Properties
Property Name | Value |
Description | Unknown protein |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr27 | genome | chr27:292394..294994 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Homology
BLAST of NO27G00840 vs. NCBI_GenBank
Match: EWM20996.1 (hypothetical protein Naga_100081g10 [Nannochloropsis gaditana]) HSP 1 Score: 185.7 bits (470), Expect = 8.500e-44 Identity = 95/116 (81.90%), Postives = 106/116 (91.38%), Query Frame = 0 Query: 1 MMAANYPSASTYGAVEDPRVHDRTALLKGTIQLTNETNELAAGIGENLREQRTSLEDGSTRIREMKGFAGEARRLLNQMARRAACHRVTLWGIIVFLLVCIGLTVYRLLTNRGHII 117
MMAA+YP+A TYGAVE+ VHDRTALLKGTI+LT ETN+LAAGIGE++R QR +LEDGSTRIREMKGFAGEARR+LNQMARRAA HR TLWGIIVFL +CIGLT+YRL TNRGHII
Sbjct: 1 MMAASYPAAYTYGAVEE--VHDRTALLKGTIRLTEETNQLAAGIGEDMRGQRVALEDGSTRIREMKGFAGEARRILNQMARRAAWHRATLWGIIVFLSLCIGLTLYRLFTNRGHII 114
The following BLAST results are available for this feature:
BLAST of NO27G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 ( BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match Name | E-value | Identity | Description | |
EWM20996.1 | 8.500e-44 | 81.90 | hypothetical protein Naga_100081g10 [Nannochlorops... | [more] |
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Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00840 ID=NO27G00840|Name=NO27G00840|organism=Nannochloropsis oceanica|type=gene|length=2601bp ACACACAGAGCCGCTGCCGCTGTCGGGAGATGATGGCAGCAAATTATCCT TCCGCGTCCACGTACGGTGCCGTGGAGGATCCGCGTGTGgtaagtcctca tctctttccgacctccccaccccggccatgccgcttgtctgactagtgtt gtcgtcttgcggcacgaattaacggtcatgctcacacacctatactctca cagCATGATCGTACGGCATTGCTCAAGGGCACCATTCAGCTGACGAACGA GACGAATGAGCTGGCTGCGGGCATTGGGGAAAACCTGCGGGAACAACGGA CCTCCTTGGAGGACGGGTCGACACGCATACGAGAGATGAAGGGGTTTGCA GGGGAGGCACGGCGGCTTCTCAATCAAATGGCACGGCGTGCAGCTTGCCA CCGTGTCACATTGTGGGGCATCATTGTGTTCTTGCTGGTGTGTATCGGCT TGACCGTCTATCGACTTCTTACAAATCGCGGGCACATCATATGAGAGCAG AAAGCGAGGGCCAGGGAGGGGAGACAAGAAAGGCAATTTTGTCCAACCAT CGTACATTTAGAAAATAATGTAAAACGATAGTAGCAGAGGGAGTGCGTAA AACAGGTGCATGGATGAGGACGACATTTTGTCATGCTTTTCTTGGCCTAC GATTTGTTTGTTCTTTTGTGCTTCCTAAATTGATTTGGTTCAGCATTGGA GAGAAGAGAAATGAAGACGCAAACACAGCATGCTTTTTCATGTATGATTA CTTGATGGGATCGTAAATGCCGCCATAGATAGACATGGAGAAAAATCGAC