NO28G01400, NO28G01400 (gene) Nannochloropsis oceanica

Overview
NameNO28G01400
Unique NameNO28G01400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4336
Alignment locationchr28:437321..441656 -

Link to JBrowse

Properties
Property NameValue
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:437321..441656 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506iron ion binding
GO:0030246carbohydrate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR006620Pro_4_hyd_alph
Homology
BLAST of NO28G01400 vs. NCBI_GenBank
Match: CBJ26831.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 289.3 bits (739), Expect = 2.300e-74
Identity = 133/204 (65.20%), Postives = 163/204 (79.90%), Query Frame = 0
Query:  294 YPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRIPLI 498
            YPG+R +   PP+Y++D+F S  EC AL+A A   +I +PVVGAG G++S SRTSS+C+LARED+P++ HK+  LTGKP EH+ELPQVGRY  SQ+Y  H+DAFDL+TEDGRRFA+NGGQRV TVL+YLN V SGGCT F  L + + P +G+AVVFFPA+LDG LD R LHAAEPAID KWVSQ+WIRQG+Y G PT RIP I
Sbjct:   91 YPGLRNLRETPPLYVVDDFFSGPECDALIALAGNYMIVSPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPTARIPAI 294          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: GAX27364.1 (hypothetical protein FisN_17Lh253 [Fistulifera solaris])

HSP 1 Score: 272.7 bits (696), Expect = 2.200e-69
Identity = 129/203 (63.55%), Postives = 157/203 (77.34%), Query Frame = 0
Query:  292 PSYPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRI 495
            PSYPG+R+++  PP++ ++NFL+P EC  L+ AA   L  APVVG G G++S SRTSSTCYLARED+  L+ K+ LLTGKP EH ELPQVGRY   ++Y QHFDAFDL TEDGRRFA NGGQR  TVLIYLN V+ GG T F  LNL I P +G+A+VFFPA++DG LD  ALHAA PAID K+VSQVWIRQ +Y G P++R+
Sbjct:   11 PSYPGLRVLNNSPPIFAVENFLTPYECDFLIHAAVDGLGPAPVVGKGAGEISPSRTSSTCYLAREDLGDLMRKVTLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSTYNGQPSKRL 213          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: GAX13312.1 (hypothetical protein FisN_17Hh253 [Fistulifera solaris])

HSP 1 Score: 271.9 bits (694), Expect = 3.800e-69
Identity = 129/203 (63.55%), Postives = 157/203 (77.34%), Query Frame = 0
Query:  292 PSYPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRI 495
            PSYPG+R+++  PP++ ++NFL+P EC  L+ AA  +L  APVVG G G++S SRTSSTCYLARED+  L+ K+ LLTGKP EH ELPQVGRY   ++Y QHFDAFDL TEDGRRFA NGGQR  TVLIYLN V+ GG T F  LNL I P +G+A+VFFPA++DG LD  ALHAA PAID K+VSQVWIRQ  Y G P++R+
