NO29G01130, NO29G01130 (gene) Nannochloropsis oceanica

Overview
NameNO29G01130
Unique NameNO29G01130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2226
Alignment locationchr29:371777..374002 -

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Properties
Property NameValue
DescriptionRab9 effector protein, putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:371777..374002 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
Homology
BLAST of NO29G01130 vs. NCBI_GenBank
Match: XP_002291010.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91117.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 244.6 bits (623), Expect = 9.800e-61
Identity = 153/417 (36.69%), Postives = 208/417 (49.88%), Query Frame = 0
Query:  315 PQGRWGHTATMVGGNRMVVYGGEG-DDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQDERSDDTIMYDDAFVLDTESWEWKK-VEVEGTKEGGSDKGPGVV-VGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQDP 729
            P  RWG + TM+   R++VYGG+  D     +    DLFV  L                     ++  W KPIN + + R WHSA FL D+ LL+ FGG+ VE          +K       D +MVLDTE+ LWYPP +SG+ PS RSGH+ASL+         NE+V+FGG +   W N++ VLD  RW W TP   G APP RSYHSA  + G +             + G +  +A +                 +V FGGNN   CFD VHVL+          ++   W HP+  G E P  RTGH+A LL+DG +IL+ GGWDP  E  DD +++ D+F+LDT++W W+   +   T         G+  VGH+AVLA              G +GV   +VL+FGG+ P
Sbjct:  294 PCARWGMSMTMIDHKRVLVYGGQTIDPTTQTARPLADLFVYDL---------------------LEKTWTKPINTEGVARCWHSANFLPDRQLLLCFGGDVVE----------EKTGKTITTDQVMVLDTEIMLWYPPTVSGQVPSGRSGHSASLL------HKTNELVVFGGVKNGKWLNSLSVLDTNRWKWSTPKTIGDAPPPRSYHSATAIGGDD-------------TTGETSEAASR-----------------VVVFGGNNDMKCFDTVHVLEQI--------NEKMAWSHPKTSG-EAPSPRTGHSATLLDDGFTILVYGGWDPNTEDGDD-LVFGDSFLLDTKTWTWRSGPKARFTSNNAEATNGGLERVGHSAVLA------------PGGADGV---QVLVFGGRLP 618          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: XP_002177691.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50505.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 232.3 bits (591), Expect = 5.000e-57
Identity = 153/456 (33.55%), Postives = 205/456 (44.96%), Query Frame = 0
Query:  299 PPALTHGSTHRPQG-----APPQGRWGHTATMVGGNRMVVYGGE-GDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNE---IVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQDERSDD--TIMYDDAFVLDTESWEWKKV--EVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQDPGGVRKDDLVVLAV 742
            P  ++ G+  +P G     APP  RWGHT T +G  + +VYGG+  D   G   T  D+ +                         +  W  P+NCD   R WH+AT+L ++ LL+SFGGE              K    +    +MVLDTE+ LWYPP +SG  PS RSGHTA+ V       A N+   +V+FGG +   W N V VLD  RW W TP   G AP  RSYH+A  V                                          R +IV  GGNN    F+ VHVL+             W W HP+V G+  P  RTGH+  LL DGK++ + GGWDP DE + D   +++ D F+LDTE+W W +   E     E G++ G    VGH A+L                 +  +  RV++FGG+ PG     DL  L+V
