NO28G00240.1, NO28G00240.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G00240.1
Unique Name	NO28G00240.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2328
Alignment location	chr28:91386..96459 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:91386..96459 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO28G00240.1 vs.
Match: XP_008867338.1 (hypothetical protein H310_04667 [Aphanomyces invadans]; ETW04382.1 hypothetical protein H310_04667 [Aphanomyces invadans])

HSP 1 Score: 162.9 bits (411), Expect = 3.900e-36
Identity = 93/225 (41.33%), Postives = 138/225 (61.33%), Query Frame = 0

Query:  545 WSQPDATEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLL---SEEKHNCASSSPSSFLSRCRRLPRPSSECFIIVMHFSLPWGSFLA---YFCPAHEGSSPYVGD--GKLDALLKNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPLANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERVLFAVRFHHLNV 762
            WS+PDA+ F VRG NY+ D+ K PS ++ + L+GVDL      +E++N AS  P S +         S+  F  V++  +P  + L+   YF P     SP + D       LL +FL+GDD FRN R K+IP  VEG ++VK AVG+ P ++G K+   YH  AN FE+++DISS+  A  ++GMVK  T+++ VDLAF+L+ + EEELPE +L  VR  ++++
Sbjct:  458 WSEPDASRFAVRGPNYLVDKKKTPSKKSRFRLVGVDLFAFDNEKERYNLASR-PGSHVQ--------SATGFTFVVNMIIPSPNNLSMVFYFQP----DSPTIFDENSPFSDLLNDFLDGDDAFRNSRFKLIPTVVEGTFIVKQAVGSVPTLLGNKLSCPYHRGANYFEVDIDISSNSVANTVVGMVKGVTKVLVVDLAFLLESQAEEELPETILGTVRLQNVSL 669

The following BLAST results are available for this feature:

BLAST of NO28G00240.1 vs.

BLAST of NO28G00240.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_008867338.1	3.900e-36	41.33	hypothetical protein H310_04667 [Aphanomyces invad...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO28G00240	NO28G00240	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO28G00240.1	NO28G00240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO28G00240.1.cds1	NO28G00240.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds2	NO28G00240.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds3	NO28G00240.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds4	NO28G00240.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds5	NO28G00240.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds6	NO28G00240.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds7	NO28G00240.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds8	NO28G00240.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds9	NO28G00240.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds10	NO28G00240.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds11	NO28G00240.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds12	NO28G00240.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds13	NO28G00240.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds14	NO28G00240.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds15	NO28G00240.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds16	NO28G00240.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds17	NO28G00240.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00240.1.cds18	NO28G00240.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr28:91386..96459+
coding sequence from alignment at chr28:91386..96459+

