NO28G00830, NO28G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00830 vs. NCBI_GenBank
Match: XP_005644176.1 (SPRY-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE19632.1 SPRY-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 119.8 bits (299), Expect = 4.600e-23 Identity = 65/165 (39.39%), Postives = 84/165 (50.91%), Query Frame = 0 Query: 112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDIFRLP 277 + D+ TVRY G+ H DVG ++G+RP+PR R +Y+E+ VL EK + VG A K F M +QPG PHSYGY G DG + GP F GDVIG G+ QE+F+TKNGK+LGVAFR + +LP Sbjct: 40 VEKDKLTVRYTGQGAHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGEK---GLIGVGFADKNFKMGKQPGWEPHSYGYHGDDG-----------------------------KKFHQNGQGEEYGPQFTLGDVIGAGIHIQRQEIFFTKNGKHLGVAFRGLPQLP 172
BLAST of NO28G00830 vs. NCBI_GenBank
Match: XP_005781905.1 (hypothetical protein EMIHUDRAFT_365889 [Emiliania huxleyi CCMP1516] >EOD29476.1 hypothetical protein EMIHUDRAFT_365889 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 117.1 bits (292), Expect = 3.000e-22 Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 115 DRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 D+R+VRY+GK NH DVG ++ DRP P A +YFE VL E+ A+ +GLA + F +HRQPG P S+GY DG GPA+G GDV+GCG+ AT+ +F+T+NG++LGVAF D+ Sbjct: 52 DKRSVRYIGKGNHGYDVGAIRTDRPCPARCALYYFEATVLDAGER---GALCIGLAGESFSLHRQPGWEPDSFGYHAEDGRKYTDSERGEVY-----------------------------GPAWGAGDVVGCGLVNATRSIFFTRNGQHLGVAFSDV 177
BLAST of NO28G00830 vs. NCBI_GenBank
Match: KOO33220.1 (spla ryanodine receptor domain-containing protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 107.8 bits (268), Expect = 1.800e-19 Identity = 58/164 (35.37%), Postives = 83/164 (50.61%), Query Frame = 0 Query: 109 HAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 + A+ D+ TVRYVG+ NH QDVG+V+ D P P+ +Y+E+ V + + + VG+A FP+ RQPG P+SY Y G DG GP FG GDV+GCG+ ++E+F+TKNG +LGVAF ++ Sbjct: 44 YLAVGKDKLTVRYVGRGNHSQDVGSVRTDWPCPQRCLVYYYEVTVQDSGSR---GLIAVGMADSAFPLTRQPGWEPNSYSYAGYDG-----------------------------RRYFDSERGEPYGPCFGAGDVVGCGLLCGSREIFFTKNGAHLGVAFSEV 175
BLAST of NO28G00830 vs. NCBI_GenBank
Match: OZJ06478.1 (hypothetical protein BZG36_00570 [Bifiguratus adelaidae]) HSP 1 Score: 101.7 bits (252), Expect = 1.300e-17 Identity = 58/168 (34.52%), Postives = 81/168 (48.21%), Query Frame = 0 Query: 109 HAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDIFRLP 277 H +S+D V +VG+ +D TV+ +RP+P FYFE+EV+S K + +G+ AK + R PG P SYGY G DG + GP + +GDVIGCGV+F + +FYTKNGK+LG AF +I + P Sbjct: 222 HLEISADGLGVVFVGQHKSDRDAATVRANRPIPPQTGIFYFEMEVVS---KGVEGFIGLGVCAKDVELARLPGWEPDSYGYHGDDG----------------------------QKFSSRSEKGKEYGPKYTKGDVIGCGVNFVDRSIFYTKNGKHLGTAFENIIKRP 358
BLAST of NO28G00830 vs. NCBI_GenBank
Match: PRW50909.1 (Ran-binding 10 [Chlorella sorokiniana]) HSP 1 Score: 101.7 bits (252), Expect = 1.300e-17 Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 + D+ +VRY G A H DVG+++ + P+P R +YFEI T ++ ++++G + + F R PG PHSYGYRG G + GP+FG GDV+G G+ E+F+TKNG++LGVAFR++ Sbjct: 1987 VGKDKLSVRYNGPAQHDNDVGSIQSNNPVPLRRLVYYFEI----TVKEASGGSISLGYSDRNFKQGRHPGFEPHSYGYRGDTG---------------------------RKHHSTLPVRGEEYGPSFGPGDVVGAGIHLTKHEIFFTKNGEHLGVAFRNV 2116
BLAST of NO28G00830 vs. NCBI_GenBank
Match: GAQ84119.1 (spla ryanodine receptor domain-containing protein [Klebsormidium nitens]) HSP 1 Score: 100.9 bits (250), Expect = 2.200e-17 Identity = 67/220 (30.45%), Postives = 96/220 (43.64%), Query Frame = 0 Query: 112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDIFRLPGHHQQQYCHSATRQGVVRRYVRPYLPNAFPTAMMPRQASSNTAATEPVPSSPSFS 332 + D+ +VRY G H DVG+++ +RP+PR+R +YFE+ V ++ + +G + F RQPG SYGY G DG GP F GDV+G GV+ ATQE+F+TKNGK+LGVAF D+ + + HS + V RP+ + R+ +PSS S S Sbjct: 92 VGKDKLSVRYTGHGQHGHDVGSIQANRPVPRERLLYYFELTVRDRGDRN---CIAIGFTDENFKHSRQPGWEAGSYGYHGDDGKAYHASGRGDAY-----------------------------GPTFTTGDVVGAGVNHATQEIFFTKNGKHLGVAFADVREI--LYPTVGLHSKNERVEVNFGKRPFKFDLEALVQEERERRQRAVELVEMPSSISHS 277
