NO29G01710, NO29G01710 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01710 vs. NCBI_GenBank
Match: EWM20296.1 (EF-Hand 1, calcium-binding site [Nannochloropsis gaditana]) HSP 1 Score: 276.2 bits (705), Expect = 8.500e-71 Identity = 136/174 (78.16%), Postives = 159/174 (91.38%), Query Frame = 0
Query: 1 MVIRALVPVILVNAIGAGSIGYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKEDFIEAVAEPERKAMLREMT 175
+V+RAL+PVILVNAIGAG+IGYLE WT+ID+VYYAVI++TTIGYGDLHPDN+ Y++ASIYIPFAV AVGNFV+T+A+YYM +SEE+RRAE+L RKY FEELLAMDENNDGSVDIMEFTIYLLKLWGMVDD IL+AI ARF ELDTD +G LTK +FIEAVAEPER +MLR ++
Sbjct: 280 LVLRALLPVILVNAIGAGTIGYLEGWTEIDIVYYAVISSTTIGYGDLHPDNEATYLVASIYIPFAVVAVGNFVTTIAQYYMGKSEEKRRAEILNRKYAFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDKILEAIYARFHELDTDNTGLLTKANFIEAVAEPERLSMLRALS 453
BLAST of NO29G01710 vs. NCBI_GenBank
Match: XP_005854952.1 (hypothetical protein NGA_0381200, partial [Nannochloropsis gaditana CCMP526] >EKU21404.1 hypothetical protein NGA_0381200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 221.5 bits (563), Expect = 2.500e-54 Identity = 107/131 (81.68%), Postives = 122/131 (93.13%), Query Frame = 0
Query: 10 ILVNAIGAGSIGYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINAR 141
ILVNAIGAG+IGYLE WT+ID+VYYAVI++TTIGYGDLHPDN+ Y++ASIYIPFAV AVGNFV+T+A+YYM +SEE+RRAE+L RKY FEELLAMDENNDGSVDIMEFTIYLLKLWGMVDD IL+AI AR
Sbjct: 1 ILVNAIGAGTIGYLEGWTEIDIVYYAVISSTTIGYGDLHPDNEATYLVASIYIPFAVVAVGNFVTTIAQYYMGKSEEKRRAEILNRKYAFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDKILEAIYAR 131
BLAST of NO29G01710 vs. NCBI_GenBank
Match: XP_005854953.1 (hypothetical protein NGA_0381300 [Nannochloropsis gaditana CCMP526] >EKU21405.1 hypothetical protein NGA_0381300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 146.7 bits (369), Expect = 7.800e-32 Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 0
Query: 44 YGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLW 127
Y DLHPDN+ AY++ASIYIPFAVFAVGNFVST+AEYYM +SE +RRAE+L RKY FEELLAMDENNDGSVDIMEFTIYLLKLW
Sbjct: 6 YSDLHPDNNAAYLVASIYIPFAVFAVGNFVSTVAEYYMQKSERKRRAEILNRKYAFEELLAMDENNDGSVDIMEFTIYLLKLW 88
BLAST of NO29G01710 vs. NCBI_GenBank
Match: EWM20297.1 (EF-Hand 1, calcium-binding site [Nannochloropsis gaditana]) HSP 1 Score: 134.8 bits (338), Expect = 3.100e-28 Identity = 62/81 (76.54%), Postives = 77/81 (95.06%), Query Frame = 0
Query: 1 MVIRALVPVILVNAIGAGSIGYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYM 82
+V+RAL+PVILVNAIGAG+IGYLE WT+ID+VYYAVI++TTIGYGDLHPDN+ Y++ASIYIPFAV AVGNFV+T+A+YY+
Sbjct: 280 LVLRALLPVILVNAIGAGTIGYLEGWTEIDIVYYAVISSTTIGYGDLHPDNEATYLVASIYIPFAVVAVGNFVTTIAQYYV 360
BLAST of NO29G01710 vs. NCBI_GenBank
Match: GAX98744.1 (Hypothetical protein PINS_006629 [Pythium insidiosum]) HSP 1 Score: 108.6 bits (270), Expect = 2.300e-20 Identity = 64/166 (38.55%), Postives = 96/166 (57.83%), Query Frame = 0
Query: 2 VIRALVPVILVNAIGAGSI-GYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAE-----YYMHQSEER-----RRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKED 157
+ +LVP+ + +IG G I G +E W +D YYA+IT TT+G+GDL P ++ A + A Y+P +V +V + + + E M ++E+ A LL +K +ELLAMD + DG V +E+ Y+L G D +D I A+F +LD DGSG+L KED
Sbjct: 191 IAASLVPIFV--SIGCGLIVGAIEGWPVLDCFYYAIITVTTVGFGDLSPKSEAARIYAIFYLPLSVVSVAHAIGSXIEEIGRRRVMKSTKEKFTRSHESATLLLQKISMKELLAMDSDGDGKVSKLEYLSYMLVKLGKADQDDIDGILAQFGKLDKDGSGELDKED 354
BLAST of NO29G01710 vs. NCBI_GenBank
Match: GAY01894.1 (Hypothetical protein PINS_009721 [Pythium insidiosum]) HSP 1 Score: 107.8 bits (268), Expect = 4.000e-20 Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 0
Query: 2 VIRALVPVILVNAIGAGSI-GYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKED 157
+ +LVP+ + +IG G I G +E W +D YYA+IT TT+G+GDL P ++ A + A Y+P +V +V + + ++ EE R ++ K +ELLAM+ + DG V +E+ Y+L G D +D I A+F +LD DGSG+L KED