mRNA sequence

>NO28G00240.1 ID=NO28G00240.1|Name=NO28G00240.1|organism=Nannochloropsis oceanica|type=mRNA|length=2328bp
ATGTCAGACCCCTCACTCCGTCCTGGTCTCACCCCCCACCGGCAGCAGCA
CCAACAACCACAATCAGCAGAACACCCCGGGGACATTGTCACCTCGCCTA
CGAACACTATCTCCACGCGCGGTGGCGGAGTTTCATCGGTAGGAGGAGCT
TCGACTTCGTTTCATACGCCCGGCTCGACAGCATTCTCCCATTTTAGCGG
GAGCGACGAAAGCCCGTTACTGTCAAACGGACAAGCAGGAGCAGCAGGAG
GACGAAATAACGGCCACAGGAGGCCCCAACAGCAACAGCAGCAACAACAG
CAGCAGCAGCAGCAGTGTCGAGGGATGGGCGAGGAAGAGAGGGAGGACGG
GAGAGAGGACGGAGAGGAGGACATGATGTCCAGGTTTGGAAGCCCGTCAC
CGGATGCCATGGCGCAGCAGGCGAAGGGCAGTAGTAGCAGAAGCAGCAAA
AGGAGAAGTAGCAGCATTGATGGTGGGAAGAAGGCCAGTGGGTGTGTGTG
CGGGGCACTGCGCTCCTTCCTCTCCAGCAGCAGCAGCAGCAGTAAGGAGA
GTGACATTAGCCACAACAGCAGTAGGAGCGAGAGTACCAGCAGTAGGGGG
AGCAGCAACAGCAGCAGCAGCCGATTGAGAAGATCTTGGAGGACATCAAC
CTCCGTCTTGCCCACCGTGACGCTGCGACAAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGGA
GGAGGGGACGGAAAAATCGAGCTGAGTCCTTGCCTTTCCTCCCTCCCTTC
CTCCCTCCCTTCCTCCTTCAACTCCTCGTCCTCGACCTTTGCCGGGCGGC
CCCACCATATGGGCCATCGGTCCGAATCGAATTTGGACTTTTTTGACGCC
GTGGAATCGATGACTGAAGCGCCCGATATCCTGCAGTCGTCCACCTCTCT
CGTGCACCGCGATGCACAAGGCTCGATCGTGGTGGAGGAAGGGAGAGAGG
AGGAGGTTCGCGGGCTCCTGTGTCGAAACGACACGGCCATCCTCCAACTG
GAACTGTTCGGGAAGATATACAACATTACGGTCCGCACCACCGCGGCTTC
TATTCCGGTGGCTTTTCTACTGACGGAGACCCTGCGCCGGTACGCCGGAA
TCAAGGTCTTCCACGACGAAGAGGAGGGCCATGCTCCCTCCTCCTCCTCC
TCCCCTTCCTCTGCCTCCTCCTCTCACATTTCCTCTTTCCTCATCTCTCC
CTGGAAGAGACTAAGTGGAGGGAGGAAGAAGAAGACACCAACCACTCCCG
TGGCGCAGAGTCCCGCCCCCCTCCCTCGAAACGATCGCTTCATTTCAGGT
GTGCACTACGGCGTGGAGGAGCAGCTGCCCTTCACTCACGAGCTCCTGGG
CGATATTTTACGCGTCATCATCGCTGAGGAGGGAGGGGGGAGTGGAGGGG
CGGCGACGACGGAGAAGGAGGAGGCTTCTCTTGTGGAAGGCGGGGAGGAG
AAGGGAGGGGAGGGCCGGGGGGAGGAGAGGTGGAGGAGGATGAAGACGAG
GAGCTTTTCCATGATGAGAGGATTGTACCCCTCCACGAGCATTTCACGAT
ACCCGGGAGAAGGGGAGGATGGAGGGAACTGCTGGAGCCAGCCGGATGCG
ACAGAATTTATGGTTCGGGGCATTAACTACATGAGTGATAGGGTCAAGGT
CCCCTCCTCCCAAGCCGCCTATAATCTGCTAGGTGTCGACCTCCTACTCT
CGGAAGAGAAACACAACTGCGCCTCCTCCTCCCCCTCCTCCTTTCTCTCC
CGCTGTCGTCGCCTCCCGCGTCCCTCCTCCGAATGCTTCATCATTGTCAT
GCATTTCTCCCTGCCCTGGGGTTCCTTCCTCGCATATTTCTGCCCTGCTC
ATGAAGGCTCTTCCCCTTACGTGGGAGACGGGAAGCTCGACGCCCTCCTC
AAGAACTTTCTAGAAGGTGATGATACCTTTCGGAATCAGAGATTGAAGGT
CATTCCTCGCTGCGTCGAGGGCCCTTGGATGGTCAAAACAGCCGTTGGCA
CCACGCCCGCCATCATGGGCACTAAGATCCTCCACACCTACCACCCACTC
GCCAACGCCTTTGAGATCGAGGTGGACATCTCCTCCTCCGTCCCTGCCCA
ATACATTCTGGGGATGGTCAAGTCGTTCACACAAATCGTCTCGGTCGATC
TGGCTTTCGTCCTCCAGGGGGAGAATGAGGAGGAGCTTCCCGAGCGCGTC
CTTTTTGCCGTCCGTTTCCATCACCTGAATGTGCCTAAAGCCCCGAGCTA
TGACGCCTGGGAGAACAGGGAGGGCTGA