BLAST of NO28G00830 vs. NCBI_GenBank
Match: PSC76243.1 (Ran-binding 10 [Micractinium conductrix]) HSP 1 Score: 99.0 bits (245), Expect = 8.500e-17 Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 0 Query: 112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 + +R V+Y G A H DVGT++ + P+PR + +YFE+ T ++ ++++G A + F R PG HSYGYRG G + GPAFG GDV+G G+ E+F+TKNG++LG AFR + Sbjct: 28 VGKNRLAVKYSGSAQHDNDVGTIQANHPVPRRQLIYYFEV----TVKEASGGSISLGFADRNFKQGRHPGFESHSYGYRGDTG---------------------------RKHHSALPARGEEYGPAFGPGDVVGAGIHLTKHEIFFTKNGQHLGSAFRHV 157
BLAST of NO28G00830 vs. NCBI_GenBank
Match: PMD45045.1 (SPRY-domain-containing protein [Meliniomyces variabilis F]) HSP 1 Score: 97.4 bits (241), Expect = 2.500e-16 Identity = 74/271 (27.31%), Postives = 116/271 (42.80%), Query Frame = 0 Query: 11 PPLLTGLEQVLALEHSSPGEVIIAKEYNGEEYLSEEEMDEAATGWHLSYHHGDVLPS----TWDLSDSWGTINDERSALVQGMGSSCSSGHYKWRPEACGSYHAALS--SDRRTVRYVG---KANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 P L G + V LE + ++ KE + + + +A+ +L H + PS T+DL + + DE A + KW + HAAL SD + V++ G + + + ++ D P+P +YFE+ ++S KR +++ +G ++K P+ R PG P S+ Y G DG+ GP F GDVIGCGV+F T F+TKNG +LG AFR+I Sbjct: 138 PSYLKGSKYVQKLEEAHKAKLSAHKEGHSAQSSQPGSLSTSASSINL---HAKMAPSHRGMTYDLIEKAPPVEDEALAPLPS----------KWNNQ---DKHAALEVLSDGQEVKFTGPKPERDRDHEAYAIRADHPMPPQCGIYYFEVTIIS--RKREESSIGIGFSSKSVPLSRLPGWEPESWAYHGDDGHSFCCQNSGKHY-----------------------------GPPFTAGDVIGCGVNFRTGSAFFTKNGDHLGTAFREI 361
BLAST of NO28G00830 vs. NCBI_GenBank
Match: EEC73400.1 (hypothetical protein OsI_07653 [Oryza sativa Indica Group]) HSP 1 Score: 96.3 bits (238), Expect = 5.500e-16 Identity = 65/210 (30.95%), Postives = 91/210 (43.33%), Query Frame = 0 Query: 65 LPSTWDLSDSWGTINDERSA--LVQGMGSSCSSGHYKWRPEACGSYHAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 L S W WG E A + ++ SSG + A +S+DR +VRY+G H DVG V+ +RP P RA +YFE+ V + +K T ++G + F M RQPG +S GY G DGY GP F GD IG G+++ +QE F+TKNG +G ++I Sbjct: 29 LASRWRSPAEWGAAAAEMEAEPAPSELNTTNSSGLF-----------AVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQT---SIGFTTENFKMRRQPGWESNSCGYHGDDGY-----------------------------LYRGPGKSESFGPKFTSGDTIGAGINYFSQEFFFTKNGSLVGSFQKEI 195
BLAST of NO28G00830 vs. NCBI_GenBank
Match: EEE57190.1 (hypothetical protein OsJ_07135 [Oryza sativa Japonica Group]) HSP 1 Score: 96.3 bits (238), Expect = 5.500e-16 Identity = 65/210 (30.95%), Postives = 91/210 (43.33%), Query Frame = 0 Query: 65 LPSTWDLSDSWGTINDERSA--LVQGMGSSCSSGHYKWRPEACGSYHAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273 L S W WG E A + ++ SSG + A +S+DR +VRY+G H DVG V+ +RP P RA +YFE+ V + +K T ++G + F M RQPG +S GY G DGY GP F GD IG G+++ +QE F+TKNG +G ++I Sbjct: 29 LASRWRSPAEWGAAAAEMEAEPAPSELNTTNSSGLF-----------AVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQT---SIGFTTENFKMRRQPGWESNSCGYHGDDGY-----------------------------LYRGPGKSESFGPKFTSGDTIGAGINYFSQEFFFTKNGSLVGSFQKEI 195 The following BLAST results are available for this feature:
BLAST of NO28G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00830 ID=NO28G00830|Name=NO28G00830|organism=Nannochloropsis oceanica|type=gene|length=2853bpback to top protein sequence of NO28G00830.1 >NO28G00830.1-protein ID=NO28G00830.1-protein|Name=NO28G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=951bpback to top Synonyms
Publications
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