Sbjct:  300 PARVSLGTPSKPAGPPQSQAPPCPRWGHTFTYIGDQQYLVYGGQTWDATTGLPQTLRDVAI---------------------YHASKKTWYTPLNCDGFCRQWHTATYLPERQLLISFGGEAAS----------PKTGKTKTTHQVMVLDTEIMLWYPPTVSGDVPSGRSGHTATRV-----VHASNDTELLVVFGGVQQTKWLNTVSVLDTTRWCWSTPKTTGAAPKPRSYHTATAV------------------------------------------RGNIVVLGGNNATQAFNTVHVLEPG--------SQTWTWTHPQVRGR-APVARTGHSTTLLADGKTLCVYGGWDPNDEAATDDAEMIFQDCFLLDTETWTWSQPTGETRLVHEQGTN-GGARRVGHAAIL-----------------DQSQPDRVVLFGGRVPGDQFSGDLQSLSV 650          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: OQR86738.1 (Rab9 effector protein [Achlya hypogyna])

HSP 1 Score: 231.5 bits (589), Expect = 8.500e-57
Identity = 159/448 (35.49%), Postives = 205/448 (45.76%), Query Frame = 0
Query:  294 SSLPLPPALTHGSTHRPQ--GAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQDERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQDPGGVRKDDLVVL 740
            SS PL   L  G+  R +  G  P  RWG TAT + GNR+V+YGGE +D                     T  AD    D   +      W +P NC+S+PR WHSA  +  + LL+ FGGER+                ++ L D+MVLDTE FLWYPPA  G  PS RSGHT  L+        G+++V+FGGSRGR   N++ +L  E W W    + G AP  R+YHSAV +             G N                             +V FGGN+ +  FD VHVL+          D  W WFHP   G E P  RTG AA  L D  +++I GGWDPQ     +T ++ D F LDTE+WEWK + +      G  +     VGH AVL               G  G +E  +L+FGGQD    R  D+  L
Sbjct:  213 SSAPLSLQLYTGTYARVEVSGDIPAQRWGATATAIDGNRVVLYGGESED--------------------ETTLADMHVYDAATRS-----WSRPANCESLPRAWHSAVSVPQRKLLLVFGGERL------------VNGAMDSLADLMVLDTECFLWYPPATHGALPSERSGHTMCLL--------GSDVVVFGGSRGRSRMNSIHLLSTEDWAWSNIKVEGRAPQARNYHSAVAM-------------GPN----------------------------RMVIFGGNDTKRSFDSVHVLE------RRAADGAWFWFHPSTSG-EGPAPRTGQAAVAL-DASTLVIYGGWDPQYTAPQNTKLFGDVFALDTETWEWKAIAM--ANADGMQR-----VGHCAVL---------------GNNGAKE--LLIFGGQDVKETRISDVYSL 542          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: OEU13491.1 (hypothetical protein FRACYDRAFT_241823 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 222.6 bits (566), Expect = 4.000e-54
Identity = 138/404 (34.16%), Postives = 187/404 (46.29%), Query Frame = 0
Query:  315 PQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGG-------------RDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDP--QDERSDDTIMYDDAFVLDTESWEWKK---VEVEGTKEGGSDKGPGVVVGHTAVLARVGG 701
            P  RWGHT T V  ++++VYGG   D +G      D+ V            D   G           W  PINC    R WHS+T++  +  +++FGGE+              +      D + VLDTE+ LWYPPA+SG  P+ RSGHTA+           NE+++FGG RG  W N+V +LDV RW W TP I G AP  RSYHSA VV                                       G Q+  +V FGGNN  +CFD VHVL+                         GW+W +P + GK  P  RTGH+A LLEDGK+I++ GGWDP  +DE + +  ++  +++LDT+ W WK+    + + +     D GP    GH A L    G