protein sequence of NO28G00240.1

>NO28G00240.1-protein ID=NO28G00240.1-protein|Name=NO28G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bp
MSDPSLRPGLTPHRQQHQQPQSAEHPGDIVTSPTNTISTRGGGVSSVGGA
STSFHTPGSTAFSHFSGSDESPLLSNGQAGAAGGRNNGHRRPQQQQQQQQ
QQQQQCRGMGEEEREDGREDGEEDMMSRFGSPSPDAMAQQAKGSSSRSSK
RRSSSIDGGKKASGCVCGALRSFLSSSSSSSKESDISHNSSRSESTSSRG
SSNSSSSRLRRSWRTSTSVLPTVTLRQGGGGGGGGGAAAAAAAAAAAAAG
GGDGKIELSPCLSSLPSSLPSSFNSSSSTFAGRPHHMGHRSESNLDFFDA
VESMTEAPDILQSSTSLVHRDAQGSIVVEEGREEEVRGLLCRNDTAILQL
ELFGKIYNITVRTTAASIPVAFLLTETLRRYAGIKVFHDEEEGHAPSSSS
SPSSASSSHISSFLISPWKRLSGGRKKKTPTTPVAQSPAPLPRNDRFISG
VHYGVEEQLPFTHELLGDILRVIIAEEGGGSGGAATTEKEEASLVEGGEE
KGGEGRGEERWRRMKTRSFSMMRGLYPSTSISRYPGEGEDGGNCWSQPDA
TEFMVRGINYMSDRVKVPSSQAAYNLLGVDLLLSEEKHNCASSSPSSFLS
RCRRLPRPSSECFIIVMHFSLPWGSFLAYFCPAHEGSSPYVGDGKLDALL
KNFLEGDDTFRNQRLKVIPRCVEGPWMVKTAVGTTPAIMGTKILHTYHPL
ANAFEIEVDISSSVPAQYILGMVKSFTQIVSVDLAFVLQGENEEELPERV
LFAVRFHHLNVPKAPSYDAWENREG*

