NO03G03690, NO03G03690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03690 vs. NCBI_GenBank
Match: EWM29860.1 (light-harvesting protein [Nannochloropsis gaditana]) HSP 1 Score: 326.2 bits (835), Expect = 7.200e-86 Identity = 158/175 (90.29%), Postives = 168/175 (96.00%), Query Frame = 0 Query: 34 MSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 MSASDMIGIDVETGGLFDPLGFSKDEQSLY+YR VELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPL AL Q+ ++RPLA+LQIV+A+ IEVTSGKQDPELAPGQ+GRFGEAFKPEGE EMAAVQLKELKNGRLAM+AIIGQWVQELLTGQGPIEQIT+GHISPFGDGQGLF Sbjct: 1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
BLAST of NO03G03690 vs. NCBI_GenBank
Match: EWM30498.1 (light-harvesting protein [Nannochloropsis gaditana]) HSP 1 Score: 257.7 bits (657), Expect = 3.100e-65 Identity = 135/209 (64.59%), Postives = 164/209 (78.47%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLPSGRRSSALRMSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQD-PELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 MK A +L ++AF+P+AP + R ++RM+ ++MIG DVET G+FDPLG +KDE SLYR R +ELKHGRVAMLACLGTLVQS+ HLPD+VFSNPRPLAALAQ+ ++RP+A QI LA+ IE+T GKQD APG +G FG AF P+ E+ AA+QLKELKNGRLAM+AIIGQ+VQE LTGQGPIEQ+ GH SPFGDGQG F Sbjct: 1 MKTAFAFLALLGVSTAFMPTAPRMT--RGRSVRMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVG-FGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206
BLAST of NO03G03690 vs. NCBI_GenBank
Match: EWM28183.1 (light harvesting complex protein [Nannochloropsis gaditana]) HSP 1 Score: 224.2 bits (570), Expect = 3.800e-55 Identity = 118/212 (55.66%), Postives = 150/212 (70.75%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLPSGRRSSALR----MSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 M L G+L++A+AF+P A +G+ S A + S SD+IG D ETGG++DPLG S++E SL +YR ELKHGRVAM A LG VQ HLPD VFSNPRPLAAL Q+ QRP A+ QI++ L IE T G+Q + APG + FG +F P+ E+E +QLKELKNGRLAM+A +G +QE LTGQGP+EQ+ AGH++PFGDGQG F Sbjct: 1 MMRAVVLLGLLSSAAAFIP-ATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210
BLAST of NO03G03690 vs. NCBI_GenBank
Match: CEM27246.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 211.1 bits (536), Expect = 3.400e-51 Identity = 117/194 (60.31%), Postives = 140/194 (72.16%), Query Frame = 0 Query: 15 SAFVPSAPLPS-----GRRSSALRMSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSY-THLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPE-LAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPF 202 +AFVPSAPL S RS+ +MS +MIG DVETGG+FDPL FS+DE SL+R RAVELKHGR+AMLACLG VQS HLPD VFS PRPL+AL ++ T+RP A QIV A+ IE+ G+QD E APG +G FG++FK EE QL+ELKNGRLAMI I+G VQE LTGQ EQI +G+I+PF Sbjct: 20 AAFVPSAPLRSLPTRRALRSTTPKMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPVFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPF 213
BLAST of NO03G03690 vs. NCBI_GenBank
Match: CEM11606.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 209.9 bits (533), Expect = 7.500e-51 Identity = 113/212 (53.30%), Postives = 141/212 (66.51%), Query Frame = 0 Query: 3 LLAALTGILATASAFVPSAPLPSGRRS-----SALRMSASDMI-GIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 ++ A+ ++ A AFVP RS A M A D + G DVETGG++DPLG S++E +L YRA ELKHGRV M+A LG +VQ+Y LPD VF+NPRPL A+ Q+ QRP A++QI+LA+ E+ +Q PE PG + FG AF+P E + +Q KELKNGRLAMI I G VQE LTGQGP+EQI GHISPFGDGQG F Sbjct: 4 VICAIALLVVGAHAFVPPTGFQGALRSRGAARPATTMGAVDQLAGADVETGGVWDPLGLSQNEDALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDPVFNNPRPLEAIVQVWQQRPEAIIQILLAIGATELYFLRQSPEDPPGSLQNFGAAFRPRDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPFGDGQGYF 215
BLAST of NO03G03690 vs. NCBI_GenBank
Match: XP_005853581.1 (light harvesting complex protein [Nannochloropsis gaditana CCMP526] >EKU22777.1 light harvesting complex protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 196.8 bits (499), Expect = 6.600e-47 Identity = 107/197 (54.31%), Postives = 137/197 (69.54%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLPSGRRSSALR----MSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQI 194 M L G+L++A+AF+P A +G+ S A + S SD+IG D ETGG++DPLG S++E SL +YR ELKHGRVAM A LG VQ HLPD VFSNPRPLAAL Q+ QRP A+ QI++ L IE T G+Q + APG + FG +F P+ E+E +QLKELKNGRLAM+A +G +QE LTGQGP+EQ+ Sbjct: 1 MMRAVVLLGLLSSAAAFIP-ATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQV 195
