NO28G00370, NO28G00370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00370 vs. NCBI_GenBank
Match: EWM20955.1 (kh domain containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 181.0 bits (458), Expect = 9.100e-42 Identity = 116/150 (77.33%), Postives = 130/150 (86.67%), Query Frame = 0 Query: 81 ASLPPKSHEITVLLPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAK-----XXXXXXXXXXXXXXXXXXXXRKTLRWLIPAELSGLLIGKKGIGREEIQQESGA 226 +S PP++HE+TVLLP+DAVGL+IGKGGQTLKRL+EE N+ C+IRVQ YQE+ G +RGIILRG FE IENVER +++LLR RRQKA DAK XXXXXXXXXXXXXXXXXXX RKTLRWLIPAELSGLLIGKKGIGREEIQQESGA Sbjct: 104 SSPPPRAHEVTVLLPIDAVGLMIGKGGQTLKRLLEE-GNSACAIRVQDYQEVRAGSKERGIILRGSFEAIENVERAMIDLLRHRRQKAVDAKRERXXXXXXXXXXXXXXXXXXXXXKRKTLRWLIPAELSGLLIGKKGIGREEIQQESGA 252
BLAST of NO28G00370 vs. NCBI_GenBank
Match: CBN74642.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 167.2 bits (422), Expect = 1.400e-37 Identity = 109/368 (29.62%), Postives = 193/368 (52.45%), Query Frame = 0 Query: 90 ITVLLPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRR-------------QKAADAKXXXXXXXXXXXXXXXXXXXXRKT-LRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASA---AAIEQARQLVEAKVGGRAMDKAEDDFVFVNI--RAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPILVTGSIRNVFKAQRILYEKLAS 439 ++++ P DA+G++IGKGG L+ + E+ + +Q + I G +RG+ L G + + NVE+ I E L RR + A +A + T +RW++ G LIGK G G + I+ SGA +++A E+ L S ++++Y++G + AA+E R K+ GR +E + V++ +A+GF+LG G ++ + E +GA+L+VA +E+ TG E +V I G Q+ A + L D++AEWR ++ P +P+ E ++K+AVP + +IGKGG V+E+ + + +K S D ++++G+ NV +AQR++ E++A+ Sbjct: 99 LSIMCPSDAMGMLIGKGGSGLREMQEKTG---VKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKSQREAALELIR--TNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNG---EPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSGTFGNVVRAQRMILERIAN 458
BLAST of NO28G00370 vs. NCBI_GenBank
Match: XP_005854467.1 (kh domain protein [Nannochloropsis gaditana CCMP526] >EKU21891.1 kh domain protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 163.7 bits (413), Expect = 1.500e-36 Identity = 108/367 (29.43%), Postives = 180/367 (49.05%), Query Frame = 0 Query: 87 SHEITVLLPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRKTLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDK-LLYIEGASAAAIEQARQLVEAKVGGRAMDKAEDDF------VFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPK--------------DFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPILVTGSIRNVFKAQRIL 433 S+ +T+L+P +A+GL+IG+ G T + ++ N ++VQ Y+++ GC RGI L G +E + + I++ L RR R T++W IP EL G LIGK+G I ESGA ++L HE+ELPP K +Y+ G A ++A L+ KVGG F V V +RA+G L+G G ++++ E +GAR+ +A + E GS E + + G ++ A + ++ +++ WR + + E +IK ++P + +IGKGG+ ++E++A SG +K L E S D RP+++TG + V ++ L Sbjct: 233 SYTLTILVPNEAMGLLIGRAGATRQEIVSRADN--VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNS--------IIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAER-DKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGSQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRELHA-SGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQL 587
BLAST of NO28G00370 vs. NCBI_GenBank
Match: EWM22832.1 (rna-binding protein nova-2 [Nannochloropsis gaditana]) HSP 1 Score: 119.8 bits (299), Expect = 2.500e-23 Identity = 76/231 (32.90%), Postives = 118/231 (51.08%), Query Frame = 0 Query: 87 SHEITVLLPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRKTLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDK-LLYIEGASAAAIEQARQLVEAKVGGRAMDKAEDDF------VFVNIRAIGFLLGKGGVDLKKMCEASGARLQVA 311 S+ +T+L+P +A+GL+IG+ G T + ++ N ++VQ Y+++ GC RGI L G +E + + I++ L RR R T++W IP EL G LIGK+G I ESGA ++L HE+ELPP K +Y+ G A ++A L+ KVGG F V V +RA+G L+G G ++++ E +GAR+ +A Sbjct: 108 SYTLTILVPNEAMGLLIGRAGATRQEIVSRADN--VRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNS--------IIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAER-DKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLA 327
BLAST of NO28G00370 vs. NCBI_GenBank
