NO03G01990, NO03G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01990 vs. NCBI_GenBank
Match: EWM24685.1 (histone 3 [Nannochloropsis gaditana] >EWM29656.1 histone 3 [Nannochloropsis gaditana]) HSP 1 Score: 255.0 bits (650), Expect = 2.400e-64 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 Query: 112 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 136
BLAST of NO03G01990 vs. NCBI_GenBank
Match: XP_019280776.1 (PREDICTED: histone H3-like centromeric protein cpar-1 [Panthera pardus]) HSP 1 Score: 252.3 bits (643), Expect = 1.600e-63 Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 0 Query: 105 HSKPPFKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 HS+P + MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 135 HSRPAWGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 277
BLAST of NO03G01990 vs. NCBI_GenBank
Match: EGI60526.1 (Histone H3, partial [Acromyrmex echinatior]) HSP 1 Score: 251.5 bits (641), Expect = 2.700e-63 Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0 Query: 110 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 1 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
BLAST of NO03G01990 vs. NCBI_GenBank
Match: XP_008615723.1 (histone H3 [Saprolegnia diclina VS20] >XP_012202550.1 histone H3 [Saprolegnia parasitica CBS 223.65] >EQC30985.1 histone H3 [Saprolegnia diclina VS20] >KDO26684.1 histone H3 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 251.5 bits (641), Expect = 2.700e-63 Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 0 Query: 112 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGERS Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
BLAST of NO03G01990 vs. NCBI_GenBank
Match: XP_022605550.1 (histone H3-like [Seriola dumerili]) HSP 1 Score: 251.5 bits (641), Expect = 2.700e-63 Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0 Query: 110 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 108 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 245
BLAST of NO03G01990 vs. NCBI_GenBank
Match: ELK33066.1 (Histone H3.1 [Myotis davidii]) HSP 1 Score: 251.1 bits (640), Expect = 3.500e-63 Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0 Query: 104 NHSKPPFKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 N S P F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 95 NLSSPCFAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 238
BLAST of NO03G01990 vs. NCBI_GenBank
Match: XP_002999294.1 (histone, putative [Phytophthora infestans T30-4] >XP_002906612.1 histone H3 [Phytophthora infestans T30-4] >XP_008614757.1 histone H3 [Saprolegnia diclina VS20] >XP_008620149.1 histone H3 [Saprolegnia diclina VS20] >XP_008863622.1 histone H3 [Aphanomyces invadans] >XP_008864894.1 histone [Aphanomyces invadans] >XP_008868863.1 histone [Aphanomyces invadans] >XP_008892384.1 histone H3 [Phytophthora parasitica INRA-310] >XP_008903638.1 histone [Phytophthora parasitica INRA-310] >XP_009515673.1 hypothetical protein PHYSODRAFT_476994 [Phytophthora sojae] >XP_009515674.1 hypothetical protein PHYSODRAFT_322070 [Phytophthora sojae] >XP_009518876.1 hypothetical protein PHYSODRAFT_284752 [Phytophthora sojae] >XP_009825936.1 histone H3 [Aphanomyces astaci] >XP_009827126.1 histone [Aphanomyces astaci] >XP_009834846.1 histone [Aphanomyces astaci] >XP_012195024.1 histone H3 [Saprolegnia parasitica CBS 223.65] >XP_012200784.1 histone H3 [Saprolegnia parasitica CBS 223.65] >XP_012201826.1 histone H3 [Saprolegnia parasitica CBS 223.65] >XP_012202019.1 histone H3 [Saprolegnia parasitica CBS 223.65] >XP_024571662.1 histone h3 [Plasmopara halstedii] >XP_024575906.1 histone h3 [Plasmopara halstedii] >EEY66013.1 histone H3 [Phytophthora infestans T30-4] >EEY69440.1 histone, putative [Phytophthora infestans T30-4] >EGZ23588.1 hypothetical protein PHYSODRAFT_284752 [Phytophthora sojae] >EGZ28398.1 hypothetical protein PHYSODRAFT_476994 [Phytophthora sojae] >EGZ28399.1 hypothetical protein PHYSODRAFT_322070 [Phytophthora sojae] >EQC26400.1 histone H3 [Saprolegnia diclina VS20] >EQC31750.1 histone H3 [Saprolegnia diclina VS20] >ETI49040.1 histone [Phytophthora parasitica P1569] >ETI49433.1 histone H3 [Phytophthora parasitica P1569] >ETK88908.1 histone [Phytophthora parasitica] >ETK89311.1 histone [Phytophthora parasitica] >ETL42306.1 histone H3 [Phytophthora parasitica] >ETL42765.1 histone [Phytophthora parasitica] >ETL95480.1 histone H3 [Phytophthora parasitica] >ETL95914.1 histone [Phytophthora parasitica] >ETM48679.1 histone [Phytophthora