NO28G01400, NO28G01400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01400 vs. NCBI_GenBank
Match: CBJ26831.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 289.3 bits (739), Expect = 2.300e-74 Identity = 133/204 (65.20%), Postives = 163/204 (79.90%), Query Frame = 0 Query: 294 YPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRIPLI 498 YPG+R + PP+Y++D+F S EC AL+A A +I +PVVGAG G++S SRTSS+C+LARED+P++ HK+ LTGKP EH+ELPQVGRY SQ+Y H+DAFDL+TEDGRRFA+NGGQRV TVL+YLN V SGGCT F L + + P +G+AVVFFPA+LDG LD R LHAAEPAID KWVSQ+WIRQG+Y G PT RIP I Sbjct: 91 YPGLRNLRETPPLYVVDDFFSGPECDALIALAGNYMIVSPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPTARIPAI 294
BLAST of NO28G01400 vs. NCBI_GenBank
Match: GAX27364.1 (hypothetical protein FisN_17Lh253 [Fistulifera solaris]) HSP 1 Score: 272.7 bits (696), Expect = 2.200e-69 Identity = 129/203 (63.55%), Postives = 157/203 (77.34%), Query Frame = 0 Query: 292 PSYPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRI 495 PSYPG+R+++ PP++ ++NFL+P EC L+ AA L APVVG G G++S SRTSSTCYLARED+ L+ K+ LLTGKP EH ELPQVGRY ++Y QHFDAFDL TEDGRRFA NGGQR TVLIYLN V+ GG T F LNL I P +G+A+VFFPA++DG LD ALHAA PAID K+VSQVWIRQ +Y G P++R+ Sbjct: 11 PSYPGLRVLNNSPPIFAVENFLTPYECDFLIHAAVDGLGPAPVVGKGAGEISPSRTSSTCYLAREDLGDLMRKVTLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSTYNGQPSKRL 213
BLAST of NO28G01400 vs. NCBI_GenBank
Match: GAX13312.1 (hypothetical protein FisN_17Hh253 [Fistulifera solaris]) HSP 1 Score: 271.9 bits (694), Expect = 3.800e-69 Identity = 129/203 (63.55%), Postives = 157/203 (77.34%), Query Frame = 0 Query: 292 PSYPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSYAGVPTRRI 495 PSYPG+R+++ PP++ ++NFL+P EC L+ AA +L APVVG G G++S SRTSSTCYLARED+ L+ K+ LLTGKP EH ELPQVGRY ++Y QHFDAFDL TEDGRRFA NGGQR TVLIYLN V+ GG T F LNL I P +G+A+VFFPA++DG LD ALHAA PAID K+VSQVWIRQ Y G P++R+ Sbjct: 11 PSYPGLRVLNNSPPIFAVENFLTPYECDFLIHAAVDALGPAPVVGKGAGEISPSRTSSTCYLAREDLGDLMRKVSLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPSKRL 213
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_002182153.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46054.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 253.1 bits (645), Expect = 1.800e-63 Identity = 119/188 (63.30%), Postives = 144/188 (76.60%), Query Frame = 0 Query: 299 LVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQGSY 487 +++ PPM+ +DNFL+P EC+ L+ A+ S APVVG G G++S SRTSSTCYL+RED+P L+ K+ LTGKP EH ELPQVGRY SQ+Y QH+DAFDL TEDG RFA NGGQR TVL+YLN V GG T F LNL + P QG+A+VFFPA++DG LD ALHAA PA+D K+VSQVWIRQG Y Sbjct: 1 VLNTSPPMFAVDNFLTPLECEFLIHMAQDSFGPAPVVGKGAGEVSPSRTSSTCYLSREDLPDLMRKVSSLTGKPIEHCELPQVGRYFPSQQYLQHYDAFDLGTEDGLRFAANGGQRTITVLLYLNDVARGGATRFPALNLDVQPRQGMALVFFPATIDGMLDRMALHAAMPAVDTKYVSQVWIRQGHY 188
