NO28G00990, NO28G00990 (gene) Nannochloropsis oceanica

Overview
NameNO28G00990
Unique NameNO28G00990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2404
Alignment locationchr28:317871..320274 -

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Properties
Property NameValue
Description2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:317871..320274 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016868intramolecular transferase activity, phosphotransferases
GO:0004619phosphoglycerate mutase activity
GO:0016868intramolecular transferase activity, phosphotransferases
GO:0004619phosphoglycerate mutase activity
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO:0006096glycolytic process
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
IPR005952Phosphogly_mut1
IPR013078His_Pase_superF_clade-1
Homology
BLAST of NO28G00990 vs. NCBI_GenBank
Match: CBN76135.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 295.8 bits (756), Expect = 2.300e-76
Identity = 142/278 (51.08%), Postives = 192/278 (69.06%), Query Frame = 0
Query:   92 TAAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQAEPAPFLTGQFLISAE-------NVAAVKERDSRQVYDLRITSNLEK 363
            T AYEV+FVRHGQSTWN+ NRFIGWTD  LTE+G  EAR AG++L  +  + D ++TS+LKR IKTAW +L EL Q++ PV   W LNER YG+LVG EKK  V   G E V+ WRRS+D+ PPP     K WPG + +YK L+  G   ++P  E LKDV  R++A+W+EV+ PAI++GKRV V GHENNLR+L  +ID ++  D++HVE+PRA PL Y  D  ++P+R A  A  L+G ++   E        +AA++ERD + VYDL +++NLE+
Sbjct:   19 THAYEVVFVRHGQSTWNKANRFIGWTDAELTEEGEIEARVAGQLLLSQEFEFDVIYTSMLKRAIKTAWVVLDELNQQHVPVTTDWHLNERCYGALVGREKKECVRSFGAEQVKIWRRSWDIPPPPIDKSSKLWPGNNPRYKFLMQDGE-SQVPLHESLKDVMSRSSAYWDEVIAPAIRSGKRVCVCGHENNLRSLLKYIDGISNADIMHVELPRAVPLVYHLDEDLRPMRLANSAEHLSGGYVGDPEEDGTPHPKIAAIQERDRKNVYDLSVSTNLEE 295          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: GAX29422.1 (hypothetical protein FisN_16Hh137 [Fistulifera solaris])

HSP 1 Score: 295.0 bits (754), Expect = 3.900e-76
Identity = 149/301 (49.50%), Postives = 206/301 (68.44%), Query Frame = 0
Query:   67 SSPQSPFTADFAQQASLPS-PSPTPATAAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQA-----EPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLE 362
            S PQ+P      Q+AS  S    TP    Y++ F+RHGQSTWNRDNRFIGWTD PLT+ G+ EAR AG+++   G++ DEVHTSLL+R I+TA   L ELGQEY PV+ HWRLNERSYG LVG  KK  V++ GV+ V+ WRRS+D  PPP   D  Y+PGKD +Y+++L S     IP +E L D  +R++ +W+EV+ P+++ GK V++VGHENNLR+L M ++ +  ED++++ +PRA PL Y+ D  +KPV +      E   +L G++L   + V  + +RD +QVYD RIT+NLE
Sbjct:   11 SLPQAPVAR--GQKASFTSLNQDTP----YQLCFLRHGQSTWNRDNRFIGWTDTPLTDDGVLEARVAGQMMFNAGIRFDEVHTSLLRRTIRTANLALMELGQEYLPVYKHWRLNERSYGDLVGKNKKEVVSQFGVDQVKRWRRSYDEPPPPMTRDHPYYPGKDPRYREMLNS-----IPESESLHDTMKRSSVYWDEVIAPSLRDGKTVLIVGHENNLRSLIMRLEDIGKEDIINLCLPRAVPLAYRLDENLKPVARQDGKLDEATGYLRGEWLGGDKAVRDILQRDRQQVYDTRITTNLE 300          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: GAX26301.1 (hypothetical protein FisN_16Lh137 [Fistulifera solaris])

