NO28G00250, NO28G00250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_047858971.1 (KR domain-containing protein [Archangium gephyra] >AKJ05430.1 3-oxoacyl-[acyl-carrier protein] reductase [Archangium gephyra]) HSP 1 Score: 207.2 bits (526), Expect = 5.500e-50 Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGGRE 218 + NKV+VITGASSGIG ALA+ A G VVLAAR E +L +A +G E ALPVV DV+ R++ +L+ A+A FG VDVWVNNAGRGI+K + +T+EDFDEMM VN KSA++G+QA P+F + GHIIN+SS+LGR+P+ P RS Y+A+KHALNA+T + R +E +E + V++ PG+V T+FG+N +GGG + Sbjct: 1 MDNKVVVITGASSGIGAALAELAGKKGWKVVLAARREPELRQVAARVGAE-ALPVVADVSRREDVQRILDAALARFGQVDVWVNNAGRGISKLVSQLTDEDFDEMMRVNVKSALYGIQAVLPHFQSRGRGHIINVSSMLGRVPYVPVRSAYNAAKHALNALTANLR-----QELRERYPDIHVTTFLPGVVATDFGVNALGGGMD 199
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_108075321.1 (KR domain-containing protein [Vitiosangium sp. GDMCC 1.1324] >PTL77383.1 short-chain dehydrogenase [Vitiosangium sp. GDMCC 1.1324]) HSP 1 Score: 207.2 bits (526), Expect = 5.500e-50 Identity = 109/205 (53.17%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGGRE 218 + KV+VITGAS+GIG ALA++A G VVLAAR E +L +A +G E ALPVV DV+ R++ +++ A+A FG VDVWVNNAGRGI+K + ++T+EDFDEMM VN KSA++G+QA P+F + GHIIN+SS+LGR+P+ P RS Y+A+KHALNA+TT+ R +E +E + V++ PG+V TEFG+N +GGG + Sbjct: 1 MDKKVVVITGASAGIGAALAEQAGRKGWQVVLAARREPELRQVAARVGPE-ALPVVADVSRREDVQRVMDAALARFGQVDVWVNNAGRGISKLVSELTDEDFDEMMRVNVKSALYGIQAVLPHFQSRGRGHIINVSSMLGRVPYVPVRSAYNAAKHALNALTTNLR-----QELRERYPGIHVTTFLPGVVATEFGVNALGGGMD 199
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_073564669.1 (SDR family NAD(P)-dependent oxidoreductase [Archangium sp. Cb G35] >OJT20558.1 short-chain dehydrogenase [Archangium sp. Cb G35]) HSP 1 Score: 204.9 bits (520), Expect = 2.700e-49 Identity = 110/203 (54.19%), Postives = 148/203 (72.91%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 + +KV+VITGASSGIG ALA++A G VVLAAR E +L +A G E ALPVV DV+ R++ +L+ A+A FG VDVWVNNAGRGI+K + +T+EDFDEMM VN KSA++G+QA P+F + GHIIN+SS+LGR+P+ P RS Y+A+KHALNA+T + R +E +E + V++ PG+V TEFG+N +GGG Sbjct: 1 MDDKVVVITGASSGIGAALAEQAGKKGWKVVLAARREPELRQVAARAGSE-ALPVVADVSRREDVQRILDVALARFGRVDVWVNNAGRGISKLVSQLTDEDFDEMMRVNVKSALYGIQAVLPHFQARGTGHIINVSSMLGRVPYVPVRSAYNAAKHALNALTANLR-----QELREQYPGIHVTTFLPGVVSTEFGVNALGGG 197
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_043403233.1 (KR domain-containing protein [Archangium violaceum] >KFA90250.1 short-chain dehydrogenase [Archangium violaceum Cb vi76]) HSP 1 Score: 203.8 bits (517), Expect = 6.000e-49 Identity = 108/203 (53.20%), Postives = 148/203 (72.91%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 + +KV+VITGASSGIG ALA++ G VVLAAR E +L +A +G E ALPVV DV+ R++ +L+ A+A FG VDVWVNNAGRGI+K + +T+EDFDEMM VN KSA++G+QA P+F + GH+IN+SS+LGR+P+ P RS Y+A+KHALNA+T + R +E +E + V++ PG+V TEFG+N +GGG Sbjct: 1 MDDKVVVITGASSGIGAALAEQVGKKGWKVVLAARREPELRQVAARVGPE-ALPVVADVSRREDVQRILDAALARFGRVDVWVNNAGRGISKLVSQLTDEDFDEMMRVNVKSALYGIQAVLPHFQARGTGHLINVSSMLGRVPYVPVRSAYNAAKHALNALTANLR-----QELREQYPDIHVTTFLPGVVATEFGVNALGGG 197