ATTTGCGCAGCTTGTGGGTGTCGGAAGCGGATGTCTTCGTGAGCGATGGA GTGGACAGAGCGAAAGCATTTCGTTGTATGATACAAATAAATTTCTTTGT CTACATACGCTCGTTCTACCCTCCTTCCTCCTCCCAACGTCCCTCTTTTC CTCCTATTTCTGTCCATGCAAGCGGTCGAAAGCTTTGAATCGCTCAAGAC TTTCCATCGACGTGGTGGACCGACAAGACACCAGAGCCTGCTCCACATCC TTCCAGCTGATCGCTGGCGGGGGAAGAGGAGAAAGAGGAGGGAGAGAAAG AAAGGATGTCTTACCACTACTACTGGACGGCTGCTGCTGCTGCTGCTGCT GTTGCTGTTGCCTGGCCAAAGCATGCAACGCCGCCCTTCTCACCAAATTT GCCATATCTGCCCCCGAGAAGCCCTCTGTACGTTCCGCCACCTCTTCCTC TCTCCCTTCCTGGTCATTCTCCTCCCATAACATTTTCTTTTTCAACCCTT TGAACATTTCCAATCTCTCTTTCTGGTCAGGTAAAGGCACGTACACCAAT TTGTCAAATCTCCCGGGTCGGAAAAATGCTGGATCAATCGCCTCCGGTGC ATTCGTGGCCGCCAACACACTCACAAACCCTCTTTCTATCTCTCCCTCCC TGTCTCCCTCCCCTCCTCCTTCCACCCCTGATCTCAGCTCATCCATACTC AGAAGCAATTGCGTCGCCAGCCTCGCTCCCCCCCCTCCCCCTTCACCTCC TCCTCCTCCCCTTGCTGTGAAGAGTGCCTGAAACTCATCAATGAAGACAA CACACGGCCTGGCTCTCCTGGCAGCTCTCAGAGCCTCTCTCACTATCTCT TCCCCCCTCCCTACCTCCCCCCTCACCACATCCGATATTTTCAAACTTAA AAAGCCCGCACCCGTCTGGCAGGCAGCAGCTTTGGCAATCATCGTCTTGC CGGTCCCGGGTGGTCCGTAAAGGAGAAGACCTGCGGGTGGCTCAAGGCCC AAGCGACGAAACGCCTTTGGGCGGGCGAGAGGCCATGAAATCATTTCTTG GACGGCGATTTTGGCGGCCGTCAGTCCCCCTATATCGGACCAGCAGATAG GAGGGTCGACAGTCGACACAGCAGGGAGGCCTGCGCCGTGTGAGAGTTGC TTCCTTCGTTCTTCGGTGACTGAAGTTGCTAGTGCTGTGAGCCATGTCTG GCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGC AGCCGCAGGAACAGGAGCAGGAGCAGGAGAAAGATGCAGCAGCAGCGGTG GCAGCCGTGCTACTGATCTTGATATTGTTGCTGTGACTGCTGCTGCTGCT ACTGCTGTTACTGCTGTTGAGCTGCTGTACAACATACCTTCTTGCCCGTC GTGCTACAGCTGCAACCCCACCTAGGGTAAACCCTTGACAGCTTCGGGCC ACGTATTCCAAGTCATCTTGAGTGAGTGTATGCTTATCGGTGGCATGGTG ATGATGAGAGGCTAATGCATGTGCCTTTTCTTCATCCTCCTCTGGATGCT GCTGCTCCTTTGGATGCTGCTGCTCCTCTTCCTCCTCCCCGAACTCCCCT TCCTCTTCCTGCTTGCGAACGAATCCATCCTTGTTCTGGTCCTTGCCTCC TCGTCCTCCTTTATTTTCTTCTCCACCATGACACGGTGGCTGCTGCTGTT GCTGCTGTAGACACTGCTCCAAAACCCTCATCCGCGTCTGAATCCTTTCC TCCCCAGCACGGATACGCATTCTCCTGTCCCGTTTCACCCCTCCCTCCCC C back to topprotein sequence of NO27G00840.1 >NO27G00840.1-protein ID=NO27G00840.1-protein|Name=NO27G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=117bp MMAANYPSASTYGAVEDPRVHDRTALLKGTIQLTNETNELAAGIGENLRE QRTSLEDGSTRIREMKGFAGEARRLLNQMARRAACHRVTLWGIIVFLLVC IGLTVYRLLTNRGHII* back to top
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