Sbjct:  344 PPARWGHTMTRVEKDKILVYGGASYDTNGDPIILSDVHV-----------YDPKNGGS---------WHAPINCRGEARQWHSSTYIPGRQQIIAFGGEQT-----------NNKGKTITSDTLRVLDTEIMLWYPPAVSGDVPTGRSGHTATFF------PETNELILFGGVRGSKWLNSVSILDVTRWIWTTPNIVGTAPKPRSYHSATVV---------------------------------------GSQK--MVVFGGNNKSSCFDTVHVLEATSNXXXXXXXXXXXXXXXXXIASTGWKWSNPTIRGK-APLARTGHSATLLEDGKTIMVYGGWDPNEEDELTGEENIFKGSYMLDTQEWTWKEGPSPQPDDSANAIQDCGP-KRCGHAAALNSENG 667          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: XP_008873118.1 (hypothetical protein H310_08961 [Aphanomyces invadans] >ETV98243.1 hypothetical protein H310_08961 [Aphanomyces invadans])

HSP 1 Score: 197.2 bits (500), Expect = 1.800e-46
Identity = 134/432 (31.02%), Postives = 187/432 (43.29%), Query Frame = 0
Query:  310 PQGAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQDERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQDPGGVRKDDLVVLAV 742
            P G PP  RWG TATM+  +R+VVYGGEGDD      T  DLFV  +                      +  W  P+NC+SIPR++H++ ++  KNL++ FGGERV             +   E L D+MVLDTE FLWYPPA+SG PP ARSGH+ +++        G ++++FGGSRGR     V                                                                                 GN+ +  ++ VHVL+         +DD W WF+P VVG   P  RTG  A  L D +++++ GGWDPQ+  +D   +Y D F LDT+SWEW++V +E     G ++     VGH  VL                     +  ++ FGGQD    R++DL  L +
Sbjct:  268 PTGVPPSQRWGCTATMISNHRVVVYGGEGDD----ESTLADLFVYDVA---------------------KAEWSCPLNCESIPRSFHASVYVAAKNLMLVFGGERV------------VDGSHECLSDLMVLDTECFLWYPPAVSGTPPLARSGHSLTVL--------GTDVLVFGGSRGRNRPTTV-----------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDAKKSYNSVHVLE------HNSQDDSWTWFNPCVVG-NGPNARTGQVAIAL-DHRTVVVHGGWDPQN--ADKVQLYGDIFALDTDSWEWRRVHMEDA--AGMER-----VGHVGVL-------------------TSDNALMYFGGQDATEARRNDLAQLTL 577          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: XP_024578130.1 (Kelch repeat-containing proteins [Plasmopara halstedii] >CEG41761.1 Kelch repeat-containing proteins [Plasmopara halstedii])

HSP 1 Score: 195.3 bits (495), Expect = 6.800e-46
Identity = 142/431 (32.95%), Postives = 181/431 (42.00%), Query Frame = 0
Query:  312 GAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQ-DERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQDPGGVRKDDLVVLAV 742
            G+ P  RWGHTAT +   R+VVYGG  DD      T GDL +  +                        RW  PINC++I RTWH A FL  KNL++ FGGER              E   ++L DIMVLDTE FLWYPPAI G PPSARSGHT +++        GNE+V+FGGSRGR  Q                                                ++                                         F+ VHVL+  +    G     W W HP V G   P++RTGH+A LL +G+ ILI GGWDPQ D+ +  T ++DDAF+L+T +WEW+       K   +D      VGH AVL   G                   R+ +FGGQ+    R  D+  L V
