NO28G00240, NO28G00240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_008867338.1 (hypothetical protein H310_04667 [Aphanomyces invadans] >ETW04382.1 hypothetical protein H310_04667 [Aphanomyces invadans]) HSP 1 Score: 162.9 bits (411), Expect = 3.900e-36 Identity = 93/225 (41.33%), Postives = 137/225 (60.89%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLL---SEEKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWG---SFLAYFCPAHEGSSPYVGD--GKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 WS+PDA+ F VRG NY+ D+ K PS ++ + L+GVDL +E++N A S P S + S+ F V++ +P S + YF P SP + D LL +FL+GDD FRN R K+IP VEG ++VK AVG+ P ++G K+ YH AN FE+++DISS+ A ++GMVK T+++ VDLAF+L+ + EEELPE +L VR ++++ Sbjct: 458 WSEPDASRFAVRGPNYLVDKKKTPSKKSRFRLVGVDLFAFDNEKERYNLA-SRPGSHVQ--------SATGFTFVVNMIIPSPNNLSMVFYFQP----DSPTIFDENSPFSDLLNDFLDGDDAFRNSRFKLIPTVVEGTFIVKQAVGSVPTLLGNKLSCPYHRGANYFEVDIDISSNSVANTVVGMVKGVTKVLVVDLAFLLESQAEEELPETILGTVRLQNVSL 669
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_009828254.1 (hypothetical protein H257_05175 [Aphanomyces astaci] >ETV82585.1 hypothetical protein H257_05175 [Aphanomyces astaci]) HSP 1 Score: 159.5 bits (402), Expect = 4.300e-35 Identity = 92/223 (41.26%), Postives = 133/223 (59.64%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLL---SEEKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWG-SFLAYFCPAHEGSSPYVGD--GKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 WS+PDA+ F VRG NY+ D+ K PS +A + L+GVDL +E++N A+ S + FII M P S + YF P SP + D LL +FL+GDD FRN R K+IP VEG ++VK AVG+ P ++G K+ YH N FE+++DISS+ A ++GMVK T+++ VDLAF+L+ ++EEELPE +L VR ++++ Sbjct: 456 WSEPDASRFAVRGPNYLVDKKKTPSKKARFRLVGVDLFAFDNEKERYNLANRPGS-------HVQTAPGFTFIINMIIPSPNNLSMVFYFQP----DSPTLLDENSPFSDLLADFLDGDDAFRNSRFKLIPTVVEGTFIVKQAVGSVPTLLGNKLSCPYHRGPNYFEVDIDISSNSVANTVVGMVKGVTKVLVVDLAFLLESQSEEELPEAILGTVRLQNVSL 667
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_012202851.1 (hypothetical protein SPRG_08217 [Saprolegnia parasitica CBS 223.65] >KDO26414.1 hypothetical protein SPRG_08217 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 159.5 bits (402), Expect = 4.300e-35 Identity = 87/223 (39.01%), Postives = 138/223 (61.88%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLL---LSEEKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWG---SFLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY+ D+ K PS+ + ++L+GVDLL ++ E+++ A S P S + S+ F V++ +P S + YF P + ++ + + LL +FL+GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISSS A ++GMV T+I+ VD+AF+L+ + EEELPE +L VR H+++ Sbjct: 465 WGEPDASLFAVRGPNYLVDKKKTPSAPSRFHLVGVDLLSYEVASERYHVA-SRPGSLVQ--------SATSFTFVVNMIIPSPNNLSMVFYFQP--DSANIFTENTPFSELLNDFLDGDDAFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGDNYFEVDLDISSSSVANTVVGMVTGVTKILVVDMAFLLEAQTEEELPEAILGTVRLQHVSL 676
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_008608781.1 (hypothetical protein SDRG_04871 [Saprolegnia diclina VS20] >EQC37848.1 hypothetical protein SDRG_04871 [Saprolegnia diclina VS20]) HSP 1 Score: 158.3 bits (399), Expect = 9.600e-35 Identity = 86/223 (38.57%), Postives = 138/223 (61.88%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLL---LSEEKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWG---SFLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY+ D+ K PS+ + ++L+GVDLL ++ E+++ A S P S + S+ F V++ +P S + Y+ P + ++ + + LL +FL+GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISSS A ++GMV T+I+ VD+AF+L+ + EEELPE +L VR H+++ Sbjct: 465 WGEPDASLFAVRGPNYLVDKKKTPSAPSRFHLVGVDLLSYEVASERYHVA-SRPGSLVQ--------SATSFTFVVNMIIPSPNNLSMVFYYQP--DSANIFTENTPFSELLNDFLDGDDAFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGDNYFEVDLDISSSSVANTVVGMVTGVTKILVVDMAFLLEAQTEEELPEAILGTVRLQHVSL 676