Sbjct: 191 IAASLVPIFV--SIGCGLIVGAIEGWPVLDCFYYAIITVTTVGFGDLSPKSEAARIYAIFYLPLSVVSVAHAIGSII-------EEIGRRRVMKSKISMKELLAMESDGDGKVSKLEYLSYMLVKLGKADQDDIDGILAQFGKLDKDGSGELDKED 337
BLAST of NO29G01710 vs. NCBI_GenBank
Match: CCI49226.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 101.3 bits (251), Expect = 3.700e-18 Identity = 55/155 (35.48%), Postives = 87/155 (56.13%), Query Frame = 0
Query: 2 VIRALVPVILVNAIGAGSIGYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKED 157
++ AL P I+ + +G +G +E W +D +YY +T TT+G+GD P ++ V A Y+PF+V AV + + + EE R ++ ++ +ELLAMD + DG V +E+ Y+L V+ +D I +FR+LD DGSG L K D
Sbjct: 238 MVCALTPFIM-SIVGGVVLGQMEGWPILDCLYYTTVTITTVGFGDYSPKSNGGRVFAIFYLPFSVIAVAHGIGAVI-------EEINRRAVMKKRISMKELLAMDADGDGQVSKLEYLSYMLVKMNKVEQDDIDRILTQFRKLDRDGSGVLDKND 384
BLAST of NO29G01710 vs. NCBI_GenBank
Match: GAX21292.1 (potassium channel subfamily K member 16 [Fistulifera solaris]) HSP 1 Score: 100.9 bits (250), Expect = 4.900e-18 Identity = 49/156 (31.41%), Postives = 80/156 (51.28%), Query Frame = 0
Query: 8 PVILVNAIGAGSIGYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKEDFIEAVAE 164
P++ +G +G+ E W + +Y+ V TTIG+GD HPD+ L + ++P V +G F++ +A YM + + + LTR ++ AMDENNDG V EF ++L V+ + I + F LD SG + +D + + AE
Sbjct: 202 PILFFVLMGGVMLGHAEGWNMFESIYFTVTAGTTIGFGDYHPDHPLVRLACCFFLPLLVAVLGQFLAAVASVYMKRQRRQAERKFLTRTMTIYDMQAMDENNDGEVQESEFLAFMLVALNKVNKDEITEIMSLFDRLDVSKSGTIDMKDLVVSKAE 357
BLAST of NO29G01710 vs. NCBI_GenBank
Match: XP_008910304.1 (hypothetical protein PPTG_15051 [Phytophthora parasitica INRA-310] >ETI39848.1 hypothetical protein F443_14613 [Phytophthora parasitica P1569] >ETL33370.1 hypothetical protein L916_14150 [Phytophthora parasitica] >ETL86681.1 hypothetical protein L917_13933 [Phytophthora parasitica] >ETM39853.1 hypothetical protein L914_14058 [Phytophthora parasitica] >ETN04377.1 hypothetical protein PPTG_15051 [Phytophthora parasitica INRA-310] >ETO68574.1 hypothetical protein F444_14626 [Phytophthora parasitica P1976] >ETP09693.1 hypothetical protein F441_14483 [Phytophthora parasitica CJ01A1] >ETP37864.1 hypothetical protein F442_14440 [Phytophthora parasitica P10297]) HSP 1 Score: 100.1 bits (248), Expect = 8.300e-18 Identity = 60/167 (35.93%), Postives = 91/167 (54.49%), Query Frame = 0
Query: 2 VIRALVPVILVNAIGAGSI-GYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKEDFIEAVAEPERK 168
+ A VP+++ +I AG I G +E W +D YY +IT TTIG+GDL P ++ A + A Y+P AV V + + ++ E ++ K +ELL MD + DG V +E+ Y+L VD LD I A+F +LD DGSG+L ++D E +R+
Sbjct: 237 IFHAFVPIVI--SIMAGLIVGAIEGWPVLDCFYYTLITITTIGFGDLSPKSESARIFAIFYLPLAVVTVAHGIGSIL-------NEISARSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKVDQDDLDGIIAQFHKLDRDGSGELDRDDLERLDRELQRQ 394
BLAST of NO29G01710 vs. NCBI_GenBank
Match: ETK79952.1 (hypothetical protein L915_14245 [Phytophthora parasitica]) HSP 1 Score: 100.1 bits (248), Expect = 8.300e-18 Identity = 60/167 (35.93%), Postives = 91/167 (54.49%), Query Frame = 0
Query: 2 VIRALVPVILVNAIGAGSI-GYLENWTQIDVVYYAVITATTIGYGDLHPDNDLAYVLASIYIPFAVFAVGNFVSTMAEYYMHQSEERRRAELLTRKYEFEELLAMDENNDGSVDIMEFTIYLLKLWGMVDDGILDAINARFRELDTDGSGQLTKEDFIEAVAEPERK 168
+ A VP+++ +I AG I G +E W +D YY +IT TTIG+GDL P ++ A + A Y+P AV V + + ++ E ++ K +ELL MD + DG V +E+ Y+L VD LD I A+F +LD DGSG+L ++D E +R+
Sbjct: 238 IFHAFVPIVI--SIMAGLIVGAIEGWPVLDCFYYTLITITTIGFGDLSPKSESARIFAIFYLPLAVVTVAHGIGSIL-------NEISARSVMKTKISMKELLDMDADGDGKVSQLEYLCYMLVKLNKVDQDDLDGIIAQFHKLDRDGSGELDRDDLERLDRELQRQ 395 The following BLAST results are available for this feature:
BLAST of NO29G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01710 ID=NO29G01710|Name=NO29G01710|organism=Nannochloropsis oceanica|type=gene|length=1429bpback to top protein sequence of NO29G01710.1 >NO29G01710.1-protein ID=NO29G01710.1-protein|Name=NO29G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bpback to top Synonyms
Publications
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