mRNA from alignment at chr28:91386..96459+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO28G00240.1 ID=NO28G00240.1|Name=NO28G00240.1|organism=Nannochloropsis oceanica|type=mRNA|length=5074bp|location=Sequence derived from alignment at chr28:91386..96459+ (Nannochloropsis oceanica)
ATGTCAGACCCCTCACTCCGTCCTGGTCTCACCCCCCACCGGCAGCAGCA
CCAACAACCACAATCAGCAGAACACCCCGGGGACATTGTCACCTCGCCTA
CGAACACTATCTCCAGTACGTGTCACATTCCTCAAGTAGCCACCCTACCT
GTCCCCTTCCCCACCTCCCATCCTCCCTCCCTCTCTCCCCTCTCTCCTGT
GATTGCCCCTCCCAAGTTCCGACGCACGTGACAGGCTCCTCGCTTGCTAT
TATCGCTTGCCAACAATCCTCCTTCATTCCCTCTCTCTCTCCTGCCCCTT
TCCCATCCATCTCAGCGCGCGGTGGCGGAGTTTCATCGGTAGGAGGAGCT
TCGACTTCGTTTCATACGCCCGGCTCGACAGCATTCTCCCATTTTAGCGG
GTAGGGAGGGAGGGAAGAAGGGAAGGAGGGAGGGAGGGAGGGAGGGCTGC
TACAGATTGAATTGAGTCTATACCACCTATTTTGTTGTCTCAAAACAGGA
GCGACGAAAGCCCGTTACTGTCAAACGGACAAGCAGGAGCAGCAGGAGGA
CGAAATAACGGCCACAGGAGGCCCCAACAGCAACAGCAGCAACAACAGCA
GCAGCAGCAGCAGTGTCGAGGGATGGGCGAGGAAGAGAGGGAGGACGGGA
GAGAGGACGGAGAGGAGGACATGATGTCCAGGTTTGGAAGCCCGTCACCG
GATGCCATGGCGCAGCAGGTAGGGAGGGAGGGAGGGAGGGAAGGAAGGAG
GTGAGAAGGGACGGGGCAGAGGCTGTTCTGTGGAAGCATTCAGTCTGATG
TATCGTGCGTGTATATGCTGCATAATAGGCGAAGGGCAGTAGTAGCAGAA
GCAGCAAAAGGAGAAGTAGCAGCATTGATGGTGGGAAGAAGGCCAGTGGG
TGTGTGTGCGGGGCACTGCGCTCCTTCCTCTCCAGCAGCAGCAGCAGCAG
TAAGGAGAGTGACATTAGCCACAACAGCAGTAGGAGCGAGAGTACCAGCA
GTAGGGGGAGCAGCAACAGCAGCAGCAGCCGATTGAGAAGATCTTGGAGG
ACATCAACCTCCGTCTTGCCCACCGTGACGCTGCGACAAGGTAAGGGAGG
GGGGGAGTGAGGGAGGGAGGGAGGGAAGGAGGGGGGTTGAGAGGGAGGGA
AGGAGGGGGGTTGAGAGGGAGAGAGGATTTATTGGGGATGGAAATCATTC
ACGGCCTTGCACATGCGCCCTCTTTGCTAACCACAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
TGGAGGAGGGGACGGAAAAATCGAGCTGAGTCCTTGCCTTTCCTCCCTCC
CTTCCTCCCTCCCTTCCTCCTTCAACTCCTCGTCCTCGACCTTTGCCGGG
CGGCCCCACCATATGGGCCATCGGTGAGGGAGGGAGGGAGGGAGGGAGGG
AAGGGGCTAGGGAGGGAGGGGGAGATGAGAATTTGACCGAGTAACCTGAT
GTGTCATGCTGATCATTACTCCATCTCCTTCTTCCTCTTTCTCCCCTTTC
