NO27G01140, NO27G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01140 vs. NCBI_GenBank
Match: EWM20987.1 (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 309.7 bits (792), Expect = 1.200e-80 Identity = 191/297 (64.31%), Postives = 219/297 (73.74%), Query Frame = 0 Query: 21 GADAEE-YEDEGKVTNGGGKCLVSYSSDTVATASMDTEGRSSATNESSAPSSPPPTLHDLPYLVTAAASSALLSPTTVTSRLQHLCPALSLFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGGR 317 G++AEE + + + +G + L S A ++G + ++ SSA + PP LPYLV +AASS+LLSP SR+ LCP LSL AVV +LL GG +AL+HS+L L W+Q RAP SA YY AF VLWV+LCLPST +ELCGGFIFG PV L+T G+AKP GCCLAFLLGRCVAADSLR GLLLPP XXXXXXXXXXXXX RALFLAMERHPWK+ LLLRFMYLPIAVKNYGMA LPCPF +FALCTLAASLPYTLLWAH GASSRSLYDV+ G GGR Sbjct: 11 GSEAEEGKKGQYQAMDGLNRPLTPTESAACALQKEKSDGSLALSSASSASAIPP----SLPYLV-SAASSSLLSP--ARSRIWLLCPVLSLLAVVSLLLVTGGTLLALFHSRLTDLMAWVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPV--------RXXXXXXXXXXXXXXRALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALPCPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGR 292
BLAST of NO27G01140 vs. NCBI_GenBank
Match: EWM26339.1 (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 165.2 bits (417), Expect = 3.600e-37 Identity = 92/246 (37.40%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 101 LQHLCPALSLFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLL-------------------------PPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGG---RHG 319 L+ L L + +VV+I G Y +++ + W++ AP SA YY LW++LCLPST +EL GG IF +PVAL+T + K +GC LAFLL + A+ +LR+ L P+ RA+F+AME HPWK+ LLRF+ +PI++KNYGMA LPCP H+F LCT AS+P+TL+W + G S+++L + + G G RHG Sbjct: 164 LRRLRSMLLVLSVVLICAVAGSYLCVRYRDQVLEGSEWIRAHAPQSAVYYALITALWIILCLPSTIIELLGGAIFSYPVALLTLTVGKQLGCMLAFLLAKVFASPTLRDALGHSSHSPTRGKEPNESVVENNDQEGGDAPSLRHSRFPAAARPSKPMSKRKRTIRAMFIAMECHPWKITFLLRFLPIPISIKNYGMAFLPCPTHVFFLCTFVASIPFTLIWVNLGESTKNLLEALNGGGAAMKRHG 409
BLAST of NO27G01140 vs. NCBI_GenBank
Match: EWM28436.1 (hypothetical protein Naga_100924g3 [Nannochloropsis gaditana]) HSP 1 Score: 115.9 bits (289), Expect = 2.500e-22 Identity = 97/369 (26.29%), Postives = 148/369 (40.11%), Query Frame = 0 Query: 43 SYSSDTVATASMDTE------GRSSATNESSAPSSPPPTLHDLP----YLVTAAASSALLSPTTVTSRLQHLC----PALSLFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXA-----------------------------------------------------------------------------------RALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRG 315 S+ T AT + T+ G S + S P + PT LP L T + SS + + + + + LF +VV+LLA+G +A Y +L+ ++Q+RAP SA Y + LW++LCLP+T +E+ G I+ +PVA ++ + K +GC L F +G+C+ S ++ L T A AL A+++HPW++C LLR + +PI KNYGMA LP P I++LC L A +P+T+LW H G S RSL + + G G Sbjct: 26 SHPESTSATTTTPTDDGTVYTGHSYHNSNGSVPLTRGPTSSLLPPPPLDLETQSCSSTTIGHRSRGAACRDFLINHRRFVFLFFLVVLLLALGSFALAQYKDELLQGAQYIQDRAPLSAVYMALLLALWIILCLPATLLEVVAGMIYTWPVAFVSLTVGKQLGCNLGFSIGQCITTGSFQDNFLSKLTKGEQDAVARARALERASSAGPRAGGELEXXXXXXXXXXXXXXXXXXXXXXXRQVAPQANGQVPTPHVASMVGGDARPARXXXXXXXXXXXXXXXXXXXXXXXGTPKDALLWAVKKHPWQICFLLRLLPVPIGAKNYGMACLPFPVLIYSLCVLVAEMPFTILWIHIGRSCRSLLEAMNGHG 394