HSP 1 Score: 294.7 bits (753), Expect = 5.100e-76
Identity = 138/272 (50.74%), Postives = 193/272 (70.96%), Query Frame = 0
Query:   95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQA-----EPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLE 362
            Y++ F+RHGQSTWNRDNRFIGWTD PLT+ G+ EAR AG+++   G++ DEVHTSLL+R I+TA   L ELGQEY PV+ HWRLNERSYG LVG  KK  V++ GV+ V+ WRRS+D  PPP   D  Y+PGKD +Y+++L S     IP +E L D  +R++ +W+EV+ P+++ GK V++VGHENNLR+L M ++ +  ED++++ +PRA PL Y+ D  +KPV +      E   +L G++L   + V  + +RD +QVYD  IT+NLE
Sbjct:   33 YQLCFLRHGQSTWNRDNRFIGWTDTPLTDDGVLEARVAGQMMFNAGIRFDEVHTSLLRRTIRTANLALMELGQEYLPVYKHWRLNERSYGDLVGKNKKEVVSQFGVDQVKRWRRSYDEPPPPMTRDHPYYPGKDPRYREMLNS-----IPESESLHDTMKRSSVYWDEVIAPSLRDGKTVLIVGHENNLRSLIMRLEDIGKEDIINLCLPRAVPLAYRLDENLKPVARKDGKLDEATGYLRGEWLGGDKAVRDILQRDRQQVYDTSITTNLE 299          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: XP_002178324.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49989.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 288.1 bits (736), Expect = 4.800e-74
Identity = 157/374 (41.98%), Postives = 225/374 (60.16%), Query Frame = 0
Query:    1 MSSVLLRTSVSTTALRASGFPSDCVGSLSPQALLAQPELNSRTTLAFSTRHHQPQQQTPIPLGSSPSSPQSPFTADFAQQASLPSPSPTPATAAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPV-----RQAEPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLEKGSGSRRW 370
            +SS     +V  T  R  G   + V + +    +   + N RT    +T+ +    +T    G   + P+  FT       SL   +P      +++ F+RHGQSTWNRDN FIGWTD PLT+ G+ EAR AG++L + G++ DEVHTSLL+R I+T    L ELGQEY PVH HWRLNER YG LVG  KK  V +HG + V+ WRRS+D  PPP   D  Y P +D +Y+ +     L  +P +E LK+  ER++ +W+EV+ PA++ GK ++VVGHENNLR+L M ++ +APED++++ +PRA PL Y+ D  +KP+     +  E   FL G +L   + V+ + +RD +QVYD  IT+NLE G    +W
Sbjct:   22 LSSRSFGATVDATHARMGGNFVNSVQACNNGKRVCWHQRNRRTFSVVATQRNGIGHRT--TQGEMEAVPRRHFT-------SLNQSTP------FQLCFLRHGQSTWNRDNIFIGWTDTPLTDDGVLEARVAGKMLHKSGIRFDEVHTSLLRRSIRTTNLALMELGQEYLPVHKHWRLNERCYGDLVGKNKKEVVMQHGADQVKRWRRSYDEPPPPMSDDHPYHPARDPRYQNI-----LDELPKSESLKNTVERSSLYWDEVLAPALREGKTLLVVGHENNLRSLLMRLEDIAPEDIINLSLPRAVPLAYRLDENLKPLPREDGKLDEATGFLKGTWLGGDQAVSEILDRDHKQVYDTAITTNLEIGQDREKW 375          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: XP_002289894.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93431.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 261.2 bits (666), Expect = 6.300e-66
Identity = 119/226 (52.65%), Postives = 160/226 (70.80%), Query Frame = 0
Query:   95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPV 321
            Y + FVRHGQSTWNRDNRFIGWTD PLTE G+ EAR AGR+L   G+  DE HTSLL+R I+T   +L E+GQEY PV  HWRLNERSYG LVGL KK  V + G E V  WRRS+D  PPP   D  + P +D +Y+ +     L  IP++E LK  K R+  +W++V+ P++++GK V++VGHENNLR+L M ++ + P+D++++ +PRA PL Y+ D  +KP+
Sbjct:    1 YNLCFVRHGQSTWNRDNRFIGWTDTPLTEDGVLEARVAGRMLRSSGMLFDEAHTSLLRRSIRTTNLVLMEMGQEYIPVQKHWRLNERSYGDLVGLNKKEIVKKFGKEQVLRWRRSYDEPPPPMNEDHDHHPKRDPRYRLM-----LDEIPSSESLKCTKARSKIYWDDVIAPSLRSGKTVLIVGHENNLRSLIMRLEGILPDDIINLNLPRAVPLAYRLDKDLKPL 221          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: EJK45011.1 (hypothetical protein THAOC_36404 [Thalassiosira oceanica])