Match: GAX99079.1 (Hypothetical protein PINS_006926 [Pythium insidiosum]) HSP 1 Score: 99.0 bits (245), Expect = 4.500e-17 Identity = 114/398 (28.64%), Postives = 198/398 (49.75%), Query Frame = 0 Query: 88 HEITVLLPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADA--------------------KXXXXXXXXXXXXXXXXXXXXRKTLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASAAAIEQARQLVEAKVGGR----AMDKAEDDFVFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPD-GRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPILVTGSIRNVFKAQRILYEKLAS------------LPPSQRQPPG 449 H + +L+P D VG IIG GG ++RL E + C++ V+ TG + R + L G I +R ++ +R + +A XXXXXXXXXXXXXXXXXXXX WL+PA G ++G G+ I +++ ++++ +++P G+T++++ I GA A E AR ++E + GGR + + + + A G L+G G +++ E +GAR+Q+ G L GS+ + + G+AAQ ++S ++ E+ + S+D +E +KL +P L+ + G ++EI K+ + + + + DA + R ++ G R VF+A+R+L + +A+ LPP +R+ G Sbjct: 195 HVLHMLIPGDDVGCIIGLGGDAIRRLSAETN---CTLSVRAASAFATG-SDRVVRLYGTPRAICVAQRRLIRCIREHQASKQNALYLPLPRDAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLLPAADVGKIMGPDGVILRAIMRDTATTIRVSAIRDMPRGATERVVSIHGARDDA-EAARAMIERRAGGRPHLASHNSKTGAYFVIPYHAAGLLIGAKGTAARQLTELTGARVQIPGQECLPLGSVNRILHVHGDAAQTEGAIDIVSHRLREFVE-------SVDASRPQEIFLKLLLPRHICECLLDQRGRLIREITEKTASRARLM---PALDA--ELRVCVLYGEERAVFRAERLLLQFVAADAIANKRCSSAGLPPRKRKLDG 575
BLAST of NO28G00370 vs. NCBI_GenBank
Match: KRX28055.1 (Far upstream element-binding protein 2 [Trichinella nelsoni] >KRX28057.1 Far upstream element-binding protein 2 [Trichinella nelsoni]) HSP 1 Score: 88.2 bits (217), Expect = 8.000e-14 Identity = 89/373 (23.86%), Postives = 152/373 (40.75%), Query Frame = 0 Query: 94 LPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRK------TLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASAAAIEQARQLVEA---------KVGGRAMDKAEDDFVFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPI-LVTGSIRNVFKAQRILYEKLASLPPSQRQPPGPS 451 +P VGLIIG+GG+++ ++ E + P+ G RG L GP +E ++ I ++ + + ++ T IP GL+IGK G + +Q+ +G + + E P G L I +E A+QL+E + G + V V A+G ++G+GG ++++ SGAR+Q + + E I G Q+ M++D + K D D + VPA +IGKGG +K+IN SGA ++ LS E + + DW + ++ G+ + A ++ K+ +PP PP P+ Sbjct: 98 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFD--VNGKPMRGCTLTGPSSSVEKAKQMISSIVTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGSAGSDKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRII--GEPNKVEYAKQLIEEIMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGE--DHNAPERTAVISGTMEQIDRATRMITDLV--------NKSAGCDSD----IFYMHVPANKTGLVIGKGGETIKQINMDSGARVE-LSRETAPN---DWEKVFVIRGTPYQINHATHLIRIKVGDIPPGTPVPPFPT 448
BLAST of NO28G00370 vs. NCBI_GenBank
Match: KRX28056.1 (Far upstream element-binding protein 2 [Trichinella nelsoni]) HSP 1 Score: 88.2 bits (217), Expect = 8.000e-14 Identity = 89/373 (23.86%), Postives = 152/373 (40.75%), Query Frame = 0 Query: 94 LPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRK------TLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASAAAIEQARQLVEA---------KVGGRAMDKAEDDFVFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPI-LVTGSIRNVFKAQRILYEKLASLPPSQRQPPGPS 451 +P VGLIIG+GG+++ ++ E + P+ G RG L GP +E ++ I ++ + + ++ T IP GL+IGK G + +Q+ +G + + E P G L I +E A+QL+E + G + V V A+G ++G+GG ++++ SGAR+Q + + E I G Q+ M++D + K D D + VPA +IGKGG +K+IN SGA ++ LS E + + DW + ++ G+ + A ++ K+ +PP PP P+ Sbjct: 98 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFD--VNGKPMRGCTLTGPSSSVEKAKQMISSIVTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGSAGSDKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRII--GEPNKVEYAKQLIEEIMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGE--DHNAPERTAVISGTMEQIDRATRMITDLV--------NKSAGCDSD----IFYMHVPANKTGLVIGKGGETIKQINMDSGARVE-LSRETAPN---DWEKVFVIRGTPYQINHATHLIRIKVGDIPPGTPVPPFPT 448
BLAST of NO28G00370 vs. NCBI_GenBank
