NO28G00960, NO28G00960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00960 vs. NCBI_GenBank
Match: EWM20900.1 (Aminotransferase, class IV [Nannochloropsis gaditana]) HSP 1 Score: 363.6 bits (932), Expect = 5.800e-97 Identity = 189/287 (65.85%), Postives = 217/287 (75.61%), Query Frame = 0 Query: 27 HPAFVLSPLPHAHPHT----------------TSGRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGIVRGVEYTHITLDELLSATEAYSLGGGSVLPIVRINGKNIGGGKPGPVFKELDDLLLCDMKTNYLDAVPYHHYAPGGWLKRGLRALKERWRRTDGYLMATVLLALPFTFFLGKIRGGPTFVL 298 HPAF L H T TSGRG+F++S+KETT SGFFVMVHRY SK +LKLQGI E+V++DIPLKN LLA++KSTNYL NALVC++AE GG LGIQ + SG LAESSI N+AILT G+LRTPPFE++LAGTTVKRLWELA + L PQGIV GVEY ITL ELLSA EA+SLGGGSVLPIVRI+G IG GKPGPVFKELD LL+ DM N+LD VPY Y GG ++RG R L +RWRR DGYLM VL+ALP F +GKIRGGPTF+L Sbjct: 107 HPAFTKEELRHIILSTVAASQVRDDIFVRFWMTSGRGNFAISAKETTSSGFFVMVHRYPSKGDLKLQGITEHVVEDIPLKNPLLATMKSTNYLINALVCQAAEDKGGFLGIQFEPSGALAESSIGNVAILTQEGVLRTPPFERILAGTTVKRLWELAVDSLLPQGIVSGVEYHQITLAELLSAKEAFSLGGGSVLPIVRIDGHVIGDGKPGPVFKELDALLVRDMDVNFLDPVPYQEYTQGGLVQRGWRGL-QRWRRADGYLMGLVLIALPLAFAVGKIRGGPTFML 392
BLAST of NO28G00960 vs. NCBI_GenBank
Match: KOO22669.1 (branched-chain-amino-acid aminotransferase-like protein chloroplastic-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 148.3 bits (373), Expect = 3.800e-32 Identity = 87/206 (42.23%), Postives = 123/206 (59.71%), Query Frame = 0 Query: 43 TSGRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGIVRGVEYTHITLDELLSATEAYSLGGGSVLPIVRINGKNIGGGKPGPVFKELDDLLLCDMKTNYL-DAVPYHH 248 ++GRGDFS+S K G F+ +VH + +G+ V+ +PLK LLA++KS NY+ NALV AE G +GIQ+ E GRLAESS+A + ++ +G LRTPP + +L TT R LA L G+++G + I+ E+ A E S GGG V PIV+++G+ +G G+PGPV+ LD LL D L D VPY + Sbjct: 141 SAGRGDFSISPKRCVGPTFYCVVHE-DTHSAAGERGMSA-VMVTVPLKPPLLATMKSNNYMLNALVALEAEAAGASMGIQLHEDGRLAESSVATVGVVDRYGWLRTPPPDAILNSTTWARATALA-PNLVGSGVIQGCKVGPISRAEIEEARELLSFGGGWVEPIVKLDGRLVGSGRPGPVWLALDRLLREDFGNPELTDEVPYEN 343
BLAST of NO28G00960 vs. NCBI_GenBank
Match: OGP97264.1 (hypothetical protein A2Z39_04995 [Deltaproteobacteria bacterium RBG_19FT_COMBO_46_9]) HSP 1 Score: 131.7 bits (330), Expect = 3.700e-27 Identity = 75/195 (38.46%), Postives = 107/195 (54.87%), Query Frame = 0 Query: 45 GRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGIVRGVEYTHITLDELLSATEAYSLGGG-SVLPIVRINGKNIGGGKPGPVFKELDDLLLCDMKTN 239 G G +S + E S ++ V RY EE + VI +P+K A+IKS NYL N L+ A G + +D+SG L E S NI I++ ++ P FE LAGTT KR+ ELA +RL I++GV + I+ +++ + E +G ++LP+V NGK IG G PGPV+ +L DLL DM N Sbjct: 125 GPGGYSTNPFECPSSQLYINVIRYHELEEKDHREGVSVVISKVPIKESFFATIKSCNYLQNVLMKMEAINAGYKYSVNIDDSGFLGEGSTENIGIVSEDNHVKIPSFEHTLAGTTAKRVMELA-DRLVKDRIIKGVGFARISPEDVYRSREVVLMGTSINILPVVNFNGKTIGNGSPGPVYSKLSDLLWKDMHEN 318
BLAST of NO28G00960 vs. NCBI_GenBank
