NO27G00390, NO27G00390 (gene) Nannochloropsis oceanica

Overview
NameNO27G00390
Unique NameNO27G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5906
Alignment locationchr27:141356..147261 +

Link to JBrowse

Properties
Property NameValue
DescriptionNhl repeat containing 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:141356..147261 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013017NHL_repeat_subgr
IPR001258NHL_repeat
Homology
BLAST of NO27G00390 vs. NCBI_GenBank
Match: CEM38784.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 181.4 bits (459), Expect = 1.100e-41
Identity = 175/677 (25.85%), Postives = 273/677 (40.32%), Query Frame = 0
Query:  165 RGQALGLAGSMLVGTAGVMVAQRWRLLRRYTSPSAFSHPYDPQTIRRPFSIEQLRTAVTKALTKGLSA----XXXXXXXXXXXPFLRGSAASFK---EGEGKIILYHFWRPSNPDSLAVLCKLEALLSLYGTEELMAVSILSPKYDTEEDKETAEAALRKIECATG----QPLQQHAVLDRSLSMWKSKGLETWPSVAVALPGKQDKDGQRIIFLGARPPLSLPTHHGPSLLPSLPSLHLTLSSPGIXXXXXXXXXXXXXXRRGSGGWLCPLRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVAN--RRDPNFSDLSSQSAFAYPTGIA-ALPGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVS 828
            R   LG   + L G  G   A+RW L  R+ SP+A++ P D +T RR F+   +   V+ A+  G S                 +LRG  A  +   E   +++++HF+RPS  D +     + +L    G +++  V+I+SPK+  E++ + A+A+L K + A G     P +   V D  LS+WK  G++TWP+VA+A               GA   ++     G +   S+ +  L  +  G                 G  G   P                                                             PL FP  VA D  + R+++AD+G+HR++V D   G+ +R + G                          + +   AD    RI + + K  +     R  + P L      G +   +   +   +   G+    +  +G  R FR P+ +T +D+++YV A+GS QIW+ DP +  L P  G G     +  R       LS +  FA P GIA  + G L   ++ESS+IR +        +ST  G D LF  DLS FGDS G       Q P  LC +      L+DT NH+IK         ++    +  VS +AGSG RG+ DG  R+   +   GV+
Sbjct:  146 RNAILGATAASL-GLVGYGAARRWPLTGRFLSPAAWTRPLDSRTQRRYFTESDIDKVVSTAVASGFSGLPALPPSLIYESEQLKWLRGKPAMLRRAAEDAKRVLVFHFFRPSCVDCIGSFGVVSSLAERLG-DDVHVVTIVSPKFSGEQNPQAAKASLLKAQAAIGTRETDPSRHSVVFDGDLSLWKHIGVDTWPTVAIANAE------------GAIVAVNAGERAGATQFVSMCTERLIDAIRGKKTDRRREFAPIF----GVNGLSSP----------------------------------------------------PVSLPSTNQPLFFPMGVAVDTKSNRLFIADSGHHRVIVTD-LDGQFIRSIDGFHSXXXXXXXXXXXXXXXXXXXXXXLQLIDLAADNSKPRIILPEKKPDE-----RSNSKPNLANLFDPGAVVEDLQATLSANVAAAGEKVSRTKLIGQNRQFRAPMGVTTLDNFVYVTASGSNQIWKVDPSTESLYPAFGGGKKGREDIWRGGEEEYHLSDKVRFAQPVGIAGTVGGELYAVDSESSSIRRVTLLDNS--VSTAFGGDPLFRSDLSYFGDSTGLFGD--FQGPSFLCKIDTRQFYLADTLNHRIK--------KVSANFPSVGVSLVAGSGERGYADGPLREAMFDEPSGVA 734          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: PRW32604.1 (NHL repeat-containing 2 isoform B [Chlorella sorokiniana])

