTCATTACCAGAGGCGGCGTCAGGAACAGGA
ATAGCGTTGGTAGACAAATACAAGGCCAATGTAGACGATGCCAGCAAGAA
GCGAGGACTACCGGCACTAAGAATTGGCAGTATCGAAGCAGGGAGAGCAG
CTACGGAGGACAAGAAGAAAAAGATCAAGTTGGTGGCCCAGGCGGGTAAA
TCCGGGAGTCAACCAATAGTTCCGGCCTTACATCTCAAGAACATTGCACC
TGGAAATTCGTCGGGAACCGCCAGTGTACCAACAATATTGAGTGGTAGAG
AATCAGTGAAATCACGCCCTGTAGTCATTAGCACGGACTCCGAGGCTGCA
CCCGTTCCGGCTCTGCATGTGACAGCCTCTGCGCACATTCCAACTCCCTG
CCCATTTCCACCCGTGTCAGCGCCGTCGCAGGCGGCCGTGGTCGCGTCTT
CCCCTGTAAACGACCGAAGCAGCCCCGCAATGGCCCCGCTGCCGCCTCCG
TCACCCTCCTCGGCGCCGATGGCGGGATCGTCCGACCCGGCGCTCCACGA
GGAAGCGACTCCAGTACCCGCCATCCCCGACGTGGCCAGCCATGTCAAAG
TGCAGCCGGTAGGCTCCCCAAAAAGCAAGGAGCTGGTGCCTGCGCGAGGG
CCTCCCGTTGGCAACGCGGCTGGCCGCATGCTTATCAAGCGCGGCCTGCG
TGCAGGGGACCCACGGGCGTTCATCCAACGCTTTCAGGAGGAAAACGGTC
TCCGGGGGATCCCGGAGGCACGCCCCGCCCTGCAGTTGCTCGATGTCCTG
GGAGTTTCCCGCCTGCAGGTCTACCGACACCTGCTGGCGGACCTCCGGGC
CCGGCTGGTGGACCGGCTCGACCGGTGTCAAGACCAGGCCCAGCTCGAGC
GCCTCCTCGCCCACTCCTTCGGCTATTTGACCGTCCCTGAACTCCGCACC
GTCCCCGAGCGGATCATTACCAAGTTGCGCCGGATTCCGTCCCGGATTTT
GGATCGTCTGGCCGCGCGCCCCGGGCTTCTGGAGGAATTGCCGATGCGAG
TCAAGCAGCAGGTCTGGGAAGCCCATCCGGCCTTATTCCGGCGGGGGCTG
GGCGCGATCCTGGAAGAATACGTCCGGCATCGGGCCTCGGTGATGATGCC
TGCCTACGACGTGGTTGCCCTGCTCTCTTTGTCCTCCACTCCCTCCCCTT
CCGCCGCGGGCGCTCCGGGCAAGGAGGTGTCACCCAGCAAACGCCGCCAA
GAGAACCCTTGTCTCGCCCACCTCGTGGCCTGCGTGAACACCGAGGATGA
CTCCAAGCTGGATCAAGTCGCCTCACACTTTATAATCGACGAATATGTTT
CCAAGGGGGACCCTACGCTTTGTACGCTCTTCGCCGACTTTCAAGTCCAG
CTCGCGCACGTTCGGTCGGGGCGGGCCGCCGTCATCAGCCGGCTCACCCA
CTTGGCCCGGGCCCTGGAGGAGTGGGTAAAAGCGGGACGCGTGGAGGCCA
AGGCACTGGCCCAGGTGCAGGTACACTTGCGGGCGATGTTGTCAAGCTCC
GGCACAGGGGCTGGGCGGGGCGTTACCCCTATGTCGCTCTCTTCGAAGAA
GGAGAAAAAGAGGAAAGAGGCCGACATTACGAGCAGCGGCTTGACACTGA
AGTTGCCTCGTGCTGCGCTCTCTACTCCAGTCGCCGAAAAGTCATGGGCG
AAAATTCCAACGTTGGAGCAGGCATTAGAGGAAGGGATGGGGTATCTACT
GAAGCTGGACGCACCGACCCGCTGGTTCGCCAAGCCGGTATTGGAACTGT
GGCCTCAGATTCAGGAGGCGTATTTGGCCGTCGTGCCTCACCCAATGGAT
CTGGAAAGCATGCGCAAACGGGTCAAGGCGTCTGTCGGAGGGGTTGGGGA
AAAAGAAAGGGGAGGGACGGCGGGGTATTCGACATTTGCCGCTTTCGACA
GTGACGCGGAGCGTGTCTTTGATAACTGTATGGCGTTCAATCCTCCGGGG