Match: OGQ73998.1 (hypothetical protein A3G40_11705 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22]) HSP 1 Score: 131.7 bits (330), Expect = 3.700e-27 Identity = 82/207 (39.61%), Postives = 121/207 (58.45%), Query Frame = 0 Query: 43 TSGRGDFSVSSKETTGSGFFVMVHRYKS-KEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGIVRGVEYTHITLDELLSATEAYSLGGG-SVLPIVRINGKNIGGGKPGPVFKELDDLLLCDMKT--NYLDAVPY 246 ++G G F +S E GS F+V+V ++ +QG+ + V +P+K A +KSTNYL N LV A+ G G+ VDE G +AESS N+A +T +LR PPF+ +L+G TV+R+ LA RL +G +R + I ++E +A E +G V P+V +GK IG G+PGP+ K+L DL D++T + L AVPY Sbjct: 125 SAGPGGFGLSPSECVGSSFYVVVFGGEAYPASYYMQGV-KVVTSTVPIKPPFFARVKSTNYLPNVLVVLEAKDRGADNGVFVDERGMIAESSNMNVAFVTRDRVLRHPPFDAILSGITVQRMLHLA-RRLVERGELREIRIGEIPVEEGQAAAEILLIGSSIKVAPVVAWDGKPIGDGRPGPIAKKLLDLWYEDVRTASDQLVAVPY 329
BLAST of NO28G00960 vs. NCBI_GenBank
Match: OGQ78408.1 (hypothetical protein A3F90_04660 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19]) HSP 1 Score: 127.5 bits (319), Expect = 7.000e-26 Identity = 77/207 (37.20%), Postives = 118/207 (57.00%), Query Frame = 0 Query: 43 TSGRGDFSVSSKETTGSGFFVMVHRYK-SKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGIVRGVEYTHITLDELLSATEAYSLGGG-SVLPIVRINGKNIGGGKPGPVFKELDDLLLCDMK--TNYLDAVPY 246 ++G G F ++ E GS F+V+V + + QG+ + V +P+K A +KSTNYL N LV A+ G GI +DE G +AE S N+A +T G+LR P F+ +L+G TV+R+ +LA RL QG +R + + ++E +A E G + P+V +G+ +G GKPGP+ K+L DL D++ T+ L VPY Sbjct: 125 SAGPGGFGLAPGECVGSSFYVIVFNAELYPDSYYTQGL-KVVTSSVPIKPPFFARVKSTNYLPNVLVVLEAKDRGADNGIFIDERGMVAEGSNMNVAFVTRDGVLRHPRFDSILSGLTVQRVLQLA-RRLVEQGDLRDIRIADVPVEEARAAAEMMLTGSSIKIAPVVEWDGRPVGDGKPGPIAKKLLDLWREDVRQATDQLIPVPY 329
BLAST of NO28G00960 vs. NCBI_GenBank
Match: CBJ48407.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.6 bits (314), Expect = 2.700e-25 Identity = 81/241 (33.61%), Postives = 127/241 (52.70%), Query Frame = 0 Query: 43 TSGRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFE-KVLAGTTVKRLWELAEERL--------KP------QGIVRGVEYTHITLDELLSATEAYSLGGGSVLPIVRINGKNIG-------------------GGKPGPVFKELDDLLLCDMK-TNYLDAVPYHHY 249 ++GRGDF VS + + F+V+V + +GI+E+V++ +P+K L+AS K+ NYL NAL ++ GG GI V+++G +AE+ + N+AI+ G+LR+P ++ +LAGTT+ R++ A + + KP G++ ++ + EL A E GGG V +V ING +G KPGPVF L +LL DM+ + DAVPY Y Sbjct: 132 SAGRGDFMVSPRGCGDAIFYVVVTDFPGHPS---EGIEEWVVK-VPMKTGLMASCKTNNYLLNALTAMESQDKGGMEGIWVNDAGNVAETCMGNVAIVDQGGVLRSPHYDGSILAGTTLLRVFAFAPQLIQVETGRVAKPVIFSAWDGLLTSFKFDFVRASELEEAKEILLCGGGGVTSVVSINGITVGRVKKETIGDGTSAETGKAEAAKPGPVFWALRELLAADMEGAEFTDAVPYELY 368
BLAST of NO28G00960 vs. NCBI_GenBank
Match: XP_024368815.1 (D-amino-acid transaminase, chloroplastic-like isoform X1 [Physcomitrella patens] >PNR60295.1 hypothetical protein PHYPA_003088 [Physcomitrella patens]) HSP 1 Score: 121.7 bits (304), Expect = 3.800e-24 Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 0 Query: 45 GRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGI--VRGVEYTHITLDELLSATE-AYSLGGGSVLPIVRINGKNIGGGKPGPVFKELDDLLLCDM 236 GRG+F +S+K S F + ++ L G+ + + +P+K++ A+IKSTNYL NALV AE G +GI +DE G +AE N+ LT G L PPF+++L+G T KR+ EL + +K I ++ V+ T I+L E A E + G ++P+V +GK +G G PG V L + DM Sbjct: 169 GRGNFELSAKNCLESSLFACLVEENFIDDEPLDGL-KVITSTVPIKHKDFATIKSTNYLLNALVVMEAEEKGANVGIWLDEDGNIAEGQNMNVGFLTNEGELLLPPFDRILSGCTAKRVLELVPQLIKENAIPGLKSVKQTKISLSEAKIAAEMMIIISGEMIMPVVEWDGKPVGNGNPGRVSVALRKCMRQDM 361
BLAST of NO28G00960 vs. NCBI_GenBank