Sbjct:   11 PSYPGLRVLNNSPPIFAVENFLTPYECDFLIHAAVDALGPAPVVGKGAGEISPSRTSSTCYLAREDLGDLMRKVSLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPSKRL 213          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_002182153.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46054.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 253.1 bits (645), Expect = 1.800e-63
Identity = 119/188 (63.30%), Postives = 144/188 (76.60%), Query Frame = 0
Query:  299 LVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSY 487
            +++  PPM+ +DNFL+P EC+ L+  A+ S   APVVG G G++S SRTSSTCYL+RED+P L+ K+  LTGKP EH ELPQVGRY  SQ+Y QH+DAFDL TEDG RFA NGGQR  TVL+YLN V  GG T F  LNL + P QG+A+VFFPA++DG LD  ALHAA PA+D K+VSQVWIRQG Y
Sbjct:    1 VLNTSPPMFAVDNFLTPLECEFLIHMAQDSFGPAPVVGKGAGEVSPSRTSSTCYLSREDLPDLMRKVSSLTGKPIEHCELPQVGRYFPSQQYLQHYDAFDLGTEDGLRFAANGGQRTITVLLYLNDVARGGATRFPALNLDVQPRQGMALVFFPATIDGMLDRMALHAAMPAVDTKYVSQVWIRQGHY 188          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_009035958.1 (hypothetical protein AURANDRAFT_14928, partial [Aureococcus anophagefferens] >EGB09933.1 hypothetical protein AURANDRAFT_14928, partial [Aureococcus anophagefferens])

HSP 1 Score: 248.1 bits (632), Expect = 5.900e-62
Identity = 116/180 (64.44%), Postives = 140/180 (77.78%), Query Frame = 0
Query:  304 PPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQ 484
            PP+Y + NFL+ EEC AL+ +AK  +  APVVG GNG++S SRTSSTCYLARED+PS+  K+C LTGKP EH+ELPQVGRY   + YK H+DAFD  + DGRRFA+NGGQRVATVL+YLN V  GG T F  L + I P +G A++FFPA+LDG LD   LHAAEPA+D KWVSQ+WIRQ
Sbjct:    1 PPIYTVQNFLTEEECDALIDSAKDHMTPAPVVGPGNGEVSVSRTSSTCYLAREDLPSVCTKVCALTGKPLEHLELPQVGRYRGGEFYKPHYDAFDTSSADGRRFAQNGGQRVATVLVYLNDVERGGETSFSKLGVRIKPRKGNALIFFPATLDGVLDQNYLHAAEPAVDPKWVSQIWIRQ 180          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_002291983.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED90834.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 222.2 bits (565), Expect = 3.500e-54
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 0
Query:  304 PPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAI 472
            PP++ ++NFL+P EC  L+ A+  +L  APVVG G G++S SRTSSTCYLARED+P  L K+ +LTGKP EH ELPQVGRYL SQ+Y QHFDAFDL  EDGRRFA NGGQR  TVL YLN V  GG T F  LN+ + P +G+AVVFFP++LDG LD  ALHAA PA+
Sbjct:    1 PPVFSVENFLTPAECDFLIHASNDALGPAPVVGKGAGEVSPSRTSSTCYLAREDLPEYLRKVGVLTGKPAEHCELPQVGRYLPSQQYLQHFDAFDLSNEDGRRFAANGGQRTITVLTYLNDVPRGGATSFPNLNIQVQPRRGMAVVFFPSTLDGLLDKMALHAAMPAV 168          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: KOO22018.1 (prolyl 4-hydroxylase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 214.9 bits (546), Expect = 5.600e-52