HSP 1 Score: 255.8 bits (652), Expect = 2.600e-64
Identity = 132/308 (42.86%), Postives = 186/308 (60.39%), Query Frame = 0
Query:   95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEY-----------------------TPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQA-----EPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLEKGSGS---RRWVE 372
            Y V+FVRHGQSTWNRDNRFIGWTD PLT++G+ EAR AGR+L+  G+  D+ HTSLL+R I+T   +L E+GQEY                        PV  HWRLNERSYG LVG  KK  V + G + V+ WRRS+D          ++ P +D +Y+ +L       IP +E LK  + R   +W++V+ PA+++GK +++VGHENNLR++ M ++ ++  D++++ +PRA PL Y+ D  +KP+ +      E    L+G +L   ++V  V ERD  QVYD+ I  NLEK S     RRW E
Sbjct:   26 YNVVFVRHGQSTWNRDNRFIGWTDTPLTDEGVLEARLAGRMLSSSGILFDKAHTSLLRRSIRTTNLVLMEMGQEYIPGLLSDEAIDWFEQTLTLAPPWRPVSKHWRLNERSYGDLVGKNKKEVVKQFGQDQVKIWRRSYDQPXXXXXXXHEHHPKRDARYRLMLDD-----IPKSESLKCTRNRTKIYWDDVLAPALRSGKTLLIVGHENNLRSIIMRLEGISETDIINLSLPRAIPLAYRLDKDLKPLTRTDGGKDEATGMLSGYWLGGDDSVREVLERDHAQVYDVSIERNLEKDSDRDKWRRWTE 328          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: XP_001747083.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88007.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 248.1 bits (632), Expect = 5.500e-62
Identity = 123/258 (47.67%), Postives = 165/258 (63.95%), Query Frame = 0
Query:   93 AAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQAEPAPFLTGQFLISAENVAAVKERDSRQ 351
            A Y+V+FVRHGQS WN +N+F GW DVPL+EQG+ EA+EAG VL  +G K DE  TS+LKR IKT   IL E  QE+ PV   +RLNER YG+L GL+KK TV +HG E V  WRRS+D+ PP    D  Y P K        AS    ++PA E LK   ER   +W+EV+VP IKAGK+V++  H N++RA+  ++D ++ E +  +++P   PL Y+FD  MKP++Q   A  L+G++LI  E + A  E    Q
Sbjct:    2 AKYQVVFVRHGQSQWNLENKFTGWVDVPLSEQGVIEAKEAGAVLKEQGFKFDEAFTSVLKRAIKTCNIILEESDQEFIPVVKDYRLNERMYGALAGLDKKETVEKHGAEQVHIWRRSYDIPPPACEKDHPYHPSK----SPWAASIPEDKLPATESLKLTLERVLPYWDEVIVPEIKAGKKVLIAAHGNSIRAILKYLDDISEEVIPALDVPTGVPLFYEFDENMKPIKQEGAAEHLSGRYLIDEETLKAKIEEVKNQ 255          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: SMB24026.1 (phosphoglyceromutase 1 [Sterolibacterium denitrificans])

HSP 1 Score: 241.9 bits (616), Expect = 4.000e-60
Identity = 112/227 (49.34%), Postives = 152/227 (66.96%), Query Frame = 0
Query:   95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVR 322
            ++++ +RHG+S WN++NRF GWTDV LTE+GL EA  AGR+L +EG   D  +TS+LKR IKT WT+L E+ + + PVH  WRLNER YG+L GL K  T ARHG E V  WRR++D+ PPP   DD      + +Y   LA+G LPR    ECLKD  ER   +W E + P +K+GK V++  H N+LRAL  ++D V+  D++ + IP A PL Y+ DA +KP+R
Sbjct:    2 HKIVLIRHGESIWNKENRFTGWTDVDLTEKGLAEASAAGRLLKQEGFAFDIAYTSVLKRAIKTLWTVLEEMDRMWIPVHHSWRLNERHYGALQGLNKAETAARHGEEQVLVWRRAYDIPPPPLDADDPRMEAGNPRYAD-LAAGELPR---TECLKDTVERFLPYWHETIAPTVKSGKNVIIAAHGNSLRALIKYLDDVSDADIVGLNIPTAQPLVYELDADLKPIR 224          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: KPJ78611.1 (phosphoglyceromutase [Deltaproteobacteria bacterium SG8_13])

HSP 1 Score: 239.2 bits (609), Expect = 2.600e-59
Identity = 109/226 (48.23%), Postives = 155/226 (68.58%), Query Frame = 0
Query:   96 EVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVR 322
            +++ +RHG+S WN++NRF GWTDV LT +G++EA EAGR L  EG + D  +TS+LKR IKT W +L E+   + PV+ +WRLNER YG+L GL+K  T ARHG++ V  WRRS+DVRPP    DD+ +P KD +Y  LL      ++P  ECL+D  ER   +W+EVV PA++ G RV++V H N+LRAL  ++D V+ E++L + IP   PL Y+    ++P+R
Sbjct:    3 KLVLLRHGESVWNKENRFTGWTDVELTPKGVQEAIEAGRTLRNEGYRFDAAYTSVLKRAIKTLWLVLEEMELMWIPVYRNWRLNERHYGALQGLDKAETAARHGMDQVHIWRRSYDVRPPALTADDERYPAKDPRYADLLPG----QVPLTECLQDTVERFLPYWQEVVEPAVRKGTRVLMVAHGNSLRALVKYLDGVSDEEILGINIPTGIPLVYELADDLRPIR 224          
BLAST of NO28G00990 vs. NCBI_GenBank
Match: WP_028321323.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Desulfatiglans anilini])

