NO03G00680, NO03G00680 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G00680
Unique Name	NO03G00680
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3748
Alignment location	chr3:216990..220737 -

Link to JBrowse

Properties


Property Name	Value
Description	Pp-loop domain protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:216990..220737 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011063	tRNA-lysidine/thiocyt_synth

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Homology

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: CBJ49206.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 365.9 bits (938), Expect = 2.700e-97
Identity = 173/275 (62.91%), Postives = 216/275 (78.55%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHYTGERG-VRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRKANKAVVATKGKKKEG 606
            LFP+  K+I++ VG+A++ W MI +GDRLCLGLSGGKDS+TLLHVLLHLQK+API F ++CATVDPQTPSFDPSPLIPY++ LGV  HY+S PII+QAK  +QGDSLC+FC+RMKRGLLY CC E  YNKL+LAQHLDD+ ES  MS +HNGQ RTMKA+Y  E G VRVIRPL Y RE  TK FA +NRLP++NENCPACFE+PKER R+KKML+KEESL P MY+NLR+ ++PL+D+++Y  +    + +  R   R++       KG +  G
Sbjct:  866 LFPTPGKKIMRAVGQAVQAWRMIEDGDRLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCARMKRGLLYACCREQGYNKLVLAQHLDDLAESFIMSALHNGQVRTMKANYKIEAGDVRVIRPLCYAREALTKDFARTNRLPLVNENCPACFEEPKERHRVKKMLAKEESLFPSMYANLRKALVPLMDDEVYASMDKTSSEVAARQLERRSRPPTRRKKGDQAGG 1140

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: XP_024575122.1 (hypothetical protein L914_16740 [Plasmopara halstedii] >CEG38753.1 hypothetical protein L914_16740 [Plasmopara halstedii])

HSP 1 Score: 349.7 bits (896), Expect = 2.000e-92
Identity = 169/274 (61.68%), Postives = 214/274 (78.10%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRKANKAVVATKGKKKE 605
            LFP+ PK++L+ VG+AI  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+APIRF ++CATVDPQTPSFDPSPL  Y+  LG+ YHYLS  II++AK ++ GDSLCSFC+RMKRGLLYTCC    +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V ++RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E   + RK   +   +KG+K++
Sbjct:  735 LFPTPPKKLLRLVGQAIMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLSFQKRAPIRFKLACATVDPQTPSFDPSPLKDYMHTLGLEYHYLSENIIERAKCEMNGDSLCSFCARMKRGLLYTCCRNFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEILRPLAYVREIELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDTSYTALKAVRARVEHAKQVRKRAPS-SKSKGQKRQ 1007

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: ETI36477.1 (hypothetical protein F443_17403 [Phytophthora parasitica P1569])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  737 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 996

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: ETK76739.1 (hypothetical protein L915_16922 [Phytophthora parasitica] >ETL30170.1 hypothetical protein L916_16825 [Phytophthora parasitica] >ETL83396.1 hypothetical protein L917_16658 [Phytophthora parasitica] >ETP06332.1 hypothetical protein F441_17268 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  737 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 996

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: ETM36616.1 (hypothetical protein L914_16740 [Phytophthora parasitica])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  737 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 996

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: XP_008895860.1 (hypothetical protein PPTG_03843 [Phytophthora parasitica INRA-310] >ETN18155.1 hypothetical protein PPTG_03843 [Phytophthora parasitica INRA-310])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  737 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 996

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: ETO65207.1 (hypothetical protein F444_17440 [Phytophthora parasitica P1976])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  737 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 996

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: ETP34438.1 (hypothetical protein F442_17253 [Phytophthora parasitica P10297])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  737 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 996

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: KUF79431.1 (tRNA 2-thiocytidine biosynthesis protein TtcA [Phytophthora nicotianae])

HSP 1 Score: 348.6 bits (893), Expect = 4.500e-92
Identity = 164/260 (63.08%), Postives = 209/260 (80.38%), Query Frame = 0