AGTGCCTTCCACTCAGGAGCGGAGCGAATGAAGAAAGCCTGGGGGAAATT
CAAGGTTAAATTTGAGAAAACAGACGTGAAAAGGGCCATGGATCGAAAGA
AAGGCGCGGTGGGTGCGGGGGGGCTGGGCGACGGGAGCGGGCTCGTCACC
AAGGCCACCACATCCACCTTTGTGGGTGCGGGGGACGAGGCAGAGCTCCT
TTCGGCGGCTGGAAGAGGCACGGACAAGGCGCGGGATCCCACGGTTCCGG
AAGCGTTGCCTGGTAGGCCCCGGGTGGAGGCCCCAACGTGGGGGCATGCC
TTGATGCTCCTGGCCGACCCCTGCGTGTTGCAGGTGCTGGGCAAGACCCT
CAAACAGGAGTTAGACGAGGTCTTCCGGTCGCAGGGTCTCCCCAAGGATC
ATCCGCGGGTTCCCTCCCTCCTTCAACTTCTTTACCTTGGGCTAGACGCT
CGGCGGCAATTGGCTCTGGTGCGGCTGAAAACCAAGGCAGGCGTTCCCCC
GCCTCCCCCCCCGACAGAACCCCTGCACAAAAAGGGAAACAAGAAGGGTA
AGACCGCTCCTTCCCCTCCCGAACTTCCTCCCTGCTTCTCAATTCCGGAC
GCAAGAGTCTCTTTTTGGGGTTTTGGAGACAAAGAGGGGGAGCCGGCAGC
GGAGAATGATGTGCAAGAAGCAGTCCGGACTGTGTTGCCCAGCCTCTTGG
AGGTCAACGCGTACGTAAAAGTGGCGAACAAATACGCCACAGCGACGGAT
GGATGGGAAGGGCAGCCGCACGATAAAGATGAGATTGAAGGGAAGATGTT
GGAGAGCGTGGGGCGTTTGTACCGGGCGTGCAAGGCAAGGCAGCCTTCTC
CCTTGCTCTTGTGCGTGCTCACACATGCTCTCTGTCACAGCCTGGCTACT
GGGGACGATGATCGGACGACGCCCTTGGCCAAGACGCTGGCCGCCTTGCT
GGATCACTTGAACCGGAAGAGAAGGAGCGAGATGACGTTGGCGCTCCCAG
ACATGCAGGACCGCGCCCTGTGGATCGGCTTGGCGAGTGCCGGGCTCTTG
CGGGTCCCGAAAAAGAAAAACAAGGCGGCATTGGCAGGAGAGAAGGCGAA
TCGGGCCGGCGCCACGCGGGCTGGACCTGTGGGCGCGGGGATGCCTGCTG
TAGGCGGTGCTGGCGTGGGTGCCGACAGGAAGGCGCACGCGACGGCCTCC
ACGTCGGCCTCGGCTCGTCCACCCTTGGAGCCAGAGCTTAGGGACCTGAT
TTTGGGTATTTTTGTAAACCAGCTGCCCTTTGCTTGTTCACCTCGATCTA
TTTCCTTTTGCCACGAGCAGGTGCTGCGCTTACTTTTAGGGTGGATGGCG
CGGGGGGCTTTGGAACCGCCGAAGGGAAAAGAAGGCAGGGAGGAGGGGAA
GGATGGAATAGGGAAGCGGACGGTCAGGAATTGGGTGGAGGGGATCGTGC
AGGGTGTAGGGGGCCACAAGGCGATGTGGGAGGTGTGGGAGAAGGAGGAG
TTCAAGTGCCTGCGCAGGCAGTACGAGAGGCTGTTCGAGGCGACGCCCTG
GGCCCGCGGCGTAGTCTTGGGCGAAGGAGGGGCCGGAGTGGTGTCCGAGA
GCGCAGGCCCGGATGGAGTCCGGGCAGATGAAAGCGAACAGCAAAAGAAG
ATGGAGCCTCTGGGAGGAAAAGCAGCAGATGACAAGTGACTAGAAGAGCT
GGCAGCGTAGGCCTCGTCCCTTCCCTTCGGAAGGAAAATCATTCAAATAA
TCCATAAAGCAGCTAGCACAGACCTTTCTCG back to topCoding sequence (CDS) from alignment at CM002456.1:485295..489325- >rna815 ID=rna815|Name=rna815|organism=Nannochloropsis gaditana|type=CDS|length=3927bp|location=Sequence derived from alignment at CM002456.1:485295..489325- (Nannochloropsis gaditana)