Sbjct:  207 GSKPLERWGHTATKISDERVVVYGGTDDD----ERTLGDLHIFDM---------------------KTHRWTTPINCETIARTWHDAVFLSSKNLVLVFGGER----------SATAEGEFDILSDIMVLDTECFLWYPPAIQGSPPSARSGHTCTVI--------GNEVVVFGGSRGRNRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKS-----------------------------------------FNSVHVLQKVDVKPSG---SSWTWVHPCVTGVP-PQERTGHSATLLNNGE-ILIFGGWDPQRDDANASTNVFDDAFLLNTITWEWQPTTFNNDK--NADTLMRGRVGHGAVLDCNG-------------------RLHLFGGQNGVEQRLKDICALTV 527          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: XP_008898674.1 (hypothetical protein PPTG_06499 [Phytophthora parasitica INRA-310] >ETI31209.1 hypothetical protein F443_21793 [Phytophthora parasitica P1569] >ETK71609.1 hypothetical protein L915_21186 [Phytophthora parasitica] >ETL78263.1 hypothetical protein L917_20914 [Phytophthora parasitica] >ETM31527.1 hypothetical protein L914_20928 [Phytophthora parasitica] >ETN16335.1 hypothetical protein PPTG_06499 [Phytophthora parasitica INRA-310] >ETO59931.1 hypothetical protein F444_21815 [Phytophthora parasitica P1976] >ETP01028.1 hypothetical protein F441_21674 [Phytophthora parasitica CJ01A1] >ETP29166.1 hypothetical protein F442_21651 [Phytophthora parasitica P10297])

HSP 1 Score: 194.5 bits (493), Expect = 1.200e-45
Identity = 148/432 (34.26%), Postives = 180/432 (41.67%), Query Frame = 0
Query:  297 PLPPALTHGSTHRPQGAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQ-DERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQD 728
            P P A          G  P  RWGHTAT +   R+VVYGG  DD             CTL             GD         RW  P+NCD+  RTWH A +L  KNL++ FGGER              E  +++L DIMVLDTE FLWYPPAI G PPSARSGHT + V        GNE+V+FGGS GR                                          R                                                   F+ VHVL+  E   + G    W WFHP VVG   P++RTGH+A LL DGK IL+ GGWDPQ D+ S  T ++ DAF+LDT +WEW+      T EG +D      VGH AVL   G       G+   E+ +++T  L    QD
Sbjct:  214 PKPAAALKWEIVEALGTAPPERWGHTATKISEERVVVYGGTDDD------------ECTL-------------GDLHVFDMKTHRWSTPLNCDTNTRTWHDAVYLSSKNLVLVFGGER----------NATTEGELDILSDIMVLDTECFLWYPPAIQGSPPSARSGHTCTAV--------GNEVVVFGGSGGR-----------------------------------------NRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSFNAVHVLQKVE---KKGSGVVWSWFHPCVVGVP-PQERTGHSATLLSDGK-ILVFGGWDPQRDDASAPTSVFSDAFLLDTNTWEWQPAAY--TDEGSADTALRGRVGHGAVLDCNGNVH-IFGGQNGVEQRLKDTCTLTVSQQD 553          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: ETL25050.1 (hypothetical protein L916_21058, partial [Phytophthora parasitica])

HSP 1 Score: 194.5 bits (493), Expect = 1.200e-45
Identity = 148/432 (34.26%), Postives = 180/432 (41.67%), Query Frame = 0
Query:  297 PLPPALTHGSTHRPQGAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQ-DERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQD 728