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_002895081.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60484.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 158.3 bits (399), Expect = 9.600e-35 Identity = 86/223 (38.57%), Postives = 137/223 (61.43%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSE---EKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGS---FLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY++D+ K+PS+ A ++ +GVDLL E E++N +S S S + R SS+ F V++ +P + YF P + + + LL +F +GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISS+ A ++GMV+ T+ + VD+AF+L+ + +EELPE +L AVR H+++ Sbjct: 472 WGEPDASLFSVRGHNYLTDKKKIPSAPAMFHTVGVDLLSFESPAERYNISSRSDS--------VGRTSSK-FTFVVNMIIPGPENVCMVFYFHPVRD--NVFEDGSGFSELLNDFFDGDDQFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGENYFEVDIDISSNSVANTVVGMVQGVTKSLVVDMAFLLEAQTDEELPEVILGAVRMQHISL 683
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_002896473.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67500.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 158.3 bits (399), Expect = 9.600e-35 Identity = 86/223 (38.57%), Postives = 137/223 (61.43%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSE---EKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGS---FLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY++D+ K+PS+ A ++ +GVDLL E E++N +S S S + R SS+ F V++ +P + YF P + + + LL +F +GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISS+ A ++GMV+ T+ + VD+AF+L+ + +EELPE +L AVR H+++ Sbjct: 472 WGEPDASLFSVRGHNYLTDKKKIPSAPAMFHTVGVDLLSFESPAERYNISSRSDS--------VGRTSSK-FTFVVNMIIPGPENVCMVFYFHPVRD--NVFEDGSGFSELLNDFFDGDDQFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGENYFEVDIDISSNSVANTVVGMVQGVTKSLVVDMAFLLEAQTDEELPEVILGAVRMQHISL 683
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_009533926.1 (hypothetical protein PHYSODRAFT_304784 [Phytophthora sojae] >EGZ11181.1 hypothetical protein PHYSODRAFT_304784 [Phytophthora sojae]) HSP 1 Score: 157.9 bits (398), Expect = 1.300e-34 Identity = 87/223 (39.01%), Postives = 138/223 (61.88%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSE---EKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGS---FLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W++PDA+ F VRG NY++D+ K+PS+ A ++ +GVDLL E E++N SS P S + R SS+ F V++ +P + YF P + + + LL +F +GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISS+ A ++GMV+ T+ + VD+AF+L+ + +EELPE +L AVR H+++ Sbjct: 472 WAEPDASLFSVRGHNYLNDKKKIPSAPAMFHTVGVDLLSFESVAERYN-ISSRPDS-------IGRTSSK-FTFVVNMIIPGPENVCMVFYFQPVRD--NVFEDGSPFSELLNDFFDGDDQFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGENYFEVDIDISSNSVANTVVGMVQGVTKSLVVDMAFLLEAQTDEELPEIILGAVRMQHISL 683
BLAST of NO28G00240 vs. NCBI_GenBank