Query:  332 LFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHY-TGERGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRK 591
            LFP+ PK++L+ VG+A+  WDMI EGDRL LG+SGGKDSL+LLHVLL  QK+AP+RF ++CATVDPQTPSFDPSPL  Y++ALGV YHYLS  II++A  ++ GDSLCS+CSRMKRG+LY+CC +  +NKL+LAQHLDD+ ES FMS MHNGQ RTMKA Y   +R V V+RPL Y RE E K FA  +RLP+INENCPACFE+PKER R+KKML++EESL P MY++LRR ++PL+D+  Y  +++  A +E+  + RK
Sbjct:  644 LFPTPPKKLLRWVGQALMQWDMIQEGDRLLLGVSGGKDSLSLLHVLLRFQKRAPVRFELACATVDPQTPSFDPSPLKEYMRALGVEYHYLSENIIERATCEMNGDSLCSYCSRMKRGVLYSCCRKFGFNKLVLAQHLDDLAESFFMSAMHNGQLRTMKAKYWNDQRDVEVLRPLAYVREVELKKFAYDSRLPVINENCPACFEEPKERHRVKKMLAQEESLYPDMYNSLRRALLPLMDDASYAPLEAVRARVEQAKQERK 903

[Close]

BLAST of NO03G00680 vs. NCBI_GenBank
Match: OQR94019.1 (cysteine desulfurase [Thraustotheca clavata])

HSP 1 Score: 348.2 bits (892), Expect = 5.900e-92
Identity = 168/279 (60.22%), Postives = 218/279 (78.14%), Query Frame = 0

Query:  331 TLFPSIPKRILKTVGEAIRDWDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTPSFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLLYTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHYTGE-RGVRVIRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEESLMPRMYSNLRRGIIPLLDEDMYNVIQSKYAA--IEERIKH--RKANKAVVATKGKKKE 605
            +LFP  P+++++ VG+A+  W MI +GDRL LG+SGGKDSL+LLH+LL LQK+APIRF+++CATVDPQTPSFDPSPL  Y+KAL VPYHYLS  I+++A  ++ GDSLCS+CSRMKRGLLYTCC  +NYNKL+LAQHLDD+ ES  MS M+NGQ RTMKA Y  + + V +IRPL+Y RE   K FA S RLP+INENCPACFE+PKER R+KKML KEESL P MY++ RR ++PL+D ++Y  + +  A   I++++K   +K+ KA+   K KK E
Sbjct:  700 SLFPKPPQKLMRLVGQALLQWGMIQDGDRLVLGVSGGKDSLSLLHILLTLQKRAPIRFTLACATVDPQTPSFDPSPLKEYMKALNVPYHYLSENIVERAVCEMNGDSLCSYCSRMKRGLLYTCCRTNNYNKLVLAQHLDDLAESFIMSAMYNGQVRTMKAKYWNDTKDVEIIRPLVYAREEALKDFAYSARLPVINENCPACFEEPKERQRVKKMLFKEESLNPEMYNSFRRALLPLMDNEIYGPLNAIRARIDIQKKVKSNAQKSTKAIEKAKEKKNE 978

The following BLAST results are available for this feature:

BLAST of NO03G00680 vs. NCBI_GenBank

BLAST of NO03G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CBJ49206.1	2.700e-97	62.91	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_024575122.1	2.000e-92	61.68	hypothetical protein L914_16740 [Plasmopara halste...	[more]
ETI36477.1	4.500e-92	63.08	hypothetical protein F443_17403 [Phytophthora para...	[more]
ETK76739.1	4.500e-92	63.08	hypothetical protein L915_16922 [Phytophthora para...	[more]
ETM36616.1	4.500e-92	63.08	hypothetical protein L914_16740 [Phytophthora para...	[more]
XP_008895860.1	4.500e-92	63.08	hypothetical protein PPTG_03843 [Phytophthora para...	[more]
ETO65207.1	4.500e-92	63.08	hypothetical protein F444_17440 [Phytophthora para...	[more]
ETP34438.1	4.500e-92	63.08	hypothetical protein F442_17253 [Phytophthora para...	[more]
KUF79431.1	4.500e-92	63.08	tRNA 2-thiocytidine biosynthesis protein TtcA [Phy...	[more]
OQR94019.1	5.900e-92	60.22	cysteine desulfurase [Thraustotheca clavata]	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL065	nonsL065	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR053	ngnoR053	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR051	ngnoR051	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G00680.1	NO03G00680.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|925	gene_1246	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_104720g1	gene637	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G00680.1	NO03G00680.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G00680 ID=NO03G00680|Name=NO03G00680|organism=Nannochloropsis oceanica|type=gene|length=3748bp
ATGATAGTGCGGGGACAGCATTCTTCCTCCTCCACCTCCTCCTCCTCGTC
GTCGTCCTCCTCCTCCTTTTCCGGCGGGTGCTCTTATGGATCGGGGAAGC
TCCGTCCGCGGCCGTGTTTCTTGGATCGgtacgtctccctccctccctcc
ctccctccctccctcccttcctccctctcagtgttactcaacttcatttt
tcatccttcctccttccctttccaccgcccctccctccgtcccttcctcc
tcccccttccccccccccagCGAATCGCCTCGCTACCAGTACCGAGAGCT
GATCCATGAGCCACTCCACCCTCCCTCCCGCCGTCCCTCTATCCCTTCCT
CCGTCTTCCTCCCCTCGCGCGCCCTCCCTTCCTCTCTCCCTCCTTCCCAC
TCTTCCTCCTTCCCGTCCTCCGCACCAACCGACTATCGAGAACTCACATC
CCTCCGAGGGCAGCAGCAGATTCAACAGCAGCAGCAACAGCAGCAGCTTC
AACAGAAGAAACGGCCGTCGGATGAACAGATGTCTCATTTAACGGCTAAC
TTGAAACGGATTGCGACCTTTCGCCGgtaggtggagagaaggagggaggg
agggaaggagggaaggagggagcgaaggaaggaaggaggaagggagggag
gacatcattcgcgcaatttcgtcatttcccccctcatgtctcttctgtct
ctctctccctccctccctccctccctcccttctcagTGGTGGCGTTGGCC
TGGGCGCTCTGCGGCCTGCATCATCTGCCCTCCCCCTCTCCCGCCATCCT
CCTCCTCCCTCCTCCTCGTCTTCCTCCTCCCCCTCTTCCTCCTCCTCGTC
CCTTGTTTCCACATCCAACGGCGTCGGCCCATTTGCCATTCCTCCATTCC
GAGGAGGAGGGAAGGAGAGCGGGAAGGAGGGCGGGCGAATGCAGATCGAG
AGGGAAGGAGAGGTGTCTGCGGCGACGAGAAGGATGGAGGCACGGAGGGA
GGAAGGAGAGGAGAGGGTTGCACAGCAGGTGCTTGGCCTAGAGGGTGGGA
TGCCCGCCAAACGACATGgtaaggaggaaggaagggtgggagggcgggag
ggagggagaaggagcctggagaaagggataaagagattccaccgcttaca
tccctgccctcttttctacctcctcccctccctccctccctccctccccc
ccttcctccgttcctccctccctcccttctcttccctacagGTCACTCCT
CCTCCTCCTCCACCACCTCCCCTTCCCAAGCCACGCCAGCCCCCACCCTT
TCGGTCCAAAAACAAAAATACCCTCTCCGTACCAGCAACGGCAGCAGCAG
CAGCAGCAGCAGCAGCAACAACAACAACAAGAACAACAACAACAACAGCA
TGACCTCCCTCTGCTTCCGCCCCCCGCTCCCCTCTGCCTCCTCCCTCCCC
CCCTCCCTCCCCCTCACCCTCTTCCCCTCCATTCCCAAGAGGATCCTCAA
GACCGTAGGGGAGGCCATCAGGGACTGGGATATGATAAACGAGgtgaggg
aaggagaaaggaattgcggattatgaaaatcctaattcaattaaattagc
ctaatagaacgatcttaatttgtaaactgccaacagaacccagtttgatt
atctaaatctgttccattaccaacatcagGGGGATCGGCTATGCCTAGGC
TTGAGCGGGGGCAAGGACTCCCTCACCCTCCTGCACGTGCTACTCCACCT
CCAGgtacctccctccctccctccctccctccctccctccctccctccct
ccctccctgcctccatctcgcttacccctccctgctcccctcccccctcc
ctcagAAAAAAGCACCCATCCGCTTCAGCATCAGCTGTGCTACTGTGGAC
CCCCAAACGCCCTCCTTCGATCCCTCCCCCCTCATCCCCTACGTGAAGGC
CTTAGGTGTACCTTATCACTACCTCAGCCACCCCATCATCGACCAAGCCA
AGgtacaccctccctccctccttccctttctccttcctttgcttcccttc
ccccctttcccgcagccatcatcgtcttttttccttctttcttgactctt
ctttcttctccctcctctatccctctccctccctcccttcctctttccct
tcctcctttcactttttctcttacctccctccgctcccttcaccctcact
ccctcccttcctcttgttctctctcctctatccctctcccccctcccttc
ctctttccctccctcctttcactttttctcttccctccctcccccccctt
tccccccctccctccctccctccctcagATCCAGCTCCAAGGAGACTCCC
TCTGCTCTTTCTGCAGCAGAATGAAGAGGGGCTTGCTCTACACTTGCTGT
GTAGAGCATAATTACAATAAGCTGATCCTCGCCCAGCACCTGGACGACGT
CATCGAGTCCTTGTTCATGTCCCTCATGCACAACGGACAGgtagggaggg
agggagggagggagggagggagggaaggaggtcggcagcgccatccaccc
tgcgatctacatgccacgcgaggaggatcaaactggtctcttgtccctcc
ctccttcccctcctccttccgcagACCCGTACGATGAAGGCGCACTACAC
CGGCGAGCGTGGAGTCCGAGTCATTCGGCCCCTCATCTACACCCGCGAAG
GCGAGACCAAAGCCTTTGCCACCTCCAATCGCCTGCCCATCATCAACGAA
AATTGTCCTGCATGTTTCGAGCAGCCCAAGgtaaggatgaggcttggggc
ccctccctccctccctccacttccccctacccgctcttttttcttctttc
ccccctccggtttctccttgtccggccgcgttgtctcctcgtctctcttt
ttctccttgaccataaattgattcccccctccctgcccccctccccccct
ccctcccttcctccctccctcccagGAGCGAGCCCGAATGAAGAAAATGC
TGAGCAAGGAGGAGTCTCTCATGCCACGGATGTACTCCAACCTCCGCCGG
GGCATCATCCCACTGCTCGACGAGGACATGTACAACGTCATCCAGgcacg
taccctccctcccttcctccctccctccctcccttcctccctccctccct
ccttccctccaactgtccgtgcactctgcgcgttctgtcccgctggccta
gacctcctcattccctctctcgtttccccccctcgtttccccccctccct
cgcagAGCAAGTACGCCGCCATTGAAGAGCGGATCAAGCACCGGAAGGCC
AACAAGGCAGTTGTGGCTACCAAAGGAAAAAAGAAGGAGGGAGAGGGGGA
GAGGGAGGAGGGGGAGGAAGAGAAGGAGGGAGGGGAGGGGAAGGAGGTAG
GGAGAGGGGGGAGGGAGGGAGGGAGGGAGGGGACGAGGGAGGACGCGATG
GGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATTGAAAGGGA
CGGGATGTGAGGGTGGGGTGTGCTTGGGAATGATGGTGGACGAGGAGAGT
GGGCAGAGGGAGTAGAGGGGGAGGGGCAGGTAAGGAGGGAAGGAGGGTGG
TTTGGCATTTGTAGCGGTAGGTTGAAATGAATTGTGGGATTGATTTGTAT
TAGAAAGAATGATTTTGGGATTGATTTGTATTAGAAAGAATGATTGTG

