jgi.p|Nanoce1779_2|516897, gene_1385 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|516897
Unique Namegene_1385
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:438333..438656 -

Link to JBrowse

Properties
Property NameValue
TranscriptId516983
ProteinId516897
Product namehistone H3
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:438333..438656 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL001ncniL001Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01990NO03G01990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|516897mRNA_1385-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|516897mRNA_1385Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|516897

>mRNA_1385-protein ID=mRNA_1385-protein|Name=jgi.p|Nanoce1779_2|516897|organism=Nannochloropsis oceanica|type=polypeptide|length=108bp
SAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD
FKTDLRFQGSAVLALQEATEAYLVGLFEDTNLAAIHAKRVTIMPKDVQLA
RRIRGERS
back to top
Synonyms
Publications