ATGGATACAGGAAGGGGGGCCGACGGTAATCCCACGGGAGGTGACACGAA
GCCAGTGCTTCTTCCTCCCGTAGCATCAAAAAAGAGCCCAGCGGGTCAGC
AACCCTTTCCCAAATTGAAAGTAACGACACCGGCGACGTCGACCCCGCAA
GACACCCCGTTGCGACTATCAATGTCTAGCGATGCAGTACAGGACTCTAA
AAGAGATGTGCCCATTGCAGCCGGAAAGAAATCGTTGTCAAGCCTGTCGG
AGAAAGTCTCATTACCAGAGGCGGCGTCAGGAACAGGAATAGCGTTGGTA
GACAAATACAAGGCCAATGTAGACGATGCCAGCAAGAAGCGAGGACTACC
GGCACTAAGAATTGGCAGTATCGAAGCAGGGAGAGCAGCTACGGAGGACA
AGAAGAAAAAGATCAAGTTGGTGGCCCAGGCGGGTAAATCCGGGAGTCAA
CCAATAGTTCCGGCCTTACATCTCAAGAACATTGCACCTGGAAATTCGTC
GGGAACCGCCAGTGTACCAACAATATTGAGTGGTAGAGAATCAGTGAAAT
CACGCCCTGTAGTCATTAGCACGGACTCCGAGGCTGCACCCGTTCCGGCT
CTGCATGTGACAGCCTCTGCGCACATTCCAACTCCCTGCCCATTTCCACC
CGTGTCAGCGCCGTCGCAGGCGGCCGTGGTCGCGTCTTCCCCTGTAAACG
ACCGAAGCAGCCCCGCAATGGCCCCGCTGCCGCCTCCGTCACCCTCCTCG
GCGCCGATGGCGGGATCGTCCGACCCGGCGCTCCACGAGGAAGCGACTCC
AGTACCCGCCATCCCCGACGTGGCCAGCCATGTCAAAGTGCAGCCGGTAG
GCTCCCCAAAAAGCAAGGAGCTGGTGCCTGCGCGAGGGCCTCCCGTTGGC
AACGCGGCTGGCCGCATGCTTATCAAGCGCGGCCTGCGTGCAGGGGACCC
ACGGGCGTTCATCCAACGCTTTCAGGAGGAAAACGGTCTCCGGGGGATCC
CGGAGGCACGCCCCGCCCTGCAGTTGCTCGATGTCCTGGGAGTTTCCCGC
CTGCAGGTCTACCGACACCTGCTGGCGGACCTCCGGGCCCGGCTGGTGGA
CCGGCTCGACCGGTGTCAAGACCAGGCCCAGCTCGAGCGCCTCCTCGCCC
ACTCCTTCGGCTATTTGACCGTCCCTGAACTCCGCACCGTCCCCGAGCGG
ATCATTACCAAGTTGCGCCGGATTCCGTCCCGGATTTTGGATCGTCTGGC
CGCGCGCCCCGGGCTTCTGGAGGAATTGCCGATGCGAGTCAAGCAGCAGG
TCTGGGAAGCCCATCCGGCCTTATTCCGGCGGGGGCTGGGCGCGATCCTG
GAAGAATACGTCCGGCATCGGGCCTCGGTGATGATGCCTGCCTACGACGT
GGTTGCCCTGCTCTCTTTGTCCTCCACTCCCTCCCCTTCCGCCGCGGGCG
CTCCGGGCAAGGAGGTGTCACCCAGCAAACGCCGCCAAGAGAACCCTTGT
CTCGCCCACCTCGTGGCCTGCGTGAACACCGAGGATGACTCCAAGCTGGA
TCAAGTCGCCTCACACTTTATAATCGACGAATATGTTTCCAAGGGGGACC
CTACGCTTTGTACGCTCTTCGCCGACTTTCAAGTCCAGCTCGCGCACGTT
CGGTCGGGGCGGGCCGCCGTCATCAGCCGGCTCACCCACTTGGCCCGGGC
CCTGGAGGAGTGGGTAAAAGCGGGACGCGTGGAGGCCAAGGCACTGGCCC
AGGTGCAGGTACACTTGCGGGCGATGTTGTCAAGCTCCGGCACAGGGGCT
GGGCGGGGCGTTACCCCTATGTCGCTCTCTTCGAAGAAGGAGAAAAAGAG
GAAAGAGGCCGACATTACGAGCAGCGGCTTGACACTGAAGTTGCCTCGTG
CTGCGCTCTCTACTCCAGTCGCCGAAAAGTCATGGGCGAAAATTCCAACG
TTGGAGCAGGCATTAGAGGAAGGGATGGGGTATCTACTGAAGCTGGACGC