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_095975944.1 (KR domain-containing protein [Melittangium boletus] >ATB27093.1 short-chain dehydrogenase [Melittangium boletus DSM 14713]) HSP 1 Score: 199.1 bits (505), Expect = 1.500e-47 Identity = 107/203 (52.71%), Postives = 144/203 (70.94%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 + +KV+VITGAS GIG A A+ G VVLAAR E +L +A G E AL V DVT R++ +L+ A+ FG VDVWVNNAGRGI+K + ++T+EDFDEMM VN KSA++GMQA P+F ++ +GH+IN+SS+LGR+P+ P RS Y+A+KHALNA+T + R+E +E + VS+V PG V TEFG+N +GGG Sbjct: 1 MNDKVVVITGASGGIGAAFARLTGSKGNRVVLAARREVELHQVAAHSGPE-ALVVPADVTRREDIQRVLDAALDRFGRVDVWVNNAGRGISKLVSELTDEDFDEMMRVNVKSALYGMQAVLPHFQERGQGHLINVSSMLGRVPYVPFRSAYNAAKHALNALTANLRMEV-----RERFPHIHVSTVLPGPVATEFGVNALGGG 197
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_002627855.1 (SDR family NAD(P)-dependent oxidoreductase [Cystobacter fuscus] >EPX63605.1 3-oxoacyl-[acyl-carrier protein] reductase [Cystobacter fuscus DSM 2262]) HSP 1 Score: 194.9 bits (494), Expect = 2.800e-46 Identity = 107/205 (52.20%), Postives = 143/205 (69.76%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGGRE 218 + KV+VITGAS+GIG ALA+ GA VVLAAR E +L +A G E AL V DVT R++ +L+ A+A FG VDVWVNNAGRGI + + +T+EDFDEMM VN KSA++GMQA P+F ++ GH+IN+SS+LGR+P +RS Y+A+KHALNA+T + R +E +E + VS+V PG V T+FG N +GGG + Sbjct: 1 MDGKVVVITGASAGIGAALAQALGARGARVVLAARRESELRQVAARSGSE-ALAVPADVTLREDVRRVLDAALARFGRVDVWVNNAGRGITRPVSALTDEDFDEMMRVNVKSALYGMQAVLPHFQERGTGHLINVSSMLGRVPHVAERSAYNAAKHALNALTANLR-----QELRERFPGIHVSAVLPGPVATDFGDNALGGGTD 199
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_071899858.1 (SDR family NAD(P)-dependent oxidoreductase [Cystobacter ferrugineus] >OJH39695.1 short-chain dehydrogenase [Cystobacter ferrugineus]) HSP 1 Score: 193.4 bits (490), Expect = 8.200e-46 Identity = 105/203 (51.72%), Postives = 142/203 (69.95%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 + KV+VITGAS+GIG ALA+ G +VLAAR E +L +A G E A+ V DVT R++ +L+ A+A FGHVDVWVNNAGRGI + + +T+EDFDEMM VN KSA++GMQA P+F ++ GH+IN+SS+LGR+P +RS Y+A+KHALNA+T + R +E +E + VS+V PG V T+FG N +GGG Sbjct: 1 MDGKVVVITGASAGIGAALAQALGARGVRLVLAARRESELRRVAARSGSE-AVAVPADVTLREDVRRVLDTALARFGHVDVWVNNAGRGITRPVSALTDEDFDEMMRVNVKSALYGMQAVLPHFQERGTGHLINVSSMLGRVPHVAERSAYNAAKHALNALTANLR-----QEVRERFPGIHVSAVLPGPVATDFGDNALGGG 197
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_095985918.1 (KR domain-containing protein [Cystobacter fuscus] >ATB37626.1 3-oxoacyl-ACP reductase [Cystobacter fuscus]) HSP 1 Score: 191.8 bits (486), Expect = 2.400e-45 Identity = 107/203 (52.71%), Postives = 142/203 (69.95%), Query Frame = 0 Query: 13 LQNKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 ++ KV+VITGAS+GIG ALA+ GA VVLAAR E L +A G E AL V DVT R++ +L+ A+A FG VDVWVNNAGRGI + + +T+EDFDEMM VN KSA++GMQA P+F ++ GH+IN+SS+LGR+P +RS Y+A+KHALNA+T + R +E +E + VS+V PG V T+FG N +GGG Sbjct: 1 MEGKVVVITGASAGIGAALAQVLGARGARVVLAARRESALRRVAACSGSE-ALAVPADVTLREDVRRVLDAALARFGRVDVWVNNAGRGITRPVSALTDEDFDEMMRVNVKSALYGMQAVLPHFQERGTGHLINVSSMLGRVPHVAERSAYNAAKHALNALTANLR-----QEVRERFPGIHVSAVLPGPVATDFGDNALGGG 197