BLAST of NO27G01140 vs. NCBI_GenBank
Match: XP_008869069.1 (hypothetical protein H310_05973 [Aphanomyces invadans] >ETW02464.1 hypothetical protein H310_05973 [Aphanomyces invadans]) HSP 1 Score: 76.3 bits (186), Expect = 2.200e-10 Identity = 65/240 (27.08%), Postives = 97/240 (40.42%), Query Frame = 0 Query: 93 SPTTVTSRLQHLCPALSLFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGGRHGGKGLPRALEATAAV 333 +P + R H+ + AVV ++ + ++ L W Q+ Y F VVLC PST +L G+IFGF K +G +AFLLGR V D++R L P RA L +ER+ + LLL+F Y+PI +KNYG+A PF +F + T L + G S+ + +++ R + L A V Sbjct: 26 APKESSPRTSHV--LAGILAVVFCVVVILSLWAFAQTQAFRELVRWEQDHQVLGGLIYVLFYAACVVLCCPSTIFDLLAGYIFGFGFGTAVAMGGKTLGSVVAFLLGRYVMHDTIRRKLTEGP---------------------PVLRAWALLLERNELQFVLLLQFAYIPIFLKNYGLAVAGVPFGLFLWTNVVIGGARTWLAVYIGHSTAHITEILTSHAARGDARVAQEVLMIVAVV 242
BLAST of NO27G01140 vs. NCBI_GenBank
Match: GBG30522.1 (Golgi apparatus membrane protein tvp38 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 75.9 bits (185), Expect = 2.900e-10 Identity = 45/165 (27.27%), Postives = 81/165 (49.09%), Query Frame = 0 Query: 149 YYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGR 314 YY F+ +WV LP + +E+ G++FGF V ++ + L K +G ++ LL R D ++ LL R L A++ + + +++R YLP+ VKNYG+A+L + ++ +S+P+ W GAS+ +L D+ +G+ Sbjct: 371 YYSMFLAVWVAALLPCSVLEMVPGYLFGFRVGVVVSILGKNLGTVMSLLLTRFFLRDMVQRRLL---------------------TRFPILRTLEKAVKMEGFPVIVMIRCAYLPMIVKNYGLASLDIDVFKIWIASIVSSIPFAAAWTAVGASATNLADIFDGK 514
BLAST of NO27G01140 vs. NCBI_GenBank
Match: XP_009032608.1 (hypothetical protein AURANDRAFT_70582 [Aureococcus anophagefferens] >EGB12998.1 hypothetical protein AURANDRAFT_70582 [Aureococcus anophagefferens]) HSP 1 Score: 73.9 bits (180), Expect = 1.100e-9 Identity = 59/187 (31.55%), Postives = 83/187 (44.39%), Query Frame = 0 Query: 150 YGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGGRHGGKGLPRALEATAAVGIEG 337 Y A + +W++ LP++ +E+ GFI GF A + + L K +G +F +G D++R ++ R L LA++R P+ CL LR Y+P AV+NY A PF FA TL S Y LLWA G+ S DV G G K L L A + G Sbjct: 538 YVALLAVWLLCLLPTSVLEVAAGFILGFWRAALCSTLGKFLGSVTSFGIGAYGCRDAVRAHVI----------------GGDAAQESGYLRGLELALQREPFGTCLALRLAYVPEAVQNYVPAVFDAPFVAFAAATLVGSSLYALLWAKLGSQLSSASDV--GADGMSPEKVLFMCLGAAGLAAVFG 706
BLAST of NO27G01140 vs. NCBI_GenBank
Match: XP_009826874.1 (hypothetical protein H257_04171 [Aphanomyces astaci] >ETV83444.1 hypothetical protein H257_04171 [Aphanomyces astaci]) HSP 1 Score: 73.6 bits (179), Expect = 1.400e-9 Identity = 63/226 (27.88%), Postives = 90/226 (39.82%), Query Frame = 0 Query: 108 LSLFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGRCVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGGRHGGKGLPRALEATAAVG 334 +S A + L+ V G++ L W Q Y V+LC PST ++L G+IFGF V + +G AFLLGR V D++R L RA L +ER+ + +L++F Y+P+ VKNYG+A L F +F LW H R+L V G H + L++ AA G Sbjct: 29 VSTVAGALCLVVVVGLWAFTQTQTFRDLVRWEQTHQVSGGLIYVLIYAACVILCCPSTVLDLLAGYIFGFGVGTAVAVGGRTLGSVAAFLLGRYVMQDTVRQKL---------------------HDGQPMLRAWALLLERNEIQFVVLVQFAYIPLFVKNYGLALLNVSFGLF-------------LWTHVVCGVRTLLTVYIGHSATH----MTELLKSHAASG 216