Identity = 108/206 (52.43%), Postives = 137/206 (66.50%), Query Frame = 0
Query:  294 YPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLARE--DVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQG-SYAGVPTRRIPL 497
            YPG++ VH  PP+YL+++FL+ EECQAL+  A   L R+    A   + +  RTS TC+LA+     P LL KI  LT KP  H+ELPQV RY +SQ Y +H+D  D  TE GR F   GGQRVATVL+YLN V  GGCTHF+ L+LSI P +G A++FFP  L+G LD  ALHA  PA+D KWVSQVWIR+     G P+  +P+
Sbjct:   92 YPGLKRVHDSPPVYLVEDFLTDEECQALIETAGPLLQRSKTHAAAGSEATKGRTSLTCHLAKHVYPCPILLKKIHNLTNKPYGHMELPQVARYASSQRYVEHYDGVDPHTEAGRSFCAAGGQRVATVLVYLNEVSEGGCTHFKRLDLSIKPDKGTALIFFPGFLNGELDTDALHAGMPAVDTKWVSQVWIRKAFREDGQPSSPVPI 297          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_005774320.1 (hypothetical protein EMIHUDRAFT_424641 [Emiliania huxleyi CCMP1516] >XP_005791598.1 hypothetical protein EMIHUDRAFT_423042 [Emiliania huxleyi CCMP1516] >EOD21891.1 hypothetical protein EMIHUDRAFT_424641 [Emiliania huxleyi CCMP1516] >EOD39169.1 hypothetical protein EMIHUDRAFT_423042 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45
Identity = 96/194 (49.48%), Postives = 126/194 (64.95%), Query Frame = 0
Query:  292 PSYPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAR--EDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQ 484
            P +PG+R ++ +PP+Y+ D+FLS +EC ALM  A   L R+        + +  RTS TC+L++  +  P+LL KI  LTGKP +H+ELPQV RY   Q Y +H+D  D  T  G+ F  +GGQR+ TVL+YLN    GG T FR LNL I P +G+AV+FFP  L+G LD  ALHA  P +  KWVSQVWIRQ
Sbjct:   76 PDHPGLRRINERPPIYVCDDFLSDDECAALMQVATPLLQRSKTHAVAGSEATRGRTSLTCHLSKKADPCPALLSKIQALTGKPFDHMELPQVARYTEGQRYVEHYDGVDPHTTAGKAFCASGGQRIGTVLMYLNVPEGGGGTFFRRLNLEIKPKKGMAVIFFPGFLNGELDLDALHAGLPPVGTKWVSQVWIRQ 269          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_005791597.1 (hypothetical protein EMIHUDRAFT_439880 [Emiliania huxleyi CCMP1516] >EOD39168.1 hypothetical protein EMIHUDRAFT_439880 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 193.0 bits (489), Expect = 2.300e-45
Identity = 96/192 (50.00%), Postives = 124/192 (64.58%), Query Frame = 0
Query:  294 YPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAR--EDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQ 484
            YPG++ +H QPP+Y+  +FLS +EC ALM  A   L R+        + +  RTS TC+L++  +  P+LL KI  LTGKP +H+ELPQV RY   Q Y +H+D  D  T  G+ F  +GGQR+ TVL+YLN    GG T FR LNL I P +G+AV+FFP  L+G LD  ALHA  P +  KWVSQVWIRQ