            P P A          G  P  RWGHTAT +   R+VVYGG  DD             CTL             GD         RW  P+NCD+  RTWH A +L  KNL++ FGGER              E  +++L DIMVLDTE FLWYPPAI G PPSARSGHT + V        GNE+V+FGGS GR                                          R                                                   F+ VHVL+  E   + G    W WFHP VVG   P++RTGH+A LL DGK IL+ GGWDPQ D+ S  T ++ DAF+LDT +WEW+      T EG +D      VGH AVL   G       G+   E+ +++T  L    QD
Sbjct:  211 PKPAAALKWEIVEALGTAPPERWGHTATKISEERVVVYGGTDDD------------ECTL-------------GDLHVFDMKTHRWSTPLNCDTNTRTWHDAVYLSSKNLVLVFGGER----------NATTEGELDILSDIMVLDTECFLWYPPAIQGSPPSARSGHTCTAV--------GNEVVVFGGSGGR-----------------------------------------NRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSFNAVHVLQKVE---KKGSGVVWSWFHPCVVGVP-PQERTGHSATLLSDGK-ILVFGGWDPQRDDASAPTSVFSDAFLLDTNTWEWQPAAY--TDEGSADTALRGRVGHGAVLDCNGNVH-IFGGQNGVEQRLKDTCTLTVSQQD 550          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: KUF81964.1 (RING finger protein B [Phytophthora nicotianae])

HSP 1 Score: 194.5 bits (493), Expect = 1.200e-45
Identity = 148/432 (34.26%), Postives = 180/432 (41.67%), Query Frame = 0
Query:  297 PLPPALTHGSTHRPQGAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQ-DERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQD 728
            P P A          G  P  RWGHTAT +   R+VVYGG  DD             CTL             GD         RW  P+NCD+  RTWH A +L  KNL++ FGGER              E  +++L DIMVLDTE FLWYPPAI G PPSARSGHT + V        GNE+V+FGGS GR                                          R                                                   F+ VHVL+  E   + G    W WFHP VVG   P++RTGH+A LL DGK IL+ GGWDPQ D+ S  T ++ DAF+LDT +WEW+      T EG +D      VGH AVL   G       G+   E+ +++T  L    QD
Sbjct:  178 PKPAAALKWEIVEALGTAPPERWGHTATKISEERVVVYGGTDDD------------ECTL-------------GDLHVFDMKTHRWSTPLNCDTNTRTWHDAVYLSSKNLVLVFGGER----------NATTEGELDILSDIMVLDTECFLWYPPAIQGSPPSARSGHTCTAV--------GNEVVVFGGSGGR-----------------------------------------NRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSFNAVHVLQKVE---KKGSGVVWSWFHPCVVGVP-PQERTGHSATLLSDGK-ILVFGGWDPQRDDASAPTSVFSDAFLLDTNTWEWQPAAY--TDEGSADTALRGRVGHGAVLDCNGNVH-IFGGQNGVEQRLKDTCTLTVSQQD 517          
BLAST of NO29G01130 vs. NCBI_GenBank
Match: XP_002902782.1 (Rab9 effector protein, putative [Phytophthora infestans T30-4] >EEY55952.1 Rab9 effector protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 193.4 bits (490), Expect = 2.600e-45
Identity = 147/446 (32.96%), Postives = 179/446 (40.13%), Query Frame = 0
Query:  297 PLPPALTHGSTHRPQGAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGDLFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATFLKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYPPAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLDVERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSPTSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREGGRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQ-DERSDDTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGGYRGEEEGEGEGEEGVRETRVLMFGGQDPGGVRKDDLVVLAV 742