ACCGACCCGCTGGTTCGCCAAGCCGGTATTGGAACTGTGGCCTCAGATTC
AGGAGGCGTATTTGGCCGTCGTGCCTCACCCAATGGATCTGGAAAGCATG
CGCAAACGGGTCAAGGCGTCTGTCGGAGGGGTTGGGGAAAAAGAAAGGGG
AGGGACGGCGGGGTATTCGACATTTGCCGCTTTCGACAGTGACGCGGAGC
GTGTCTTTGATAACTGTATGGCGTTCAATCCTCCGGGGAGTGCCTTCCAC
TCAGGAGCGGAGCGAATGAAGAAAGCCTGGGGGAAATTCAAGGTTAAATT
TGAGAAAACAGACGTGAAAAGGGCCATGGATCGAAAGAAAGGCGCGGTGG
GTGCGGGGGGGCTGGGCGACGGGAGCGGGCTCGTCACCAAGGCCACCACA
TCCACCTTTGTGGGTGCGGGGGACGAGGCAGAGCTCCTTTCGGCGGCTGG
AAGAGGCACGGACAAGGCGCGGGATCCCACGGTTCCGGAAGCGTTGCCTG
GTAGGCCCCGGGTGGAGGCCCCAACGTGGGGGCATGCCTTGATGCTCCTG
GCCGACCCCTGCGTGTTGCAGGTGCTGGGCAAGACCCTCAAACAGGAGTT
AGACGAGGTCTTCCGGTCGCAGGGTCTCCCCAAGGATCATCCGCGGGTTC
CCTCCCTCCTTCAACTTCTTTACCTTGGGCTAGACGCTCGGCGGCAATTG
GCTCTGGTGCGGCTGAAAACCAAGGCAGGCGTTCCCCCGCCTCCCCCCCC
GACAGAACCCCTGCACAAAAAGGGAAACAAGAAGGGTAAGACCGCTCCTT
CCCCTCCCGAACTTCCTCCCTGCTTCTCAATTCCGGACGCAAGAGTCTCT
TTTTGGGGTTTTGGAGACAAAGAGGGGGAGCCGGCAGCGGAGAATGATGT
GCAAGAAGCAGTCCGGACTGTGTTGCCCAGCCTCTTGGAGGTCAACGCGT
ACGTAAAAGTGGCGAACAAATACGCCACAGCGACGGATGGATGGGAAGGG
CAGCCGCACGATAAAGATGAGATTGAAGGGAAGATGTTGGAGAGCGTGGG
GCGTTTGTACCGGGCGTGCAAGGCAAGGCAGCCTTCTCCCTTGCTCTTGT
GCGTGCTCACACATGCTCTCTGTCACAGCCTGGCTACTGGGGACGATGAT
CGGACGACGCCCTTGGCCAAGACGCTGGCCGCCTTGCTGGATCACTTGAA
CCGGAAGAGAAGGAGCGAGATGACGTTGGCGCTCCCAGACATGCAGGACC
GCGCCCTGTGGATCGGCTTGGCGAGTGCCGGGCTCTTGCGGGTCCCGAAA
AAGAAAAACAAGGCGGCATTGGCAGGAGAGAAGGCGAATCGGGCCGGCGC
CACGCGGGCTGGACCTGTGGGCGCGGGGATGCCTGCTGTAGGCGGTGCTG
GCGTGGGTGCCGACAGGAAGGCGCACGCGACGGCCTCCACGTCGGCCTCG
GCTCGTCCACCCTTGGAGCCAGAGCTTAGGGACCTGATTTTGGGTATTTT
TGTAAACCAGCTGCCCTTTGCTTGTTCACCTCGATCTATTTCCTTTTGCC
ACGAGCAGGTGCTGCGCTTACTTTTAGGGTGGATGGCGCGGGGGGCTTTG
GAACCGCCGAAGGGAAAAGAAGGCAGGGAGGAGGGGAAGGATGGAATAGG
GAAGCGGACGGTCAGGAATTGGGTGGAGGGGATCGTGCAGGGTGTAGGGG
GCCACAAGGCGATGTGGGAGGTGTGGGAGAAGGAGGAGTTCAAGTGCCTG
CGCAGGCAGTACGAGAGGCTGTTCGAGGCGACGCCCTGGGCCCGCGGCGT
AGTCTTGGGCGAAGGAGGGGCCGGAGTGGTGTCCGAGAGCGCAGGCCCGG
ATGGAGTCCGGGCAGATGAAAGCGAACAGCAAAAGAAGATGGAGCCTCTG
GGAGGAAAAGCAGCAGATGACAAGTGA back to top
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