CTCTCTCTTCTCAGGTCCGAATCGAATTTGGACTTTTTTGACGCCGTGGA
ATCGATGACTGAAGCGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAAGAGACGCCTCGTCCAAAGAACGCTTAGATTG
TGCCTTTCCCTCCCTCCCTTCCTCCCTCCTTCCCTCCCTCCTTGTCTTGA
TCGTGCCCGCCATTTCCGATCCGTCCATTCGCGACTGAGCCCTCCCTCCC
TCCCTCCCTAGCCCGATATCCTGCAGTCGTCCACCTCTCTCGTGCACCGC
GATGCACAAGGCTCGATCGTGGTGGAGGAAGGGAGAGAGGAGGAGGTTCG
CGGGCTCCTGTGTCGAAACGACACGGCCATCCTCCAACTGGAACTGTTCG
GGAAGATATACAACATTACGGTAAGGAAGGACAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAAGGAGGGCGGGCAGGCGTGTACTTGTC
AGCTGGCTCAAGGTCAGGACACGAATGTATTGAGTCACCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTACCTCAGGTCCGCACCACCGCGGCTTCTAT
TCCGGTGGCTTTTCTACTGACGGAGACCCTGCGCCGGTACGCCGGAATCA
AGGTAGGTAGGGAGGGAGGGAGGGAAGGCTGTGATATGAAGGGAAAGGGA
ATGGAGGGAATAGATAGGCTGGTCCTCATTCTTATTCTTGCGGGTTCACC
CGCCCTCCCTCCCTCCCTCACTCCCTCCCTCCCTCCATTCCTCCCTCCCT
CCATTCCTCCCTCCCTGCTTGTCTCTCTCCGTCCGCCCCTCTTTCCCTAT
CTACATCTCTCACTTCATTGCTTCTATACATCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCCCCCCTCCCTCCCTCCCTCAGGTCTTCCACGACG
AAGAGGAGGGCCATGCTCCCTCCTCCTCCTCCTCCCCTTCCTCTGCCTCC
TCCTCTCACATTTCCTCTTTCCTCATCTCTCCCTGGAAGAGACTAAGTGG
AGGGAGGAAGAAGAAGACACCAACCACTCCCGTGGTAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAAGGATATTGTTCCGCTTGTGAGGCACGCACGCACA
AAAGAGCCATGTCGCCAATTCCTCCCTCCCTCCCTCCCTCCCTCCCCCCC
TCCCTCCCTCCCTCCCTCCGTAATTTGCTAGGCGCAGAGTCCCGCCCCCC
TCCCTCGAAACGATCGCTTCATGTCTGCCATCTCTCCTCCTCCTCCCCCC
CTCCTCCCCCTCCACCGTCCTCTTCTTCTCCTCTGCCCCCTCCCGGGAAG
GAGGGGGCAGAGGGCGGGAGGGAGGGCGGGGTCGGGCTGGGCGAGAGCGG
TAGCAAGGCCGAAATCCACCACCTGATTCCGGCATGTCGGGGATTGATGA
ACACGAGGACGGGTGAGGGAGGGAGGGAGGGAGGGGAAGAAAGACCGATC
CTGTGAATTAGAATAGGGCATGACTCATTTTCCTTTCTCTCTATCTCCCT
CCCTCCCTTCTTCTCTGAGTTCAGGTGTGCACTACGGCGTGGAGGAGCAG
CTGCCCTTCACTCACGAGCTCCTGGGCGATATTTTACGCGTCATCATCGC
TGAGGAGGGAGGGGGGAGTGGAGGGGCGGCGACGACGGAGAAGGAGGAGG
CTTCTCTTGTGGAAGGCGGGGAGGAGAAGGGAGGGGAGGGCCGGGGGGAG