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-34
Identity = 116/350 (33.14%), Postives = 172/350 (49.14%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDD--YLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPG--RLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVSSSSE 832
            PL FP  VA D    R++++D+ N+R++V D   GK +  +G G PG  DG  EEA F+ PQG+A    R  LYVADT    +R VDL+ +  V TL             G  + GS +                  + GA +    P  L L  D   LY+A AG  QIWR D  +  LS   GSG      R     S L+  +A+A P+G+A  PG   + V+++ESS++R +D     + L  L+G D +FS +L  FGD DG      LQ P+ +         ++D+YNH++KVL            + A+++ +AGSGR G+KD +G   +     G+++  +
Sbjct:  613 PLRFPGKVATDLAGNRLFISDSSNNRIVVTD-LKGKFIEQIGCGAPGLVDGNFEEAAFHRPQGVAYSPKRNCLYVADTEAHALREVDLRKK-TVRTL------------AGSGVKGSDY---------------AGGQKGAAQLLNSPWDLALDSDEKSLYIAMAGQHQIWRMDTATGVLSNFSGSG----YERNQNGTSALT--TAWAQPSGLAMAPGGDAIYVADSESSSVRRLDLGSGGSRL--LVGGDPMFSDNLFRFGDKDGSGSDALLQHPLAVLTAPDGKVYVADSYNHRLKVL----------DPDTAAITTVAGSGRAGYKDDSGTAAQLSEPGGLAAGPD 915          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: PRW32602.1 (NHL repeat-containing 2 isoform C [Chlorella sorokiniana])

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-34
Identity = 116/350 (33.14%), Postives = 172/350 (49.14%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDD--YLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPG--RLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVSSSSE 832
            PL FP  VA D    R++++D+ N+R++V D   GK +  +G G PG  DG  EEA F+ PQG+A    R  LYVADT    +R VDL+ +  V TL             G  + GS +                  + GA +    P  L L  D   LY+A AG  QIWR D  +  LS   GSG      R     S L+  +A+A P+G+A  PG   + V+++ESS++R +D     + L  L+G D +FS +L  FGD DG      LQ P+ +         ++D+YNH++KVL            + A+++ +AGSGR G+KD +G   +     G+++  +
Sbjct:  656 PLRFPGKVATDLAGNRLFISDSSNNRIVVTD-LKGKFIEQIGCGAPGLVDGNFEEAAFHRPQGVAYSPKRNCLYVADTEAHALREVDLRKK-TVRTL------------AGSGVKGSDY---------------AGGQKGAAQLLNSPWDLALDSDEKSLYIAMAGQHQIWRMDTATGVLSNFSGSG----YERNQNGTSALT--TAWAQPSGLAMAPGGDAIYVADSESSSVRRLDLGSGGSRL--LVGGDPMFSDNLFRFGDKDGSGSDALLQHPLAVLTAPDGKVYVADSYNHRLKVL----------DPDTAAITTVAGSGRAGYKDDSGTAAQLSEPGGLAAGPD 958          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: PRW32603.1 (NHL repeat-containing 2 isoform A [Chlorella sorokiniana])

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-34
Identity = 116/350 (33.14%), Postives = 172/350 (49.14%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDD--YLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPG--RLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVSSSSE 832
            PL FP  VA D    R++++D+ N+R++V D   GK +  +G G PG  DG  EEA F+ PQG+A    R  LYVADT    +R VDL+ +  V TL             G  + GS +                  + GA +    P  L L  D   LY+A AG  QIWR D  +  LS   GSG      R     S L+  +A+A P+G+A  PG   + V+++ESS++R +D     + L  L+G D +FS +L  FGD DG      LQ P+ +         ++D+YNH++KVL            + A+++ +AGSGR G+KD +G   +     G+++  +
Sbjct:  648 PLRFPGKVATDLAGNRLFISDSSNNRIVVTD-LKGKFIEQIGCGAPGLVDGNFEEAAFHRPQGVAYSPKRNCLYVADTEAHALREVDLRKK-TVRTL------------AGSGVKGSDY---------------AGGQKGAAQLLNSPWDLALDSDEKSLYIAMAGQHQIWRMDTATGVLSNFSGSG----YERNQNGTSALT--TAWAQPSGLAMAPGGDAIYVADSESSSVRRLDLGSGGSRL--LVGGDPMFSDNLFRFGDKDGSGSDALLQHPLAVLTAPDGKVYVADSYNHRLKVL----------DPDTAAITTVAGSGRAGYKDDSGTAAQLSEPGGLAAGPD 950          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: WP_073069584.1 (hypothetical protein [Phormidesmis priestleyi] >PSB21735.1 hypothetical protein C7B65_03935 [Phormidesmis priestleyi ULC007])