HSP 1 Score: 238.8 bits (608), Expect = 3.300e-59
Identity = 105/226 (46.46%), Postives = 151/226 (66.81%), Query Frame = 0
Query:   95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPV 321
            Y ++ +RHG+S WN++NRF GW DV L+E+G+EEA EAGR+L REG   D  +TS+LKR I+T W  L E+   + P+  +WRLNER YG+L GL K  T  RHG E V  WRR++D+ PPP  +DD  +PG D +Y+ +       ++P +ECLKD   R   +W +V+VP I+ GKRV++  H N+LRAL  ++D ++ +D++ + IP   PL Y+ D QMKP+
Sbjct:    2 YTIVLLRHGESLWNKENRFTGWVDVDLSEKGMEEAHEAGRILHREGFSFDFAYTSVLKRAIRTLWITLDEMDLMWIPIRQNWRLNERHYGALQGLNKAETAERHGEEQVLIWRRAYDIAPPPLSLDDPMYPGSDPRYRDV----DTAKLPLSECLKDTVNRFIPYWSDVIVPTIREGKRVIIAAHGNSLRALVKYLDNISEKDIVGMNIPTGIPLVYKLDRQMKPL 223          
The following BLAST results are available for this feature:
BLAST of NO28G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN76135.12.300e-7651.08conserved unknown protein [Ectocarpus siliculosus][more]
GAX29422.13.900e-7649.50hypothetical protein FisN_16Hh137 [Fistulifera sol... [more]
GAX26301.15.100e-7650.74hypothetical protein FisN_16Lh137 [Fistulifera sol... [more]
XP_002178324.14.800e-7441.98predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002289894.16.300e-6652.65predicted protein, partial [Thalassiosira pseudona... [more]
EJK45011.12.600e-6442.86hypothetical protein THAOC_36404 [Thalassiosira oc... [more]
XP_001747083.15.500e-6247.67hypothetical protein [Monosiga brevicollis MX1] >E... [more]
SMB24026.14.000e-6049.34phosphoglyceromutase 1 [Sterolibacterium denitrifi... [more]
KPJ78611.12.600e-5948.23phosphoglyceromutase [Deltaproteobacteria bacteriu... [more]
WP_028321323.13.300e-5946.462,3-diphosphoglycerate-dependent phosphoglycerate ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00990.1NO28G00990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560365gene_9201Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00990.1NO28G00990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00990 ID=NO28G00990|Name=NO28G00990|organism=Nannochloropsis oceanica|type=gene|length=2404bp
TAAGATCAAGGAACAAAGTGCCTACACACTTTTCCAACATTCGACAATAC
AAAATACAGTCAGAACGCCTTCATGCACGTATGAGTAGCGTCCTTCTTCG
CACCAGCGTAAGCACCACCGCCTTGCGAGCCTCTGGTTTCCCCTCCGATT
GCGTCGGATCACTTTCCCCCCAAGCACTGCTTGCACAACCAGAACTCAAC
TCAAGGACAACACTGGCGTTTTCCACGCGACACCACCAGCCCCAGCAGCA
AACCCCCATACCCTTGGGATCATCGCCCTCTTCTCCCCAGTCCCCTTTCA
CTGCTGATTTCGCTCAGCAGGCCTCCCTCCCGTCTCCCTCCCCTACCCCG
GCTACTGCTGCATACGAGGTCCTCTTTGTGCGTCACGGGCAGTCAACGTG
GAATCGGGACAATAGGTTCATTGGTTGGACCGATGTGCCGTTGACAGAAC
AAGGATTAGAGGAAGCAAGGGAGGCAGGGCGAGTGCTGGCCCGGGAGGGA
GTGAAAGTCGACGAGgtaagttctgtttacaaagagggcgggatggaagg
ggtattaattctggagcaatttgagccggagtagtcggagggcccaaggg
