NO03G02350, NO03G02350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02350 vs. NCBI_GenBank
Match: EWM29659.1 (hypothetical protein Naga_100112g10 [Nannochloropsis gaditana]) HSP 1 Score: 322.8 bits (826), Expect = 1.300e-84 Identity = 176/268 (65.67%), Postives = 201/268 (75.00%), Query Frame = 0 Query: 69 PMSLLGLLLMLAGAGCCIQAFILPLPRRPKVGLLQLHRQHPCRQRGALFASTTQEPGSDAPADSISPTPSTLASNAVTPSGKGFGTAPPPVARAKTGTVNKRLMNVIDAELKVVRDNQPEEATPLSEDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANTLNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELDMNKKKYVPPVNTSSVPLDSNGLPKITGAWYDIKAPVKAPAEETKE 337 P L+ L + CC+ F+LP+ RP G ++ RQR STTQEPGS+AP DS+ +A N+ GKGFG P RAK GTVNKRLMNVIDAEL VRD QPEEATPLSE+DTDLNGINP+QPLGAA+FAAFISFLFWRITFGLA LNNVHLDTDFYPA+RVFGIASTAFVGITALGAGVIGVTAIGLLGL RV +G+++GELDMNKKK PP ++S VPLD+ GLPK+TGAWYD+ P A AEE K+ Sbjct: 24 PSFLVALYVTATLTLCCVHGFVLPM--RPSQGGDVRFQRPSWRQRDVSVLSTTQEPGSEAPGDSMPLGARPVAPNSA--GGKGFGPTSTP-TRAKIGTVNKRLMNVIDAELDGVRDRQPEEATPLSEEDTDLNGINPVQPLGAAMFAAFISFLFWRITFGLAGALNNVHLDTDFYPAQRVFGIASTAFVGITALGAGVIGVTAIGLLGLAARVTFGVVSGELDMNKKKIAPPADSSPVPLDAQGLPKVTGAWYDVSPPAPA-AEEPKD 285
BLAST of NO03G02350 vs. NCBI_GenBank
Match: XP_002286892.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96533.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.8 bits (190), Expect = 7.200e-11 Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = 0 Query: 160 ARAKTGTVNKRLMNVIDAEL---------------KVVRDNQPEEATPLS-EDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANTLNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELD 292 A+A T TVN+RLM+ I A + + R + EE S E+ DLNG+NP+ +G A FA + W T L + L+TD Y +R+ G+ A +G+++L +G GV IG+ L +RV YG++TGELD Sbjct: 100 AKAATSTVNERLMSEIQASVDDQKYGTNKKNREYFREFRSQKTEEERRRSIEEAKDLNGVNPLVCIGGAAFAWACAGGLWFFTTYLGVLFASHPLETDIYFIQRLTGVFRNAVMGLSSLASGFFGVVGIGIFLLGIRVAYGVMTGELD 247
BLAST of NO03G02350 vs. NCBI_GenBank
Match: OLP81921.1 (Solute carrier family 2, facilitated glucose transporter member 3 [Symbiodinium microadriaticum]) HSP 1 Score: 74.3 bits (181), Expect = 7.900e-10 Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 0 Query: 188 EEATPLSEDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANTLNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELD-MNKKKYVPPVNTSSVPLD 310 E+ + + + DLNGI+P A A +S+ FW T A N +++DFYP +R+ + A VG+++L +G+ G TA+G+ L VRV G+++GELD +K K V +T+ LD Sbjct: 1473 EDQKRIVQQEVDLNGIDPTACFVGAAPVAALSYGFWTFTSRSAEWFYNHPVESDFYPVQRLGFVFQAAVVGLSSLASGIFGFTALGIFLLGVRVSIGVLSGELDPADKSKGVGKRSTAETVLD 1595
BLAST of NO03G02350 vs. NCBI_GenBank