Match: KRX78260.1 (Far upstream element-binding protein 2 [Trichinella sp. T6]) HSP 1 Score: 88.2 bits (217), Expect = 8.000e-14 Identity = 89/373 (23.86%), Postives = 152/373 (40.75%), Query Frame = 0 Query: 94 LPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRK------TLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASAAAIEQARQLVEA---------KVGGRAMDKAEDDFVFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPI-LVTGSIRNVFKAQRILYEKLASLPPSQRQPPGPS 451 +P VGLIIG+GG+++ ++ E + P+ G RG L GP +E ++ I ++ + + ++ T IP GL+IGK G + +Q+ +G + + E P G L I +E A+QL+E + G + V V A+G ++G+GG ++++ SGAR+Q + + E I G Q+ M++D + K D D + VPA +IGKGG +K+IN SGA ++ LS E + + DW + ++ G+ + A ++ K+ +PP PP P+ Sbjct: 96 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFD--VNGKPMRGCTLTGPSSSVEKAKQMISSIVTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGAAGSDKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRII--GEPNKVEYAKQLIEEIMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGE--DHNAPERTAVISGTMEQIDRATRMITDLV--------NKSAGCDSD----IFYMHVPANKTGLVIGKGGETIKQINMDSGARVE-LSRETAPN---DWEKVFVIRGTPYQINHATHLIRIKVGDIPPGTPVPPFPT 446
BLAST of NO28G00370 vs. NCBI_GenBank
Match: KRX78261.1 (Far upstream element-binding protein 2 [Trichinella sp. T6] >KRX78263.1 Far upstream element-binding protein 2 [Trichinella sp. T6]) HSP 1 Score: 88.2 bits (217), Expect = 8.000e-14 Identity = 89/373 (23.86%), Postives = 152/373 (40.75%), Query Frame = 0 Query: 94 LPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELLRFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRK------TLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASAAAIEQARQLVEA---------KVGGRAMDKAEDDFVFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPI-LVTGSIRNVFKAQRILYEKLASLPPSQRQPPGPS 451 +P VGLIIG+GG+++ ++ E + P+ G RG L GP +E ++ I ++ + + ++ T IP GL+IGK G + +Q+ +G + + E P G L I +E A+QL+E + G + V V A+G ++G+GG ++++ SGAR+Q + + E I G Q+ M++D + K D D + VPA +IGKGG +K+IN SGA ++ LS E + + DW + ++ G+ + A ++ K+ +PP PP P+ Sbjct: 96 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFD--VNGKPMRGCTLTGPSSSVEKAKQMISSIVTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGAAGSDKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRII--GEPNKVEYAKQLIEEIMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGE--DHNAPERTAVISGTMEQIDRATRMITDLV--------NKSAGCDSD----IFYMHVPANKTGLVIGKGGETIKQINMDSGARVE-LSRETAPN---DWEKVFVIRGTPYQINHATHLIRIKVGDIPPGTPVPPFPT 446
BLAST of NO28G00370 vs. NCBI_GenBank
Match: KRX94026.1 (Far upstream element-binding protein 2, partial [Trichinella pseudospiralis]) HSP 1 Score: 88.2 bits (217), Expect = 8.000e-14 Identity = 89/372 (23.92%), Postives = 149/372 (40.05%), Query Frame = 0 Query: 94 LPMDAVGLIIGKGGQTLKRLMEEVSNNTCSIRVQPYQEITTGCTQRGIILRGPFEGIENVEREIMELL-----RFRRQKAADAKXXXXXXXXXXXXXXXXXXXXRKTLRWLIPAELSGLLIGKKGIGREEIQQESGAYLKLAHEQELPPGSTDKLLYIEGASAAAIEQARQLVEA---------KVGGRAMDKAEDDFVFVNIRAIGFLLGKGGVDLKKMCEASGARLQVAGAAELETGSIEIKVRIMGEAAQVAAGKTMLSDKMAEWRKTHPPKDFSLDPDGRESSIKLAVPAAAISALIGKGGAGVKEINAKSGASIKFLSGEASHDALVDWRPI-LVTGSIRNVFKAQRILYEKLASLPPSQRQPPGPS 451 +P VGLIIG+GG+++ ++ E + P+ G RG L GP +E ++ I ++ + T IP GL+IGK G + +Q+ +G + + E P G L I +E A+QL+E + G + V V A+G ++G+GG ++++ SGAR+Q + + E I G Q+ M++D + K D D + VPA +IGKGG +K+IN SGA ++ LS E + + DW + ++ G+ + A ++ K+ +PP PP P+ Sbjct: 88 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFD--VNGKPMRGCTLTGPSSSVEKAKQMISSIVTKAGETMSLSRGQPVYGSNGPSVLYSSGGSGGGSDKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRII--GEPNKVEYAKQLIEEIMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGE--DHNAPERTAVISGTMEQIDRATRMITDLV--------NKSAGCDSD----IFYMHVPANKTGLVIGKGGETIKQINMDSGARVE-LSRETAPN---DWEKVFVIRGTPYQINHATHLIRIKVGDIPPGTPVPPFPT 437 The following BLAST results are available for this feature:
BLAST of NO28G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00370 ID=NO28G00370|Name=NO28G00370|organism=Nannochloropsis oceanica|type=gene|length=3670bpback to top protein sequence of NO28G00370.1 >NO28G00370.1-protein ID=NO28G00370.1-protein|Name=NO28G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bpback to top Synonyms
Publications
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