cttgaaggtacacgatggccaccatggcttacgttcatttgggaaaaaaa
tacgatcgtgatacagacaaccacaaactcgcccttcttactcattccct
ctctcccccccctccgcagGTTCACACGAGCCTCCTCAAGCGCTGCATCA
AAACGGCCTGGACTATCCTCCGTGAACTGGGACAAGAGTACACTCCCGTG
CACTGCCACTGGCGGCTGAACGAACGCAGCTATGGGTCCTTGGTTGGGCT
GGAAAAGAAATCTACAGTTGCTAGGCACGGCGTGGAGACAGTGAGGACCT
GGCGCAGATCTTTCGATGTCCGTCCCCCGCCTCAACGTATGGACGATAAA
TACTGGCCCGGAAAGGACAAGAAATATAAGAAATTGCTTGCGAGTGGGAC
ACTTCCACGAATTCCCGCGGCAGAGTGCTTGAAGGACGTGAAGGAGCGTG
CTGCGGCCCATTGGGAGGAGGTGGTGGTGCCGGCCATCAAGGCCGGGAAG
CGTGTCGTTGTCGTTGGGCACGAAAATAATTTAAGGGCATTGTTTATGCA
CATTGACCAGGTCGCACCAGAAGATATGCTGCACGTGGAGATTCCTCGAG
CGGCACCCTTGAGGTATCAATTCGgtatgtcctcccaaaaaagataaatt
gagttcatggttggtggagcctccttcgctcccattcacgtgctcctccc
tccctcccttcctcccatcttttctttttctgtcatcattatattcctct
tacgtctctcttccccctccttcctgtcctttccccctccctcctttacc
agACGCCCAGATGAAGCCCGTGAGGCAGGCGGAGCCCGCCCCCTTCCTAA
CGGGACAGTTCCTGATATCGGCGGAGAACGTTGCGGCGGTCAAAGAGAGG
GATTCAAGACAAGTGTATGATCTAAGAATTACCTCTAACTTGGAAAAAGG
GAGTGGCAGTCGGAGGTGGGTGGAGGAACAGCCGCAGCAGGCGAAGAAGG
AGGAGCAAGAGGAGCAGGTGCGGAGGGGGCAGCAGCTGCGACTGAATCGG
ACGGGCTTGAGCATCAATGCTCTGAGAGGTATCAAGGCGTCTTGGATTTC
CTTGCCGGACGAGCGCGGCACTACTGGTGCTTCTCCAGATTCCCCAGCTG
CTGCTGCTGGTACTTCGGGAGGGTCGCCCGAGACGATGAAAAGAGTGCTG
AGATTGTTCGATCCCGATCAGAACCTGTGGCGCTTTACCTATCCCTCCCT
TTGAAGAGGCAAATGGATGGAGCGAAGGCAAGAAGAGGGGTACGAAAAAG
AACAGCAGTAGAAATATTATGTAGAAGAGAAGGAGCACATTAGTGCATGA
AGGGGTGATGTATGTTGTTGTGTATATGTCAAAAATCGACATCGAGAAAG
TGTAGTTGCCGGTCAACAATGAGATGGAAAGATTGAATATGCAGACATGT
AGGGCATGACTTAGAAAGGAGGTGCAACACAATAGCAGCCTGCAGCAACA
GCTGCAGCAAGAGCAACGATTGAATATGCAGACATGTAGGGCATGACTTA
GAAAGGAGGTGCAACACAATAGCAGCCTGCAGCTACAGCTGCAGCAAGAG
CAACTGAAAAATGTCGACTCAAACGACAGCAGAGGTAATTAACGAGGAAC
AGAGAGAGCGGGGGGGCCTTGGGGTCGAGGTTCAGGCACCTGCTTCACCA
GCGACCAATACAGAAAATGGAATAACGGAGTCACTCCGAGCTGTGATGAT
AATGACGACGCGCGACAAAAAAACAAAAAAACAAATGAGCATTAAAGTAA
AAAG
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protein sequence of NO28G00990.1

>NO28G00990.1-protein ID=NO28G00990.1-protein|Name=NO28G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MSSVLLRTSVSTTALRASGFPSDCVGSLSPQALLAQPELNSRTTLAFSTR
HHQPQQQTPIPLGSSPSSPQSPFTADFAQQASLPSPSPTPATAAYEVLFV
RHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSL
LKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGV
ETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLK
DVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLH
VEIPRAAPLRYQFDAQMKPVRQAEPAPFLTGQFLISAENVAAVKERDSRQ
VYDLRITSNLEKGSGSRRWVEEQPQQAKKEEQEEQVRRGQQLRLNRTGLS
INALRGIKASWISLPDERGTTGASPDSPAAAAGTSGGSPETMKRVLRLFD
PDQNLWRFTYPSL*
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Synonyms
Publications