NO27G01670, NO27G01670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01670 vs. NCBI_GenBank
Match: OQR82296.1 (vesicle-trafficking protein SEC22b [Achlya hypogyna]) HSP 1 Score: 263.5 bits (672), Expect = 6.200e-67 Identity = 127/223 (56.95%), Postives = 164/223 (73.54%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M LT ARV DG++LVAS ++A + ++ +D YK Q KQ+++KLN RSP K IESGP F YL++ CYLT +DK YP++L F YLEEI GF+ EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP+S +N SKL DLADI ++M+KNIQEVLNRGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G ++V+Y KFF Sbjct: 1 MPILTFIARVSDGMILVASMESAGDYNDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEDGNCYLTFSDKNYPKRLAFLYLEEIHVGFVDELQRDHGDNWRNTVTTVARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKLNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFVVLVLYFKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_012198434.1 (hypothetical protein SPRG_04635 [Saprolegnia parasitica CBS 223.65] >KDO30734.1 hypothetical protein SPRG_04635 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 261.2 bits (666), Expect = 3.100e-66 Identity = 126/223 (56.50%), Postives = 164/223 (73.54%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M LT ARV DG++LVAS ++A + + +D YK Q KQ+++KLN RSP K IESGP F YL+++ CYLT +DK YP++L F YLEEI GF+ EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP+S +N SK+ DLADI ++M+KNIQEVLNRGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G ++V+Y KFF Sbjct: 1 MPILTFIARVSDGMILVASMESAGDYHDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEEGNCYLTFSDKNYPKRLAFLYLEEIHAGFVDELQRDHGDNWRDTVTTIARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKVNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_009843914.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV66543.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 260.8 bits (665), Expect = 4.000e-66 Identity = 124/223 (55.61%), Postives = 167/223 (74.89%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M LT ARV DG+LLVAS ++A + ++ +D YK Q KQ+L+KLN RSP K I+SG +F YL+++ +CYLTL+DK YP++L F YLE+I GFI EL RD G W+ V T ARPYAFIKFDK+IQ KR++Y DP+S +N SKL DLADI ++M++NIQEVLNRGE +D +SQ SS + + SK++KWGAKKLS+ A+YQ+Y P + + ++V+Y KFF Sbjct: 1 MPILTFIARVSDGMLLVASMESAGDYNDNLDTYKQQGKQILKKLNQRSPGKCSIDSGAYAFHYLIEEGVCYLTLSDKNYPKRLAFLYLEDIHGGFIDELRRDHGDNWRDTVTTVARPYAFIKFDKYIQKKRKEYTDPSSSQNMSKLNNDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWGAKKLSLQAMYQKYGPLVAIALFVVLVVYFKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_008877922.1 (hypothetical protein H310_12576 [Aphanomyces invadans] >ETV93580.1 hypothetical protein H310_12576 [Aphanomyces invadans]) HSP 1 Score: 260.0 bits (663), Expect = 6.800e-66 Identity = 124/223 (55.61%), Postives = 167/223 (74.89%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M LT ARV DG+LLVAS ++A + ++ +D YK Q KQ+++KLN RSP K I+SG +F YL++ +CYLTL+DK YP++L+F YLE+I GFI EL RD G W+ V T ARPYAFIKFDK+IQ KR++Y DP+S +N SKL DLADI ++M++NIQEVLNRGE +D +SQ SS + + SK++KWGAKKLS+ A+YQ+Y P + + ++VIY KFF Sbjct: 1 MPILTFIARVSDGMLLVASMESAGDYNDNLDTYKQQGKQIMKKLNQRSPGKCSIDSGAYAFHYLIEDGVCYLTLSDKNYPKRLVFLYLEDIHAGFIDELRRDHGDNWRDTVTTVARPYAFIKFDKYIQKKRKEYTDPSSSQNMSKLNNDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWGAKKLSLQAMYQKYGPLVAIALFVVLVIYFKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_008611589.1 (hypothetical protein SDRG_07531 [Saprolegnia diclina VS20] >EQC34717.1 hypothetical protein SDRG_07531 [Saprolegnia diclina VS20]) HSP 1 Score: 259.6 bits (662), Expect = 8.900e-66 Identity = 125/223 (56.05%), Postives = 163/223 (73.09%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M LT ARV DG++LVAS ++ + + +D YK Q KQ+++KLN RSP K IESGP F YL+++ CYLT +DK YP++L F YLEEI GF+ EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP+S +N SK+ DLADI ++M+KNIQEVLNRGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G ++V+Y KFF Sbjct: 1 MPILTFIARVSDGMILVASMESTGDYHDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEEGNCYLTFSDKNYPKRLAFLYLEEIHAGFVDELQRDHGDNWRDTVTTIARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKVNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: OQR82114.1 (vesicle-trafficking protein SEC22b [Thraustotheca clavata]) HSP 1 Score: 259.2 bits (661), Expect = 1.200e-65 Identity = 127/223 (56.95%), Postives = 165/223 (73.99%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M LT ARV DG+LLVAS ++A + ++ +D YK Q KQ+++KLN RSP K IESG F YL+D+ CYLTL+DK YP++L F YLEEI GF+ EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP+S +N SKL DLADI ++M+KNIQ+VL+RGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G ++V+Y KFF Sbjct: 1 MPILTFIARVADGMLLVASMESAGDYNDNLDTYKQQGKQIMKKLNQRSPTKCSIESGSYCFHYLIDEGNCYLTLSDKNYPKRLAFLYLEEIHRGFVDELYRDHGENWRVVVTTVARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKLNNDLADIHNVMRKNIQDVLSRGEAIDRVSQISSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_008900889.