Match: XP_008912035.1 (hypothetical protein PPTG_16174 [Phytophthora parasitica INRA-310] >ETI37208.1 hypothetical protein F443_16783 [Phytophthora parasitica P1569] >ETK77415.1 hypothetical protein L915_16316 [Phytophthora parasitica] >ETL30867.1 hypothetical protein L916_16212 [Phytophthora parasitica] >ETL84114.1 hypothetical protein L917_16021 [Phytophthora parasitica] >ETM37294.1 hypothetical protein L914_16141 [Phytophthora parasitica] >ETN02553.1 hypothetical protein PPTG_16174 [Phytophthora parasitica INRA-310] >ETO65948.1 hypothetical protein F444_16795 [Phytophthora parasitica P1976] >ETP07057.1 hypothetical protein F441_16619 [Phytophthora parasitica CJ01A1] >ETP35154.1 hypothetical protein F442_16611 [Phytophthora parasitica P10297]) HSP 1 Score: 157.9 bits (398), Expect = 1.300e-34 Identity = 88/223 (39.46%), Postives = 137/223 (61.43%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSE---EKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGS---FLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY++D+ K+PS+ A ++ +GVDLL E E++N SS P S + R SS+ F V++ +P + YF P + + + LL +F +GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISS+ A ++GMV+ T+ + VDLAF+L+ + +EELPE +L AVR H+++ Sbjct: 471 WGEPDASLFSVRGHNYLTDKKKIPSAPAMFHTVGVDLLSFESPAERYN-ISSRPDS-------IGRTSSK-FTFVVNMIIPGPENVCMVFYFQPVRD--NVFEDGSGFSELLNDFFDGDDQFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGENYFEVDIDISSNSVANTVVGMVQGVTKSLVVDLAFLLEAQTDEELPEVILGAVRMQHISL 682
BLAST of NO28G00240 vs. NCBI_GenBank
Match: KUF78511.1 (hypothetical protein AM587_10012155 [Phytophthora nicotianae]) HSP 1 Score: 157.9 bits (398), Expect = 1.300e-34 Identity = 88/223 (39.46%), Postives = 137/223 (61.43%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSE---EKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGS---FLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY++D+ K+PS+ A ++ +GVDLL E E++N SS P S + R SS+ F V++ +P + YF P + + + LL +F +GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISS+ A ++GMV+ T+ + VDLAF+L+ + +EELPE +L AVR H+++ Sbjct: 471 WGEPDASLFSVRGHNYLTDKKKIPSAPAMFHTVGVDLLSFESPAERYN-ISSRPDS-------IGRTSSK-FTFVVNMIIPGPENVCMVFYFQPVRD--NVFEDGSGFSELLNDFFDGDDQFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGENYFEVDIDISSNSVANTVVGMVQGVTKSLVVDLAFLLEAQTDEELPEVILGAVRMQHISL 682
BLAST of NO28G00240 vs. NCBI_GenBank
Match: KUF98385.1 (Aladin [Phytophthora nicotianae]) HSP 1 Score: 157.9 bits (398), Expect = 1.300e-34 Identity = 88/223 (39.46%), Postives = 137/223 (61.43%), Query Frame = 0 Query: 545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSE---EKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGS---FLAYFCPAHEGSSPYVGDGKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762 W +PDA+ F VRG NY++D+ K+PS+ A ++ +GVDLL E E++N SS P S + R SS+ F V++ +P + YF P + + + LL +F +GDD FRN R K+IP VEG +++K +VG+ P ++G K+ YH N FE+++DISS+ A ++GMV+ T+ + VDLAF+L+ + +EELPE +L AVR H+++ Sbjct: 437 WGEPDASLFSVRGHNYLTDKKKIPSAPAMFHTVGVDLLSFESPAERYN-ISSRPDS-------IGRTSSK-FTFVVNMIIPGPENVCMVFYFQPVRD--NVFEDGSGFSELLNDFFDGDDQFRNSRFKLIPTVVEGSFIIKQSVGSKPTLLGNKLKCPYHRGENYFEVDIDISSNSVANTVVGMVQGVTKSLVVDLAFLLEAQTDEELPEVILGAVRMQHISL 648 The following BLAST results are available for this feature:
BLAST of NO28G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00240 ID=NO28G00240|Name=NO28G00240|organism=Nannochloropsis oceanica|type=gene|length=5074bpback to top protein sequence of NO28G00240.1 >NO28G00240.1-protein ID=NO28G00240.1-protein|Name=NO28G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bpback to top Synonyms
Publications
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