            P P A          G  P  RWGHTAT +   R+VVYGG  DD      T GDL V  +                        RW  P+NC++I RTWH A +L  KNL++ FGGER              E  +++L DIMVLDTE  LWYPPAI G PPSARSGHT + V        GNE+V+FGGS GR                                          R                                                   F+ VHVL+  E          W WFHP VVG   P++RTGH+A LL DGK ILI GGWDPQ D+ +  T ++ D F+LDT +WEW+ V      EG +D      VGH A L  +G                    V +FGGQ+    R  D+  L V
Sbjct:  215 PKPAAAAKWEMVEALGNAPPERWGHTATKISEERVVVYGGTDDD----ERTLGDLHVFDM---------------------KTHRWSTPLNCETITRTWHDAVYLPSKNLVLVFGGER----------NAAAEGEIDILSDIMVLDTECLLWYPPAIRGSPPSARSGHTCTAV--------GNEVVVFGGSGGR-----------------------------------------NRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNAVHVLQKMEKKASAA---VWTWFHPCVVGVP-PQERTGHSATLLNDGK-ILIFGGWDPQRDDATAATSVFSDVFLLDTNTWEWQPVTY--ADEGSADTALRGRVGHGAALDCIG-------------------NVHLFGGQNGAEQRLKDICTLTV 550          
The following BLAST results are available for this feature:
BLAST of NO29G01130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002291010.19.800e-6136.69predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002177691.15.000e-5733.55predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OQR86738.18.500e-5735.49Rab9 effector protein [Achlya hypogyna][more]
OEU13491.14.000e-5434.16hypothetical protein FRACYDRAFT_241823 [Fragilario... [more]
XP_008873118.11.800e-4631.02hypothetical protein H310_08961 [Aphanomyces invad... [more]
XP_024578130.16.800e-4632.95Kelch repeat-containing proteins [Plasmopara halst... [more]
XP_008898674.11.200e-4534.26hypothetical protein PPTG_06499 [Phytophthora para... [more]
ETL25050.11.200e-4534.26hypothetical protein L916_21058, partial [Phytopht... [more]
KUF81964.11.200e-4534.26RING finger protein B [Phytophthora nicotianae][more]
XP_002902782.12.600e-4532.96Rab9 effector protein, putative [Phytophthora infe... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005236NSK005236Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01130.1NO29G01130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01130.1NO29G01130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01130 ID=NO29G01130|Name=NO29G01130|organism=Nannochloropsis oceanica|type=gene|length=2226bp
ATGGGAGGCACCACAAGGCCTCTGCCCCCCACCAACACGACAATTAATTA
CCACGGCACAAACATTGAGCTAAGTGCACTTCCCGAGGTGGAGTTCCTGG
CGGATGGGAGTTTGTGTCTGTCCTTCACCAACTACACAGGGTCCATTGTC
CTCCGCCCCTCCGCGGCCGAGGCTGCTGGTACTGCACCTGCTGTCCACAT
CATTAGTACTACCAGCACCAGTGGTGGGGGTGGTGGTAAGAGAGGAAGTA
ATGCAGCGAAATTCACACCTAGCCCTGCTGCAGCGGGGGCTCGTGCGTTG
ATCTCTGCTGCTGCAATTCCTGCGGCTGCAACAACAACGGGAAAAATAGC
CACAACGAAAGGCGGAAAGGGGAAGAAGGGACAAGTGGAGAAAGCCAAGA
AGCAGAATAAATTGCAGCCACAACACCAGCCGCTCACAAGGGAAGACCTT
CAAGAGCTCGAAGATGAGGACGAAGACGACGACCTAGCCGTCCCTCTCGC