Match: OGQ74736.1 (hypothetical protein A3G94_07205 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_16]) HSP 1 Score: 121.7 bits (304), Expect = 3.800e-24 Identity = 78/207 (37.68%), Postives = 115/207 (55.56%), Query Frame = 0 Query: 43 TSGRGDFSVSSKETTGSGFFVMVHRYK-SKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGIVRGVEYTHITLDELLSATEAYSLGGG-SVLPIVRINGKNIGGGKPGPVFKELDDLLLCDMKT--NYLDAVPY 246 ++G G F ++ E GS F+V+V QG+ + V +P+K A +KSTNYL N LV A+ G GI +DE G +AESS N+A +T + R PPF+ +L+G TV+R+ ELA RL QG +R + I+++E A E +G V P+V + + IG GKPGP+ ++L DL D++ + L VPY Sbjct: 125 SAGPGGFGLAPGECVGSSFYVVVFSADIYPASYYAQGV-KVVTSGVPIKPAFFARVKSTNYLPNVLVVVEAKDRGADNGIFIDERGMVAESSNMNVAFVTRDRVFRHPPFDAILSGITVQRILELA-RRLVEQGDLRDIRVADISVEEGHRAAEMMLIGSSIKVAPVVSWDDRPIGDGKPGPIARKLLDLWHEDVRAAPDQLVRVPY 329
BLAST of NO28G00960 vs. NCBI_GenBank
Match: XP_024368817.1 (D-amino-acid transaminase, chloroplastic-like isoform X3 [Physcomitrella patens] >XP_024368818.1 D-amino-acid transaminase, chloroplastic-like isoform X3 [Physcomitrella patens]) HSP 1 Score: 121.7 bits (304), Expect = 3.800e-24 Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 0 Query: 45 GRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGI--VRGVEYTHITLDELLSATE-AYSLGGGSVLPIVRINGKNIGGGKPGPVFKELDDLLLCDM 236 GRG+F +S+K S F + ++ L G+ + + +P+K++ A+IKSTNYL NALV AE G +GI +DE G +AE N+ LT G L PPF+++L+G T KR+ EL + +K I ++ V+ T I+L E A E + G ++P+V +GK +G G PG V L + DM Sbjct: 95 GRGNFELSAKNCLESSLFACLVEENFIDDEPLDGL-KVITSTVPIKHKDFATIKSTNYLLNALVVMEAEEKGANVGIWLDEDGNIAEGQNMNVGFLTNEGELLLPPFDRILSGCTAKRVLELVPQLIKENAIPGLKSVKQTKISLSEAKIAAEMMIIISGEMIMPVVEWDGKPVGNGNPGRVSVALRKCMRQDM 287
BLAST of NO28G00960 vs. NCBI_GenBank
Match: XP_024368816.1 (D-amino-acid transaminase, chloroplastic-like isoform X2 [Physcomitrella patens]) HSP 1 Score: 121.7 bits (304), Expect = 3.800e-24 Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 0 Query: 45 GRGDFSVSSKETTGSGFFVMVHRYKSKEELKLQGIDEYVIQDIPLKNRLLASIKSTNYLTNALVCESAEGMGGCLGIQVDESGRLAESSIANIAILTPHGMLRTPPFEKVLAGTTVKRLWELAEERLKPQGI--VRGVEYTHITLDELLSATE-AYSLGGGSVLPIVRINGKNIGGGKPGPVFKELDDLLLCDM 236 GRG+F +S+K S F + ++ L G+ + + +P+K++ A+IKSTNYL NALV AE G +GI +DE G +AE N+ LT G L PPF+++L+G T KR+ EL + +K I ++ V+ T I+L E A E + G ++P+V +GK +G G PG V L + DM Sbjct: 152 GRGNFELSAKNCLESSLFACLVEENFIDDEPLDGL-KVITSTVPIKHKDFATIKSTNYLLNALVVMEAEEKGANVGIWLDEDGNIAEGQNMNVGFLTNEGELLLPPFDRILSGCTAKRVLELVPQLIKENAIPGLKSVKQTKISLSEAKIAAEMMIIISGEMIMPVVEWDGKPVGNGNPGRVSVALRKCMRQDM 344 The following BLAST results are available for this feature:
BLAST of NO28G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00960 ID=NO28G00960|Name=NO28G00960|organism=Nannochloropsis oceanica|type=gene|length=2091bpback to top protein sequence of NO28G00960.1 >NO28G00960.1-protein ID=NO28G00960.1-protein|Name=NO28G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=397bpback to top protein sequence of NO28G00960.2 >NO28G00960.2-protein ID=NO28G00960.2-protein|Name=NO28G00960.2|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top Synonyms
Publications
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