Match: EJK62087.1 (hypothetical protein THAOC_17315 [Thalassiosira oceanica]) HSP 1 Score: 73.9 bits (180), Expect = 1.000e-9 Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 0 Query: 151 GFGTAPPPVARAKTGTVNKRLMNVIDAELKVV--------------RDNQPEEATPLS-EDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANTLNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELD 292 G T PV +A T TVN+RLM+ I A + R + EE S E+ DLNG+NP+ +G A F+ + W T LA LDTD Y +R+ + A +G+++L +G GV +G+ L +RV YG+ GELD Sbjct: 111 GSTTTAEPV-KAATSTVNERLMSEIQASVDTTKYGDSKKREYFNEFRSQKTEEERQRSIEEAKDLNGVNPLVCMGGATFSWACAGALWIFTQFLAQLFATHPLDTDIYFVQRLAQVFRNAVLGLSSLASGFFGVIGVGIFLLGLRVAYGVARGELD 265
BLAST of NO03G02350 vs. NCBI_GenBank
Match: CBJ29167.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 66.2 bits (160), Expect = 2.200e-7 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 0 Query: 161 RAKTGTVNKRLMNVIDAELKVVRDNQPEEATPLSEDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANT-LNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELD 292 +AK TVN RL+ I+ + K + EE+ + + DLNG+NP + A AA +SF W+ T LA + ++D R+ A VG+ ALGAG+ GVTA+G+ + V G+ GELD Sbjct: 89 KAKLQTVNARLLAQIEEQGKGI-VIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELD 219
BLAST of NO03G02350 vs. NCBI_GenBank
Match: GAX22069.1 (hypothetical protein FisN_6Hh316 [Fistulifera solaris]) HSP 1 Score: 64.7 bits (156), Expect = 6.300e-7 Identity = 47/146 (32.19%), Postives = 68/146 (46.58%), Query Frame = 0 Query: 162 AKTGTVNKRLMNVID---------AELKVVRD-------NQPEEATPLSEDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANTLNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELD 292 A+TGTVN+RLM + A K ++ EE +LNG+NP+ V A +F W +T A + + +DFY +R+ + +GI +L G GVT +G+ L VRV YG+ TGELD Sbjct: 46 AQTGTVNERLMQELQEAKQKEKFGARSKFSKNFDGFRSQKTDEEREAAIAAARNLNGVNPVVTTIGGVLALAAAFGLWTLTTTAAEFFASHPVVSDFYVVERLAAVFRNVVMGIISLATGFFGVTGLGIFLLGVRVAYGVATGELD 191
BLAST of NO03G02350 vs. NCBI_GenBank
Match: GAX14538.1 (hypothetical protein FisN_6Lh316 [Fistulifera solaris]) HSP 1 Score: 64.7 bits (156), Expect = 6.300e-7 Identity = 46/145 (31.72%), Postives = 68/145 (46.90%), Query Frame = 0 Query: 163 KTGTVNKRLMNVID---------AELKVVRD-------NQPEEATPLSEDDTDLNGINPIQPLGAAVFAAFISFLFWRITFGLANTLNNVHLDTDFYPAKRVFGIASTAFVGITALGAGVIGVTAIGLLGLTVRVMYGIITGELD 292 +TGTVN+RLM + A K ++ EE +LNG+NP+ V A +F W +T A + +++DFY +R+ + +GI +L G GVT +G+ L VRV YG+ TGELD Sbjct: 68 QTGTVNERLMQELQEAKQKEKFGARSKFSKNFDGFRSQKTDEEREAAIAAARNLNGVNPVVTTIGGVLALAAAFGLWTLTTTAAEFFASHPVNSDFYVVERLAAVFRNVVMGIISLATGFFGVTGLGIFLLGVRVAYGVATGELD 212 The following BLAST results are available for this feature:
BLAST of NO03G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02350 ID=NO03G02350|Name=NO03G02350|organism=Nannochloropsis oceanica|type=gene|length=1114bpback to top protein sequence of NO03G02350.1 >NO03G02350.1-protein ID=NO03G02350.1-protein|Name=NO03G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=337bpback to top Synonyms
Publications
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