Sbjct:   34 YPGLKRIHEQPPIYVCHDFLSDDECAALMQVATPLLQRSKTHAVAGSEATRGRTSLTCHLSKKADPCPALLSKIQALTGKPFDHMELPQVARYTEGQRYVEHYDGVDPHTTAGKAFCASGGQRIGTVLMYLNVPEGGGGTFFRRLNLEIKPKKGMAVIFFPGFLNGELDLDALHAGLPPVGTKWVSQVWIRQ 225          
BLAST of NO28G01400 vs. NCBI_GenBank
Match: OEU08314.1 (hypothetical protein FRACYDRAFT_153725, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 193.0 bits (489), Expect = 2.300e-45
Identity = 98/172 (56.98%), Postives = 122/172 (70.93%), Query Frame = 0
Query:  304 PPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVS---GGCTHF-RCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAI 472
            PP+Y++D FL+ +E Q L+ AA  S   APVVG G+G +S +RTSSTCYLARED+P L  K+  LT  P  H+ELPQVGRY  SQ+Y  H+DAFD +  DG RFA NGGQR  TVLIYLN V +   GG T F +  N++I P +G A++FFPA++DG LD R LHAA PAI
Sbjct:    1 PPIYIVDQFLNDDETQFLIDAASDSFTPAPVVGVGSGVISDTRTSSTCYLAREDLPDLARKVSALTQTPITHLELPQVGRYYTSQQYLPHYDAFDTEEVDGARFASNGGQRTVTVLIYLNTVTTNTGGGHTVFPKLQNVNIQPIRGQALIFFPATIDGHLDPRTLHAALPAI 172          
The following BLAST results are available for this feature:
BLAST of NO28G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ26831.12.300e-7465.20conserved unknown protein [Ectocarpus siliculosus][more]
GAX27364.12.200e-6963.55hypothetical protein FisN_17Lh253 [Fistulifera sol... [more]
GAX13312.13.800e-6963.55hypothetical protein FisN_17Hh253 [Fistulifera sol... [more]
XP_002182153.11.800e-6363.30predicted protein, partial [Phaeodactylum tricornu... [more]
XP_009035958.15.900e-6264.44hypothetical protein AURANDRAFT_14928, partial [Au... [more]
XP_002291983.13.500e-5463.69predicted protein, partial [Thalassiosira pseudona... [more]
KOO22018.15.600e-5252.43prolyl 4-hydroxylase [Chrysochromulina sp. CCMP291... [more]
XP_005774320.11.300e-4549.48hypothetical protein EMIHUDRAFT_424641 [Emiliania ... [more]
XP_005791597.12.300e-4550.00hypothetical protein EMIHUDRAFT_439880 [Emiliania ... [more]
OEU08314.12.300e-4556.98hypothetical protein FRACYDRAFT_153725, partial [F... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01400.1NO28G01400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101456g1gene9572Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01400.1NO28G01400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01400 ID=NO28G01400|Name=NO28G01400|organism=Nannochloropsis oceanica|type=gene|length=4336bp
GATAGCTATTGCCTTCGTCATGCTGTTAGTACATGCAGCCTTTACTAACC
CACACGCAAACTCTCTGCCTCCCTCTACAGAAGACGATCGCTTATCGTGC
CCATAAACGTGCCACAAACGTGGCCTTTGAGGAAAACAACAACACCAGAA
TCTCCCTTTCCAAGGCGCGATCGTCGCCTCCCTCGCTCTCCGCAGTGTCA