GAGAGGTGGAGGAGGATGAAGACGAGGAGCTTTTCCATGATGAGAGGATT
GTACCCCTCCACGAGCATTTCACGATACCCGGGAGAAGGGGAGGATGGAG
GGTAAGGGGGGCCGGAAAAGAGGGAGAGAGGGAGGGAGGGATTGTTTTTG
TGCGTTTACACCGAGGAGAGGGAGGGAGGGAGGGAGGGAGAGAACCCGAC
CAAAGGAAGGAATGACATCTGAAACCCTCATCTCCTCCTCCCTCCCTCCC
TCCCTCGCAGGAACTGCTGGAGCCAGCCGGATGCGACAGAATTTATGGTT
CGGGGCATTAACTACATGAGTGATAGGGTAGGGAGGGAGGGAAGGCGGGA
GGGAGGGAGGGAGGGAGAGAGGCTGCCCATGTGCACCCCTCCCGCAACAA
ACCTCGATTCTCACCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTGCAGGTCAAGGTCCCCTCCTCCCAAGCCGCCTATAATCTG
CTAGGTGTCGACCTCCTACTCTCGGAAGAGAAACACAACTGCGCCTCCTC
CTCCCCCTCCTCCTTTCTCTCCCGCTGTCGTCGCCTCCCGCGTCCCTCCT
CCGAATGCTTCATCATTGTCATGCATTTCTCCCTGCCCTGGGGTTCCTTC
CTCGCATATTTCTGGTACGTTGTTCTTCCCTCCCCCCCTCCCTCCCTCCC
TCCTCATCACTGCTTCCGCCACTCAACAAGGGAGGAGGGAAGGAAGGAGG
GAGGGTAGGAGGAATCATCATTTATAAAACTCCAACCACAAAAGAAAGAG
GTTATACCCAAGATTTCCTCCCTCCCTCCCTCCCTCCCTCCTTCCAGCCC
TGCTCATGAAGGCTCTTCCCCTTACGTGGGAGACGGGAAGCTCGACGCCC
TCCTCAAGAACTTTCTAGAAGGTGATGATACCTTTCGGAATCAGAGGTAC
GTACCTCCCTCGCGCCTTCCCTCTTTCCTACGTCCATAAGTTGCTCACTC
ATATCCTTCCTCCCCCCCTCCCTCCCTCCCTCCGCCTCTCCTTCGTCTTC
AAACACACAGATTGAAGGTCATTCCTCGCTGCGTCGAGGGCCCTTGGATG
GTCAAAACAGCCGGTACGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TTCCTTCCTACTTTCCACAGCCGACCCCTCCCTCCCTCCCTCCCTCCTCA
GTTGGCACCACGCCCGCCATCATGGGCACTAAGATCCTCCACACCTACCA
CCCACTCGCCAACGCCTTTGAGGTACGTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCTCTCCCTCCTTCCCTCCCCATCACGCCCGCCTTTGTCGAGGCCG
TCCAAATAACACCCCTCCCTCCTTTCCTCCTTTCCTCCCTCCCCCCCTCC
CTCTAATGCCCCCTCCTTAGATCGAGGTGGACATCTCCTCCTCCGTCCCT
GCCCAATACATTCTGGGGATGGTCAAGTCGTTCACACAAATCGTCTCGGT
CGATCTGGCTTTCGTCCTCCAGGTATCTTCCCCCCCCCTCCCTCTCTCCC
GTCCTCCCCCTCCTCCTCCGTCCCTCCTGCGCTCTTCCTCCCGACACTCT
CACACACCTTCTCCCTCCCTCCCCCCCTCCGTCCCTCCCATTTTCCCTCC
CCTTTTCCACCAGGGGGAGAATGAGGAGGAGCTTCCCGAGCGCGTCCTTT
TTGCCGTCCGTTTCCATCACCTGAATGTGCCTAAAGCCCCGAGCTATGAC
GCCTGGGAGAACAGGGAGGGCTGA