protein sequence of NO03G00680.1

>NO03G00680.1-protein ID=NO03G00680.1-protein|Name=NO03G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=696bp
MIVRGQHSSSSTSSSSSSSSSSFSGGCSYGSGKLRPRPCFLDRESPRYQY
RELIHEPLHPPSRRPSIPSSVFLPSRALPSSLPPSHSSSFPSSAPTDYRE
LTSLRGQQQIQQQQQQQQLQQKKRPSDEQMSHLTANLKRIATFRRGGVGL
GALRPASSALPLSRHPPPPSSSSSSSPSSSSSSLVSTSNGVGPFAIPPFR
GGGKESGKEGGRMQIEREGEVSAATRRMEARREEGEERVAQQVLGLEGGM
PAKRHGHSSSSSTTSPSQATPAPTLSVQKQKYPLRTSNGSSSSSSSSNNN
NKNNNNNSMTSLCFRPPLPSASSLPPSLPLTLFPSIPKRILKTVGEAIRD
WDMINEGDRLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSISCATVDPQTP
SFDPSPLIPYVKALGVPYHYLSHPIIDQAKIQLQGDSLCSFCSRMKRGLL
YTCCVEHNYNKLILAQHLDDVIESLFMSLMHNGQTRTMKAHYTGERGVRV
IRPLIYTREGETKAFATSNRLPIINENCPACFEQPKERARMKKMLSKEES
LMPRMYSNLRRGIIPLLDEDMYNVIQSKYAAIEERIKHRKANKAVVATKG
KKKEGEGEREEGEEEKEGGEGKEVGRGGREGGREGTREDAMGKEEEEEEE
EEEEEEEEEEEEEEEEEEEEGLKGTGCEGGVCLGMMVDEESGQRE*

Synonyms

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