GTCTCCCTGTGTCTCCCTCGTCCTTTCCAATGGTGGGCGCTAGCCAAGAC
CTGTACGACCATGAGCAGCAGCTGCAGCACCAACATCAAGTGCAGCAGCA
GGAGCAGCAACAGCAACTGCAGCAGCAACAACAGCAGCACGACCTCAGTG
GCATTAGCTTGCCAGTAACAGGGGCCGCCTACATCGGCCGTGTCGGCGGC
GGGGGTGCTGTAGGAGTAGGAGGAGGCGCCCTTCCTCCACCGTCGGCTCC
CCCCTTTCTCCCTACAACTCCTTCATTCTCATTCGGGGCCTCTCATAGTC
CTCCATCCAGCTCTTTTGCATCACCAGATATGTCACTACCGAAGACGGAG
GGAGGAGCAACAGGGATGGGAAGGGGACTGCTCCCCTCGTCCTCTTCCTC
TTCCTCCTCCTCCGCCACCACTTTTCTCACGATGCCTTCTCCTTACTTTC
CTCTCCCAGCAGCACCAGGAGAAGATGAAAGACAAGACGGAGGAAGGAGC
ACGAGGTTCAGCACACGAAACTGCTCTTCTCCTTCCTCCCTCCCTCCCCC
CTCCTCCTTCCACACTTCCTCCCTCCCATCCTCCCAAGCTCAGCCCCCGC
CGATCCCCTCGTCCTCCTTCCAATCTTCCTCTTCCTATCCAACCCTCGAT
GACGGGGCCATGCTAGCCATGTCCCTCCCTCCCTCCCTCCCTCCCTCCTT
CCCTCAATTTTCGGCCATCCCGTCGCAGCAGCAGCAGCATCTACAGCAGC
AGCATCTACAGCAGCAGCAGCTGCAGCAGCAACAACTACAACTACTACAG
CAACAACAACAATTGCAACAGCAGCAGCTAATAGTGCAGCAGCAGCAGCA
GATACTGCAACATCAGCAACAGCAATTGCAGCGACAGTATCTGATCCTCA
ACCCCTCTTATCCGGGGATAAGGCTTGTGCACGCCCAGCCGCCCATgtaa
ggagggaaagagggagggagggagggagggagggaaggagggagggaggg
gagctagggagagaggccaggtcgtaatgcgaggaggtggataatgagca
gagatgtagtggtgcttatcgtgttacgcgaaacgacgaaaggaaatgaa
caggagcggaagtgaaaatgacccaccccttcgtccctccctccctccct
ccctccctccctccctccctcccgcccgccccagGTACCTCATTGACAAT
TTTCTGTCGCCCGAGGAATGCCAAGCGTTGATGGCCGCAGCCAAAGGCTC
CCTCATTCGCGCCCCCGTGGTGGGTGCCGGGAATGGACAGCTGAGTGGCA
Ggtacggcagcacggagggagggaaggaaggaagaagggaggaaagggga
gccgggaagaaaatgtgcattgctcatcccactcttctccccctgcctcc
ctcccttcctccctccagCCGTACCTCCTCCACGTGCTATTTGGCGAGGG
AAGACGTGCCTTCTCTCCTCCACAAAATATGCCTCTTAACGGGCAAGCCT
CAAGAACACATCGAGCTCCCTCAAGTTGGCCGgtacgtcgccctccctcc
ctccctccctccctccctccctcccttctcttctttctccatctctctct
ctcagaggcatgcgccatcgtgtcagcctcaaaatgacacccattttcat
gcctttccctgcactcttcatcttcttctttttgccccccccttctctcc
ctccccccctccctccctctctagCTACCTTGCCTCCCAAGAGTACAAGC
AGCATTTTGATGCTTTTGACCTCGACACGGAAGACGGGCGACGATTTGCA
GAGAATGGAGGGCAGAGGGTGGCGACGgtagggagggagggaaggaggga
tgatcaacatgaaccaccgagcatttatacttccctccctcccctcccct
ccctccctccttccctcccctcccgcagGTCCTCATCTACCTCAACCACG
TCGTGTCCGGCGGTTGTACCCACTTCCGGTGCCTCAATCTCTCCATTACA
CCCACGCAGGGCCTGGCCGTTGTCTTCTTCCCCGCCTCCCTCGACGGGTG
CCTCGATGACCGGgtgggcaatcacgccctccctccctccctccctgact
accttctaatactcttcctccctctctggcactcatcctccttctacttc
cctcactcttctactctctctcccagGCCCTGCACGCCGCCGAGCCCGCC
ATCGATGAGAAGTGGGTCTCTCAAGTATGGATCAGGCAGGGGTCTTACGC
CGgtgcgtgcccctccctccctccctccttgtccttcctccatcactttc
gttgcctccgacactctcttcccccccccccaagtcctcgctctcctctt
cggcagacgggaggttaataggcgcctttcctctctcgtctcttccacgc
acaaccctacgttctctttttctctgacttataattacctcacacttcca