BLAST of NO03G03690 vs. NCBI_GenBank
Match: XP_005852776.1 (light-harvesting protein [Nannochloropsis gaditana CCMP526] >EKU23058.1 light-harvesting protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 193.7 bits (491), Expect = 5.600e-46 Identity = 110/214 (51.40%), Postives = 138/214 (64.49%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLPSG----RRSSALRMSASDMIGIDVETGGLFDPLGF--SKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 M++ AAL LATASAF+ A LPS R + M S ++G DVE FDPLG +KDE++L YRA ELKHGRV MLA +G LVQ HLPD F +P+ AL ++S++RPLA +QI +A+ +EV APG + KPE EE+A +QLKELKNGRLAM+A G QE +TGQGP+EQ+ +GHISPFGDGQG F Sbjct: 1 MRVAAALIATLATASAFLAPASLPSSSSFRRTQGRVSMDISGIVGSDVEVPE-FDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYTAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 213
BLAST of NO03G03690 vs. NCBI_GenBank
Match: EWM21948.1 (fucoxanthin chlorophyll a c binding protein [Nannochloropsis gaditana]) HSP 1 Score: 193.7 bits (491), Expect = 5.600e-46 Identity = 110/214 (51.40%), Postives = 138/214 (64.49%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLPSG----RRSSALRMSASDMIGIDVETGGLFDPLGF--SKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPELAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 M++ AAL LATASAF+ A LPS R + M S ++G DVE FDPLG +KDE++L YRA ELKHGRV MLA +G LVQ HLPD F +P+ AL ++S++RPLA +QI +A+ +EV APG + KPE EE+A +QLKELKNGRLAM+A G QE +TGQGP+EQ+ +GHISPFGDGQG F Sbjct: 14 MRVAAALIATLATASAFLAPASLPSSSSFRRTQGRVSMDISGIVGSDVEVPE-FDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYTAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 226
BLAST of NO03G03690 vs. NCBI_GenBank
Match: CEM02552.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 186.8 bits (473), Expect = 6.800e-44 Identity = 117/214 (54.67%), Postives = 138/214 (64.49%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLP-----SGRRSSALRMSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPE-LAPGQIGRFGEAFKPEGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 M L ++A ASAFVPSAPL R +A RM+ DMIG DVET G++DPLGFSKDE SLYRYRAVELKHGRVAMLA LG V H D P L A++Q+ + LQI+ + IE++ GKQD E APG +G FG E A +QLKE+KNGRLAMIAI G VQEL+TGQ ++Q+ GHISPFGDGQGLF Sbjct: 1 MMKLMVFAALIAAASAFVPSAPLRGLDKLQSRDRTAPRMAVEDMIGADVETRGVWDPLGFSKDESSLYRYRAVELKHGRVAMLAVLGYFVAELWHPLYDGKVEP-GLKAISQVPS---AGWLQILATIAAIELSIGKQDFENRAPGDLG-FGINPFENDPVEFAKLQLKEIKNGRLAMIAIAGMLVQELVTGQTTLQQLREGHISPFGDGQGLF 209
BLAST of NO03G03690 vs. NCBI_GenBank
Match: EWM25765.1 (light harvesting complex protein [Nannochloropsis gaditana]) HSP 1 Score: 181.8 bits (460), Expect = 2.200e-42 Identity = 113/211 (53.55%), Postives = 134/211 (63.51%), Query Frame = 0 Query: 1 MKLLAALTGILATASAFVPSAPLPSGRRSSALRMSASDMIGIDVETGGLFDPLGFSKDEQSLYRYRAVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLAALAQISTQRPLAVLQIVLALVFIEVTSGKQDPE-LAPGQIGRFGEAFKP--EGEEEMAAVQLKELKNGRLAMIAIIGQWVQELLTGQGPIEQITAGHISPFGDGQGLF 209 MK L G LA ASAFVP+AP S R RM+ +D++G DVETGG++DPL FSKDE SLYRYRAVELKHGR+AMLA LG V + H D +P + I A LQI+ + IE+T GKQD E APG +G FG F P E+ A +QLKELKNGRLAM+ G +QE +TGQ EQI A H+SPFGDGQG F Sbjct: 1 MKSAMVLVGSLAVASAFVPAAPKMS-RTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISP----GIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLG-FGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205 The following BLAST results are available for this feature:
BLAST of NO03G03690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03690 ID=NO03G03690|Name=NO03G03690|organism=Nannochloropsis oceanica|type=gene|length=1859bpback to top protein sequence of NO03G03690.1 >NO03G03690.1-protein ID=NO03G03690.1-protein|Name=NO03G03690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=209bpback to top Synonyms
Publications
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