ACAGCCCGACGAGAAGGAAAACCAGCGTCCTCCCCACCCTTCCTCCTCCT
CTTCCTCCTCCTCTCGTCCTAACCCTCGCAGCAATACTAGTCAGAAGATC
GCGACATCATCAAAGAAACGGGGGAAGAAGCAGCGGCAGCGCGACCAAGA
AGATAGGAATGAAGGAGACACCAGCGACGGTATTCAGAAAGATCAGAACG
AGGATGATGACCCCTTCAAAGGCATAGAGGAACTCTTGGCCTCATCTTCC
TCCTTTCCCTCCTCCTCCACCCCCACGGAGCTTAATAACCGCAAGCCCTC
CTCCTCTTCCCTGTCCACTACCTCCCGCCGAACTAAGAAGGCCCGCTCTT
CCTCCTCCCCTTCGTCAACCAGCACCCTCTCCTCCCTCCCTCTCCCCCCC
GCCCTCACCCACGGCAGCACTCACCGGCCTCAAGGCGCCCCTCCCCAGGG
AAGGTGGGGACATACTGCTACGATGGTGGGAGGGAATAGAATGGTGGTGT
ATGGAGGGGAAGGTGATGACGTGGACGGGAAGAGCCACACATTCGGGGAT
CTATTCGTGTGTACTTTAGTACCGGTAGCCCCTACTCCCACTGCTGATGC
TGTTGCCGGCGATAAACAAGAGCAGCAGCAGATGCAGGTGCGGTGGGAGA
AGCCGATAAACTGCGACTCGATCCCCAGGACCTGGCACTCGGCCACGTTT
CTGAAGGATAAAAACCTTCTGGTGTCTTTTGGGGGGGAACGAGTGGAGAT
GCCCAAGCTAGTGAGGGAGGAGGGATGGAAGAAGGAGGCGTTGGTGGAGG
TGCTTGACGATATAATGGTTTTAGATACAGAGCTGTTCTTGTGGTACCCA
CCTGCAATTTCGGGAAAGCCGCCCTCGGCGCGGTCGGGACACACAGCCAG
TTTGGTGGGAGGAGGAGGGGAGGGAGGAGCGGGAAATGAGATTGTTATTT
TTGGGGGCAGCAGGGGAAGGGGGTGGCAAAATAATGTGTGTGTGCTGGAT
GTGGAGAGGTGGCATTGGCGTACTCCAGTAATTGCGGGCGTGGCTCCTCC
TGGGCGCTCTTATCATTCCGCGGTGGTGGTGGTGGGGGTGGAGGAAAGAA
GGAAGGAGGGAGGGAGGAAGGGGAGGAACTTATCGGTGGGGTCTTCGCCT
ACTTCTGCTATGAAGGAGGAGGAAGGAAAAGAGGGAAGAGGGGTTGGGGG
GGGGCAGAGGACATCGATTGTTTATTTTGGGGGGAATAATGGGGAGACAT
GTTTCGATAAGGTCCATGTGTTGAAGGTGGCAGAGGGCGGGAGGGAGGGA
GGGAGGGACGACGGGTGGGAATGGTTCCACCCGGAGGTGGTGGGGAAGGA
GAGGCCTAAAAAGAGGACGGGCCACGCGGCGTGTTTGCTGGAGGATGGGA
AATCGATTTTGATTCAGGGAGGATGGGACCCACAGGACGAAAGAAGCGAC
GATACGATCATGTATGACGATGCCTTTGTGCTGGACACGGAGAGTTGGGA
GTGGAAGAAGGTGGAGGTGGAGGGGACGAAGGAGGGAGGGAGTGATAAGG
GTCCTGGGGTGGTGGTAGGGCACACGGCGGTTTTGGCCAGGGTGGGGGGT
TATAGAGGAGAGGAGGAGGGGGAGGGGGAGGGAGAGGAGGGAGTAAGGGA
GACGAGGGTTTTGATGTTTGGGGGACAGGATCCGGGTGGGGTGCGGAAGG
ATGATCTGGTGGTGCTGGCGGTGTGA
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protein sequence of NO29G01130.1

>NO29G01130.1-protein ID=NO29G01130.1-protein|Name=NO29G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MGGTTRPLPPTNTTINYHGTNIELSALPEVEFLADGSLCLSFTNYTGSIV
LRPSAAEAAGTAPAVHIISTTSTSGGGGGKRGSNAAKFTPSPAAAGARAL
ISAAAIPAAATTTGKIATTKGGKGKKGQVEKAKKQNKLQPQHQPLTREDL
QELEDEDEDDDLAVPLAQPDEKENQRPPHPSSSSSSSSRPNPRSNTSQKI
ATSSKKRGKKQRQRDQEDRNEGDTSDGIQKDQNEDDDPFKGIEELLASSS
SFPSSSTPTELNNRKPSSSSLSTTSRRTKKARSSSSPSSTSTLSSLPLPP
ALTHGSTHRPQGAPPQGRWGHTATMVGGNRMVVYGGEGDDVDGKSHTFGD
LFVCTLVPVAPTPTADAVAGDKQEQQQMQVRWEKPINCDSIPRTWHSATF
LKDKNLLVSFGGERVEMPKLVREEGWKKEALVEVLDDIMVLDTELFLWYP
PAISGKPPSARSGHTASLVGGGGEGGAGNEIVIFGGSRGRGWQNNVCVLD
VERWHWRTPVIAGVAPPGRSYHSAVVVVGVEERRKEGGRKGRNLSVGSSP
TSAMKEEEGKEGRGVGGGQRTSIVYFGGNNGETCFDKVHVLKVAEGGREG
GRDDGWEWFHPEVVGKERPKKRTGHAACLLEDGKSILIQGGWDPQDERSD
DTIMYDDAFVLDTESWEWKKVEVEGTKEGGSDKGPGVVVGHTAVLARVGG
YRGEEEGEGEGEEGVRETRVLMFGGQDPGGVRKDDLVVLAV*
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Synonyms
Publications