parasitica] >ETM49078.1 histone H3 [Phytophthora parasitica] >ETN11156.1 histone [Phytophthora parasitica INRA-310] >ETN23188.1 histone H3 [Phytophthora parasitica INRA-310] >ETO77778.1 histone [Phytophthora parasitica P1976] >ETO78168.1 histone [Phytophthora parasitica P1976] >ETP18807.1 histone [Phytophthora parasitica CJ01A1] >ETP19206.1 histone H3 [Phytophthora parasitica CJ01A1] >ETP46728.1 histone [Phytophthora parasitica P10297] >ETP47135.1 histone [Phytophthora parasitica P10297] >ETV75715.1 histone [Aphanomyces astaci] >ETV83696.1 histone [Aphanomyces astaci] >ETV84244.1 histone H3 [Aphanomyces astaci] >ETW02258.1 histone [Aphanomyces invadans] >ETW06819.1 histone [Aphanomyces invadans] >ETW07529.1 histone H3 [Aphanomyces invadans] >KDO27242.1 histone H3 [Saprolegnia parasitica CBS 223.65] >KDO27386.1 histone H3 [Saprolegnia parasitica CBS 223.65] >KDO28336.1 histone H3 [Saprolegnia parasitica CBS 223.65] >KDO34168.1 histone H3 [Saprolegnia parasitica CBS 223.65] >CEG39537.1 histone h3 [Plasmopara halstedii] >CEG35293.1 histone h3 [Plasmopara halstedii] >OQR81956.1 histone [Thraustotheca clavata] >OQR83172.1 histone [Achlya hypogyna] >OQR84476.1 histone [Achlya hypogyna] >OQR84978.1 histone [Achlya hypogyna] >OQR86300.1 histone [Achlya hypogyna] >OQS07269.1 histone [Thraustotheca clavata] >OWZ18716.1 Histone 3 [Phytophthora megakarya] >OWZ21064.1 Histone 3 [Phytophthora megakarya] >GAX98686.1 histone 3 [Pythium insidiosum] >GAX97454.1 histone 3 [Pythium insidiosum] >POM66579.1 Histone [Phytophthora palmivora var. palmivora] >POM66595.1 Histone [Phytophthora palmivora var. palmivora] >POM80893.1 Histone [Phytophthora palmivora var. palmivora]) HSP 1 Score: 251.1 bits (640), Expect = 3.500e-63 Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0 Query: 112 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEA EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGERS Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
BLAST of NO03G01990 vs. NCBI_GenBank
Match: XP_009032312.1 (histone 3 [Aureococcus anophagefferens] >XP_009034477.1 histone 3 [Aureococcus anophagefferens] >XP_009034714.1 histone 3 [Aureococcus anophagefferens] >XP_009036298.1 histone 3 [Aureococcus anophagefferens] >XP_009041141.1 histone 3 [Aureococcus anophagefferens] >XP_009041621.1 histone 3 [Aureococcus anophagefferens] >EGB03692.1 histone 3 [Aureococcus anophagefferens] >EGB04155.1 histone 3 [Aureococcus anophagefferens] >EGB09188.1 histone 3 [Aureococcus anophagefferens] >EGB10903.1 histone 3 [Aureococcus anophagefferens] >EGB11171.1 histone 3 [Aureococcus anophagefferens] >EGB12654.1 histone 3 [Aureococcus anophagefferens]) HSP 1 Score: 250.8 bits (639), Expect = 4.600e-63 Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0 Query: 112 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL+RKLPFQRLVREIAQDFKTDLRFQGSAVLALQEA EAYLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGERS Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLVRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
BLAST of NO03G01990 vs. NCBI_GenBank
Match: GAX76969.1 (hypothetical protein CEUSTIGMA_g4416.t1 [Chlamydomonas eustigma]) HSP 1 Score: 250.8 bits (639), Expect = 4.600e-63 Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0 Query: 110 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 F+MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAVLALQEA EAYLVGLFEDTNLAAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 11 FEMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGERA 148
BLAST of NO03G01990 vs. NCBI_GenBank
Match: XP_007483414.1 (PREDICTED: uncharacterized protein LOC100011344 [Monodelphis domestica]) HSP 1 Score: 250.4 bits (638), Expect = 5.900e-63 Identity = 131/138 (94.93%), Postives = 136/138 (98.55%), Query Frame = 0 Query: 110 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLARRIRGERS 248 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+E+YLVGLFEDTNL AIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 368 FKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 505 The following BLAST results are available for this feature:
BLAST of NO03G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01990 ID=NO03G01990|Name=NO03G01990|organism=Nannochloropsis oceanica|type=gene|length=1563bpback to top protein sequence of NO03G01990.1 >NO03G01990.1-protein ID=NO03G01990.1-protein|Name=NO03G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=248bpback to top Synonyms
Publications
|