Coding sequence (CDS) from alignment at chr28:91386..96459+

>NO28G00240.1 ID=NO28G00240.1|Name=NO28G00240.1|organism=Nannochloropsis oceanica|type=CDS|length=2328bp|location=Sequence derived from alignment at chr28:91386..96459+ (Nannochloropsis oceanica)
ATGTCAGACCCCTCACTCCGTCCTGGTCTCACCCCCCACCGGCAGCAGCA
CCAACAACCACAATCAGCAGAACACCCCGGGGACATTGTCACCTCGCCTA
CGAACACTATCTCCACGCGCGGTGGCGGAGTTTCATCGGTAGGAGGAGCT
TCGACTTCGTTTCATACGCCCGGCTCGACAGCATTCTCCCATTTTAGCGG
GAGCGACGAAAGCCCGTTACTGTCAAACGGACAAGCAGGAGCAGCAGGAG
GACGAAATAACGGCCACAGGAGGCCCCAACAGCAACAGCAGCAACAACAG
CAGCAGCAGCAGCAGTGTCGAGGGATGGGCGAGGAAGAGAGGGAGGACGG
GAGAGAGGACGGAGAGGAGGACATGATGTCCAGGTTTGGAAGCCCGTCAC
CGGATGCCATGGCGCAGCAGGCGAAGGGCAGTAGTAGCAGAAGCAGCAAA
AGGAGAAGTAGCAGCATTGATGGTGGGAAGAAGGCCAGTGGGTGTGTGTG
CGGGGCACTGCGCTCCTTCCTCTCCAGCAGCAGCAGCAGCAGTAAGGAGA
GTGACATTAGCCACAACAGCAGTAGGAGCGAGAGTACCAGCAGTAGGGGG
AGCAGCAACAGCAGCAGCAGCCGATTGAGAAGATCTTGGAGGACATCAAC
CTCCGTCTTGCCCACCGTGACGCTGCGACAAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGGA
GGAGGGGACGGAAAAATCGAGCTGAGTCCTTGCCTTTCCTCCCTCCCTTC
CTCCCTCCCTTCCTCCTTCAACTCCTCGTCCTCGACCTTTGCCGGGCGGC
CCCACCATATGGGCCATCGGTCCGAATCGAATTTGGACTTTTTTGACGCC
GTGGAATCGATGACTGAAGCGCCCGATATCCTGCAGTCGTCCACCTCTCT
CGTGCACCGCGATGCACAAGGCTCGATCGTGGTGGAGGAAGGGAGAGAGG
AGGAGGTTCGCGGGCTCCTGTGTCGAAACGACACGGCCATCCTCCAACTG
GAACTGTTCGGGAAGATATACAACATTACGGTCCGCACCACCGCGGCTTC
TATTCCGGTGGCTTTTCTACTGACGGAGACCCTGCGCCGGTACGCCGGAA
TCAAGGTCTTCCACGACGAAGAGGAGGGCCATGCTCCCTCCTCCTCCTCC
TCCCCTTCCTCTGCCTCCTCCTCTCACATTTCCTCTTTCCTCATCTCTCC
CTGGAAGAGACTAAGTGGAGGGAGGAAGAAGAAGACACCAACCACTCCCG
TGGCGCAGAGTCCCGCCCCCCTCCCTCGAAACGATCGCTTCATTTCAGGT
GTGCACTACGGCGTGGAGGAGCAGCTGCCCTTCACTCACGAGCTCCTGGG
CGATATTTTACGCGTCATCATCGCTGAGGAGGGAGGGGGGAGTGGAGGGG
CGGCGACGACGGAGAAGGAGGAGGCTTCTCTTGTGGAAGGCGGGGAGGAG
AAGGGAGGGGAGGGCCGGGGGGAGGAGAGGTGGAGGAGGATGAAGACGAG
GAGCTTTTCCATGATGAGAGGATTGTACCCCTCCACGAGCATTTCACGAT
ACCCGGGAGAAGGGGAGGATGGAGGGAACTGCTGGAGCCAGCCGGATGCG
ACAGAATTTATGGTTCGGGGCATTAACTACATGAGTGATAGGGTCAAGGT
CCCCTCCTCCCAAGCCGCCTATAATCTGCTAGGTGTCGACCTCCTACTCT
CGGAAGAGAAACACAACTGCGCCTCCTCCTCCCCCTCCTCCTTTCTCTCC
CGCTGTCGTCGCCTCCCGCGTCCCTCCTCCGAATGCTTCATCATTGTCAT
GCATTTCTCCCTGCCCTGGGGTTCCTTCCTCGCATATTTCTGCCCTGCTC
ATGAAGGCTCTTCCCCTTACGTGGGAGACGGGAAGCTCGACGCCCTCCTC
AAGAACTTTCTAGAAGGTGATGATACCTTTCGGAATCAGAGATTGAAGGT
CATTCCTCGCTGCGTCGAGGGCCCTTGGATGGTCAAAACAGCCGTTGGCA
CCACGCCCGCCATCATGGGCACTAAGATCCTCCACACCTACCACCCACTC
GCCAACGCCTTTGAGATCGAGGTGGACATCTCCTCCTCCGTCCCTGCCCA
ATACATTCTGGGGATGGTCAAGTCGTTCACACAAATCGTCTCGGTCGATC
TGGCTTTCGTCCTCCAGGGGGAGAATGAGGAGGAGCTTCCCGAGCGCGTC
CTTTTTGCCGTCCGTTTCCATCACCTGAATGTGCCTAAAGCCCCGAGCTA
TGACGCCTGGGAGAACAGGGAGGGCTGA

Synonyms

Publications