BLAST of NO27G01140 vs. NCBI_GenBank
Match: OQR95846.1 (ATP-binding Cassette (ABC) superfamily [Achlya hypogyna]) HSP 1 Score: 73.2 bits (178), Expect = 1.900e-9 Identity = 53/176 (30.11%), Postives = 76/176 (43.18%), Query Frame = 0 Query: 138 WMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGR-CVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEG 313 W++ Y +VLCLP+T EL G++FGF + +AK G CLAF LGR + A LR A L LA WK+ L R ++PIA+KNYG++ LP PF +F TL P+ + + G S+ + ++ G Sbjct: 35 WLRAHQLMGGVLYTVGFTASIVLCLPATLFELIAGYVFGFWGGWAISIVAKTAGSCLAFCLGRYLLHARVLR--------------------LLDSGAPLFRALGLLLARSDMKWKIVCLARAAWMPIAIKNYGLSVLPVPFSLFFWSTLLLGTPFGGISCYLGHSATQVSSLLSG 190
BLAST of NO27G01140 vs. NCBI_GenBank
Match: XP_008620873.1 (hypothetical protein SDRG_16441 [Saprolegnia diclina VS20] >EQC25703.1 hypothetical protein SDRG_16441 [Saprolegnia diclina VS20]) HSP 1 Score: 71.6 bits (174), Expect = 5.500e-9 Identity = 61/224 (27.23%), Postives = 96/224 (42.86%), Query Frame = 0 Query: 110 LFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGR-CVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGGRHGGKGLPRALEATAAV 333 L +V +AVG ++ + S W++ Y VVLCLP+T EL G+IFGF + + + K G CL+F +GR + A LR A L L+ WK+ L R ++PIA+KNYG++ LP PF +F TL P+ + + G S+ + ++ G+ K + A+ AT+ + Sbjct: 8 LAVLVGAAIAVGVLWHSASSSSFNHSVHWLRAHPATGGLLYILLYTCCVVLCLPATLFELVAGYIFGFWGGWVISIVGKTTGSCLSFYIGRYFLHARVLR--------------------ILESGAPMFRALGLLLSRPDMKWKIVCLARVAWMPIAIKNYGLSVLPVPFPMFFWSTLILGTPFGGISCYLGHSATEVSSLLSGKHESGYFKVILMAVGATSGL 211
BLAST of NO27G01140 vs. NCBI_GenBank
Match: XP_012204038.1 (hypothetical protein SPRG_09446 [Saprolegnia parasitica CBS 223.65] >KDO25172.1 hypothetical protein SPRG_09446 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 70.9 bits (172), Expect = 9.300e-9 Identity = 60/224 (26.79%), Postives = 95/224 (42.41%), Query Frame = 0 Query: 110 LFAVVVILLAVGGIFMALYHSKLMGLTTWMQERAPDSAFYYGAFVVLWVVLCLPSTFVELCGGFIFGFPVALITTGLAKPMGCCLAFLLGR-CVAADSLRNGLLLPPTXXXXXXXXXXXXXXXXXXXXXXARALFLAMERHPWKMCLLLRFMYLPIAVKNYGMATLPCPFHIFALCTLAASLPYTLLWAHTGASSRSLYDVVEGRGGRHGGKGLPRALEATAAV 333 L +V +AVG ++ + S W++ Y VVLCLP+T EL G++FGF + + K G CL+F +GR + A LR A L L+ WK+ L R ++PIA+KNYG++ LP PF +F TL P+ + + G S+ + ++ G+ K + A+ AT+ + Sbjct: 9 LAVLVGAAIAVGVLWHSASSSSFNHSVHWLRAHPATGGLLYTLLYTCCVVLCLPATLFELVAGYVFGFWGGWAISIVGKTAGSCLSFYIGRYFLHARVLR--------------------VLESGAPMFRALGLLLSRPDMKWKIVCLARVAWMPIAIKNYGLSVLPVPFPMFFWSTLILGTPFGGISCYLGHSATEVSSLLSGKHESSCFKFVLMAIGATSGL 212 The following BLAST results are available for this feature:
BLAST of NO27G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01140 ID=NO27G01140|Name=NO27G01140|organism=Nannochloropsis oceanica|type=gene|length=2274bpback to top protein sequence of NO27G01140.1 >NO27G01140.1-protein ID=NO27G01140.1-protein|Name=NO27G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
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