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_009035958.1 (hypothetical protein AURANDRAFT_14928, partial [Aureococcus anophagefferens] >EGB09933.1 hypothetical protein AURANDRAFT_14928, partial [Aureococcus anophagefferens]) HSP 1 Score: 248.1 bits (632), Expect = 5.900e-62 Identity = 116/180 (64.44%), Postives = 140/180 (77.78%), Query Frame = 0 Query: 304 PPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQ 484 PP+Y + NFL+ EEC AL+ +AK + APVVG GNG++S SRTSSTCYLARED+PS+ K+C LTGKP EH+ELPQVGRY + YK H+DAFD + DGRRFA+NGGQRVATVL+YLN V GG T F L + I P +G A++FFPA+LDG LD LHAAEPA+D KWVSQ+WIRQ Sbjct: 1 PPIYTVQNFLTEEECDALIDSAKDHMTPAPVVGPGNGEVSVSRTSSTCYLAREDLPSVCTKVCALTGKPLEHLELPQVGRYRGGEFYKPHYDAFDTSSADGRRFAQNGGQRVATVLVYLNDVERGGETSFSKLGVRIKPRKGNALIFFPATLDGVLDQNYLHAAEPAVDPKWVSQIWIRQ 180
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_002291983.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED90834.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 222.2 bits (565), Expect = 3.500e-54 Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 0 Query: 304 PPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAI 472 PP++ ++NFL+P EC L+ A+ +L APVVG G G++S SRTSSTCYLARED+P L K+ +LTGKP EH ELPQVGRYL SQ+Y QHFDAFDL EDGRRFA NGGQR TVL YLN V GG T F LN+ + P +G+AVVFFP++LDG LD ALHAA PA+ Sbjct: 1 PPVFSVENFLTPAECDFLIHASNDALGPAPVVGKGAGEVSPSRTSSTCYLAREDLPEYLRKVGVLTGKPAEHCELPQVGRYLPSQQYLQHFDAFDLSNEDGRRFAANGGQRTITVLTYLNDVPRGGATSFPNLNIQVQPRRGMAVVFFPSTLDGLLDKMALHAAMPAV 168
BLAST of NO28G01400 vs. NCBI_GenBank
Match: KOO22018.1 (prolyl 4-hydroxylase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 214.9 bits (546), Expect = 5.600e-52 Identity = 108/206 (52.43%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 294 YPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLARE--DVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQG-SYAGVPTRRIPL 497 YPG++ VH PP+YL+++FL+ EECQAL+ A L R+ A + + RTS TC+LA+ P LL KI LT KP H+ELPQV RY +SQ Y +H+D D TE GR F GGQRVATVL+YLN V GGCTHF+ L+LSI P +G A++FFP L+G LD ALHA PA+D KWVSQVWIR+ G P+ +P+ Sbjct: 92 YPGLKRVHDSPPVYLVEDFLTDEECQALIETAGPLLQRSKTHAAAGSEATKGRTSLTCHLAKHVYPCPILLKKIHNLTNKPYGHMELPQVARYASSQRYVEHYDGVDPHTEAGRSFCAAGGQRVATVLVYLNEVSEGGCTHFKRLDLSIKPDKGTALIFFPGFLNGELDTDALHAGMPAVDTKWVSQVWIRKAFREDGQPSSPVPI 297
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_005774320.1 (hypothetical protein EMIHUDRAFT_424641 [Emiliania huxleyi CCMP1516] >XP_005791598.1 hypothetical protein EMIHUDRAFT_423042 [Emiliania huxleyi CCMP1516] >EOD21891.1 hypothetical protein EMIHUDRAFT_424641 [Emiliania huxleyi CCMP1516] >EOD39169.1 hypothetical protein EMIHUDRAFT_423042 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45 Identity = 96/194 (49.48%), Postives = 126/194 (64.95%), Query Frame = 0 Query: 292 PSYPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAR--EDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQ 484 P +PG+R ++ +PP+Y+ D+FLS +EC ALM A L R+ + + RTS TC+L++ + P+LL KI LTGKP +H+ELPQV RY Q Y +H+D D T G+ F +GGQR+ TVL+YLN GG T FR LNL I P +G+AV+FFP L+G LD ALHA P + KWVSQVWIRQ Sbjct: 76 PDHPGLRRINERPPIYVCDDFLSDDECAALMQVATPLLQRSKTHAVAGSEATRGRTSLTCHLSKKADPCPALLSKIQALTGKPFDHMELPQVARYTEGQRYVEHYDGVDPHTTAGKAFCASGGQRIGTVLMYLNVPEGGGGTFFRRLNLEIKPKKGMAVIFFPGFLNGELDLDALHAGLPPVGTKWVSQVWIRQ 269
BLAST of NO28G01400 vs. NCBI_GenBank
Match: XP_005791597.1 (hypothetical protein EMIHUDRAFT_439880 [Emiliania huxleyi CCMP1516] >EOD39168.1 hypothetical protein EMIHUDRAFT_439880 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 193.0 bits (489), Expect = 2.300e-45 Identity = 96/192 (50.00%), Postives = 124/192 (64.58%), Query Frame = 0 Query: 294 YPGIRLVHAQPPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAR--EDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVSGGCTHFRCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAIDEKWVSQVWIRQ 484 YPG++ +H QPP+Y+ +FLS +EC ALM A L R+ + + RTS TC+L++ + P+LL KI LTGKP +H+ELPQV RY Q Y +H+D D T G+ F +GGQR+ TVL+YLN GG T FR LNL I P +G+AV+FFP L+G LD ALHA P + KWVSQVWIRQ Sbjct: 34 YPGLKRIHEQPPIYVCHDFLSDDECAALMQVATPLLQRSKTHAVAGSEATRGRTSLTCHLSKKADPCPALLSKIQALTGKPFDHMELPQVARYTEGQRYVEHYDGVDPHTTAGKAFCASGGQRIGTVLMYLNVPEGGGGTFFRRLNLEIKPKKGMAVIFFPGFLNGELDLDALHAGLPPVGTKWVSQVWIRQ 225
BLAST of NO28G01400 vs. NCBI_GenBank
Match: OEU08314.1 (hypothetical protein FRACYDRAFT_153725, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 193.0 bits (489), Expect = 2.300e-45 Identity = 98/172 (56.98%), Postives = 122/172 (70.93%), Query Frame = 0 Query: 304 PPMYLIDNFLSPEECQALMAAAKGSLIRAPVVGAGNGQLSGSRTSSTCYLAREDVPSLLHKICLLTGKPQEHIELPQVGRYLASQEYKQHFDAFDLDTEDGRRFAENGGQRVATVLIYLNHVVS---GGCTHF-RCLNLSITPTQGLAVVFFPASLDGCLDDRALHAAEPAI 472 PP+Y++D FL+ +E Q L+ AA S APVVG G+G +S +RTSSTCYLARED+P L K+ LT P H+ELPQVGRY SQ+Y H+DAFD + DG RFA NGGQR TVLIYLN V + GG T F + N++I P +G A++FFPA++DG LD R LHAA PAI Sbjct: 1 PPIYIVDQFLNDDETQFLIDAASDSFTPAPVVGVGSGVISDTRTSSTCYLAREDLPDLARKVSALTQTPITHLELPQVGRYYTSQQYLPHYDAFDTEEVDGARFASNGGQRTVTVLIYLNTVTTNTGGGHTVFPKLQNVNIQPIRGQALIFFPATIDGHLDPRTLHAALPAI 172 The following BLAST results are available for this feature:
BLAST of NO28G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01400 ID=NO28G01400|Name=NO28G01400|organism=Nannochloropsis oceanica|type=gene|length=4336bpback to top protein sequence of NO28G01400.1 >NO28G01400.1-protein ID=NO28G01400.1-protein|Name=NO28G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bpback to top Synonyms
Publications
|