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETI53361.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK93208.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL46623.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL99769.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM52912.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN13824.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETP23149.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP51161.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >KUF84893.1 Vesicle-trafficking protein SEC22b [Phytophthora nicotianae]) HSP 1 Score: 255.8 bits (652), Expect = 1.300e-64 Identity = 123/223 (55.16%), Postives = 167/223 (74.89%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M +T ARV DG+LLVAS ++ + + +D YK QAKQ++++L+ RSP K IESG +F YL+ + +CYLTLAD+G+P++L F YLEE+ GF++EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP+S +N +L +DLADI +IM+KNIQEVLNRGER++++S+ SS L + SK KWGAKKL M A+Y+QY P + + L+VIY+KFF Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHAGFVEELERDSGSNWRDVVTTVARPYAFIKFDKFIQKKRKEYADPSSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVALFVLLVIYIKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: CCA14301.1 (vesicletrafficking protein SEC22b putative [Albugo laibachii Nc14]) HSP 1 Score: 255.4 bits (651), Expect = 1.700e-64 Identity = 124/223 (55.61%), Postives = 168/223 (75.34%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M +T AR+ DG+LLVAS ++ + S +D+YK QAKQ++++L+ RS K IESG +F YL+ +N+CYLTL+D+ +P++L F YLEEI+ GFI+EL RD W+ V TAARPYAFIKFDKFIQ KR++Y DP+S +N S+L DLADI +IM++NIQEVLNRGER++++S+ SS L + SK KWGAKKL M A+Y+QY P +G L+VIY+KFF Sbjct: 1 MPIITFVARISDGMLLVASMESVGDTSGNLDMYKQQAKQIMKRLDQRSATKCSIESGKYTFHYLIHENVCYLTLSDRSFPKRLAFLYLEEIQKGFIEELERDHHGSWRDAVTTAARPYAFIKFDKFIQRKRKEYTDPSSSQNMSRLNNDLADIHNIMRQNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIAAVGAFILLVIYIKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: ETO82046.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1976]) HSP 1 Score: 254.6 bits (649), Expect = 2.900e-64 Identity = 123/223 (55.16%), Postives = 166/223 (74.44%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M +T ARV DG+LLVAS ++ + + +D YK QAKQ++++L+ RSP K IESG +F YL+ + +CYLTLAD+G+P++L F YLEE+ GF++EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP+S +N +L +DLADI +IM+KNIQEVLNRGER++++S+ SS L + SK KWGAKKL M A+Y+QY P + + L+VIY KFF Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHAGFVEELERDSGSNWRDVVTTVARPYAFIKFDKFIQKKRKEYADPSSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVALFVLLVIYTKFF 223
BLAST of NO27G01670 vs. NCBI_GenBank
Match: OWZ23281.1 (Vesicle-trafficking protein SEC22b [Phytophthora megakarya]) HSP 1 Score: 254.2 bits (648), Expect = 3.700e-64 Identity = 123/223 (55.16%), Postives = 166/223 (74.44%), Query Frame = 0 Query: 1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224 M +T ARV DG+LLVAS ++ + + +D YK QAKQ++++L+ RSP K IESG +F YL+ + +CYLTLAD+G+P++L F YLEE+ GF++EL RD G W+ V T ARPYAFIKFDKFIQ KR++Y DP S +N +L +DLADI +IM+KNIQEVLNRGER++++S+ SS L + SK KWGAKKL M A+Y+QY P + + L+VIY+KFF Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHKGFVEELERDSGNNWRDVVTTVARPYAFIKFDKFIQKKRKEYADPNSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVVLFVLLVIYIKFF 223 The following BLAST results are available for this feature:
BLAST of NO27G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01670 ID=NO27G01670|Name=NO27G01670|organism=Nannochloropsis oceanica|type=gene|length=2620bpback to top protein sequence of NO27G01670.1 >NO27G01670.1-protein ID=NO27G01670.1-protein|Name=NO27G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bpback to top Synonyms
Publications
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