tgtcctcttttttttttcttttttttttacccttctatttttacattcaa
ctctcacactcccatgccgtgtatcttctcacagGCGTGCCCACGCGGCG
GATTCCGCTGATATAGGGAGAAGAGGAGCCTTAGAAGATTAAGACGGAAG
GAATGGGAAAGATAGAGGTAGAAAGACAGATAGATAGATAGATAGATACA
GTGATTGAGAGAGAGAGAGAGAGAAATAAATAGAGAGAGAAAAAAATATC
GAGAGAGGAAATGAGGAAACGAGGAAAGAAGGGGGCGAGAAAGAGTGTGC
GGAGAAATTGACCTTAGCTTAGCAAATTTTATTTTCGGAAAAAAAAAAAA
AAAAAAAAAGTGTCCACATACAGGTCATGACTTATGGTTTCGCTGTTGTC
TTTACGCTCCTCCCCTCTTTCCTATTTCCCAATAGTTACCCACTCGTGTT
TCCACCCTTCTGCCTTCTTTCCCTTCTCCGGGCTCTCGGTCTTTGCCGGA
CATGTGGCCTGACCGATCTACGGCGTTGTTTTCTCATAACGCCACGGGGC
TTTATCACCTTCCTCCTCTCCCTCCCATCTCGCTCTCTCTTCCCTCCACT
CCTCGTTGGACGCACACGTCGATGAACATCTCTCGTCGCAGGTAGATGTA
GTCTTCCACCATCCCCCTGGTCATGACACGGCACCTGTCGGGAAGGAGGA
AAAGACAAAGGGAAAGAGGGGACGATAAGGGAAGAAGGGGAGGGAAAGGA
AGTCGACGACGACTGGTTGTTGTATATCATACAGTCCTTTTTCATCACAT
ACGTCAAAATTGATAAGATAATAATTTCCTCCTTCCGCCCACTAAGCCAA
CGTTGCATAACACCAACTATAAAAGAAAAATGGTTGCCGGAAAATAAACA
CTCAAATGATCACTGAAGTATAGAAAGTACCTGTGCTCATGGATATTTTT
ATATGGAGGCTCGAACGCCGGATCCATATACCTCTCAATGTCGATGAAAA
AATAGCTTTTCTGCAACAGCCGCGTGAGTGCATAAGCCGTTGAGGCAAAG
ATGCCCGTTTCCATGATAACGTCCAGGAGGGTCCTCGCCTTTGCTTGTCG
GTATCGAAGGAGGAAAGGCGCATGGAAGGGAGGGTTGGAGTGACTGGTGG
TTGGTAAGGGACAGGGCCAGTAGGCGAAGCACATTTGCGTGGCGGAGCGA
CGAGAGGAGGAGGAAGTTTGAAGGAGTCGGTCGTAGGTGGCTTGGGCCCA
CAAAGCGAGAGAGGGAGAGAAAGGAGAGTCGGTGCCGGGGATGATGTAGC
AGGTTAGGTCGCTGTTCCCTCCTTTGAGAAGGAGATATAGACAGTAGAAG
AGGAGGGACGTCTCGAGAAAGAGGAAATAATAGGGGAATCGGCGAGTGGG
ATAAGAAGCAGGCGCGGTGGAGGAAGGGAGGTCTTCCCCCTTCTCCTCGT
CCTCCTGCTCTTCTATCTCCCTACCATCTTCCCATTCGAAAGTGCTGCTG
CTATGGTAACGGAAAAGGGCCCAGAAACGGGCATGGCCGTTAGCATCCGC
CGGAATTCCTCCCCGTTCTCCCCCTCCCTCCTCCGTCCCTCCTCCGTCAG
CAGCCGCAGGTGCCACTCCCATCCCTCCAAGACTTTTTCGTCTACCGGTC
TTATTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGC
back to top

protein sequence of NO28G01400.1

>NO28G01400.1-protein ID=NO28G01400.1-protein|Name=NO28G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MVGASQDLYDHEQQLQHQHQVQQQEQQQQLQQQQQQHDLSGISLPVTGAA
YIGRVGGGGAVGVGGGALPPPSAPPFLPTTPSFSFGASHSPPSSSFASPD
MSLPKTEGGATGMGRGLLPSSSSSSSSSATTFLTMPSPYFPLPAAPGEDE
RQDGGRSTRFSTRNCSSPSSLPPPSSFHTSSLPSSQAQPPPIPSSSFQSS
SSYPTLDDGAMLAMSLPPSLPPSFPQFSAIPSQQQQHLQQQHLQQQQLQQ
QQLQLLQQQQQLQQQQLIVQQQQQILQHQQQQLQRQYLILNPSYPGIRLV
HAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSST
CYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLD
TEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVF
FPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRIPLI*
back to top
Synonyms
Publications