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_046713466.1 (KR domain-containing protein [Myxococcus fulvus] >AKF81375.1 short-chain dehydrogenase [Myxococcus fulvus 124B02] >SEU25720.1 NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Myxococcus fulvus]) HSP 1 Score: 186.8 bits (473), Expect = 7.600e-44 Identity = 101/201 (50.25%), Postives = 135/201 (67.16%), Query Frame = 0 Query: 15 NKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 +KVIVITGAS GIG LA+ A GA +VLAAR +D L ++A G++ +L VV DVT R + L + A+ FGH+DVWVNNAGRGI +S+ ++T++D DEM N SA++GMQA P+F + G I+N+SS LGRLP P RS YSA+KHALNA++ R + +K + V+ V PG+V TEFG N +GGG Sbjct: 2 DKVIVITGASGGIGAELARVAGARGAKLVLAARRKDALETVATRSGRD-SLAVVTDVTSRAQVEKLRDAALERFGHIDVWVNNAGRGITRSVAELTDQDLDEMWRANVNSALYGMQAVLPHFQARNAGQILNISSTLGRLPVVPHRSAYSAAKHALNALSACLRQDLQKTH-----PGIHVTVVMPGVVATEFGTNALGGG 196
BLAST of NO28G00250 vs. NCBI_GenBank
Match: WP_044194002.1 (KR domain-containing protein [Hyalangium minutum] >KFE64663.1 3-oxoacyl-[acyl-carrier protein] reductase [Hyalangium minutum]) HSP 1 Score: 184.5 bits (467), Expect = 3.800e-43 Identity = 103/201 (51.24%), Postives = 133/201 (66.17%), Query Frame = 0 Query: 15 NKVIVITGASSGIGLALAKRACVLGAMVVLAARSEDKLLSLAGELGKERALPVVMDVTHRQEHSMLLEKAVATFGHVDVWVNNAGRGINKSILDVTEEDFDEMMNVNAKSAMFGMQAAYPYFVQQKEGHIINLSSVLGRLPFPPQRSLYSASKHALNAITTSFRLEAEKEEGKEGGAKVKVSSVSPGMVGTEFGINVVGGG 216 +KVIVITGASSGIG LA++A GA +VLAAR + +L ++A GKE A+ VV D T R + L + A+ FG +DVWVNNAGRGI + + ++T+ED D MM N KSA++GMQ P+F + G I+N+SS L RLP P RS YSA+KHALN +T RLE K+ + VS V PG+V TEFG N +GGG Sbjct: 2 DKVIVITGASSGIGAELARQAGEKGAKLVLAARRQPELEAVAARSGKE-AIAVVTDATQRADMERLRDAALQRFGRIDVWVNNAGRGITRPVSELTDEDLDVMMRDNVKSALYGMQVVLPHFKARNAGQILNVSSGLARLPLAPFRSAYSAAKHALNGLTACLRLEL-----KQSHPGIMVSVVMPGVVATEFGSNALGGG 196 The following BLAST results are available for this feature:
BLAST of NO28G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following mRNA feature(s) are a part of this gene:
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00250 ID=NO28G00250|Name=NO28G00250|organism=Nannochloropsis oceanica|type=gene|length=2156bpback to top protein sequence of NO28G00250.1 >NO28G00250.1-protein ID=NO28G00250.1-protein|Name=NO28G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=280bpback to top protein sequence of NO28G00250.2 >NO28G00250.2-protein ID=NO28G00250.2-protein|Name=NO28G00250.2|organism=Nannochloropsis oceanica|type=polypeptide|length=212bpback to top protein sequence of NO28G00250.3 >NO28G00250.3-protein ID=NO28G00250.3-protein|Name=NO28G00250.3|organism=Nannochloropsis oceanica|type=polypeptide|length=235bpback to top protein sequence of NO28G00250.4 >NO28G00250.4-protein ID=NO28G00250.4-protein|Name=NO28G00250.4|organism=Nannochloropsis oceanica|type=polypeptide|length=235bpback to top protein sequence of NO28G00250.5 >NO28G00250.5-protein ID=NO28G00250.5-protein|Name=NO28G00250.5|organism=Nannochloropsis oceanica|type=polypeptide|length=215bpback to top protein sequence of NO28G00250.6 >NO28G00250.6-protein ID=NO28G00250.6-protein|Name=NO28G00250.6|organism=Nannochloropsis oceanica|type=polypeptide|length=235bpback to top protein sequence of NO28G00250.7 >NO28G00250.7-protein ID=NO28G00250.7-protein|Name=NO28G00250.7|organism=Nannochloropsis oceanica|type=polypeptide|length=450bpback to top protein sequence of NO28G00250.8 >NO28G00250.8-protein ID=NO28G00250.8-protein|Name=NO28G00250.8|organism=Nannochloropsis oceanica|type=polypeptide|length=235bpback to top Synonyms
Publications
|