HSP 1 Score: 157.1 bits (396), Expect = 2.300e-34
Identity = 115/347 (33.14%), Postives = 180/347 (51.87%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVSSSSEH 833
            PL FP +V AD+   R++VADT +HR+L+  +  G++L +VG G+PG  DG   E  F +PQG+ LD   Q+LY+ADT N  +R VDL  + AVST+           +  G  S +++    +ALE                +   P  L L+++ L+VA AGS QIWR +  +  ++  +G+GA       +     L++Q+AFA P+GI      L V+++E+S+IR I   +    +ST+ GS  L+      FGD DG   +VRLQ  +G+   + S   ++DTYNHKIK +                 + + G+G+ G +DG G   +     G+S++  H
Sbjct:  168 PLRFPGNVLADQERDRLFVADTRHHRILI-TTLNGEVLEIVGTGQPGLTDGKFSEVQFFAPQGMTLDRTTQILYIADTDNHLLRRVDLHQK-AVSTI-----------AGTGEQSHTIYPHGGKALE---------------ISLNSPWDLELVENCLFVAMAGSHQIWRMELENSTIATYIGNGA-------EGCVDGLTTQAAFAQPSGITIDQKNLFVADSETSSIRAISLGEM-PEVSTICGSGFLY-----GFGDIDGIGEAVRLQHCLGI-EFTNSLLWIADTYNHKIKTVTLDGI-----------CTTILGTGKAGHQDGEGLNSQFFEPSGLSATQTH 461          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: OOP56888.1 (hypothetical protein AYP45_06695 [Candidatus Brocadia caroliniensis])

HSP 1 Score: 156.0 bits (393), Expect = 5.100e-34
Identity = 118/344 (34.30%), Postives = 171/344 (49.71%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVSSS 830
            PL FP  V ADE + R+++AD+G++R+++  +  G++L + G GK G  DG   EA FN PQG+AL      LYVADT N  IR +DLK++  V T+          AS G  IS  ++                            P  L  ++  LY+A AG+ QIW  D  +    P  G+G      R D +F     ++A A P+GI     RL  +++E S+IR  D  ++E  + T++G      KDL  FGD DG    VRLQ P+G+C  S     ++DTYNHKIKVL        N Q +       +G+G+ G+ DG   +    GG+ VS++
Sbjct:  207 PLSFPGKVLADEASNRLFIADSGHNRIVI-TNLEGEVLDIAGKGKTGTSDGAYPEACFNHPQGMALH--GDTLYVADTENHLIRKLDLKAK-TVKTIAGTGKQAEFMASGGMGISSPLNS---------------------------PWDLVYLEGQLYIAMAGAHQIWVMDLETTVFQPFAGNGR---EGRVDSSF----DKAALAQPSGITISGTRLYFADSEVSSIRYADIEKKE--VKTIVG------KDLFVFGDVDGQGDEVRLQHPLGVCNHS-GLLYIADTYNHKIKVL--------NPQDKTCRT--FSGNGKPGYTDGKEAQFYEPGGLSVSNN 493          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: WP_006106155.1 (hypothetical protein [Coleofasciculus chthonoplastes] >EDX71059.1 Redoxin family [Coleofasciculus chthonoplastes PCC 7420])

HSP 1 Score: 155.2 bits (391), Expect = 8.800e-34
Identity = 113/343 (32.94%), Postives = 173/343 (50.44%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVSS 829
            PL FP  V ADE + R+++AD+G+HR+LV  + TG++L ++G G+PG  DG   EA F +PQG+ LD   Q LYVADT N  +R + L+++                     TI+G+          E+ +  +    LG + A   P  + ++D+ L +A AGS QIW     + ++    G+GA A             +++AFA P+GI +    L V+++E S+IR +       P+ T+ GS  LF      FGD DG+   VRLQ  +G+   + +   ++DTYNHKIK  V P+           S   L G+G+ G +DG   + E     GVS+
Sbjct:  173 PLAFPGKVLADEFSDRLFIADSGHHRILV-STLTGEVLNIIGTGEPGLTDGTFAEAQFFAPQGITLDPDNQRLYVADTDNHCLRCIHLETKQV------------------ETIAGT---------GEQSRQIQPHSGLGLQTALNSPWDIEIIDNRLLIAMAGSHQIWEMQLETGEIGTYAGTGAEAC-------LDGSLNEAAFAQPSGITSDGRELYVADSEVSSIRGVGL-INNLPVRTICGSGELFE-----FGDRDGHKSEVRLQHCLGV-EYTQNYLWVADTYNHKIK-RVDPT---------TGSCQTLLGNGKAGHRDGQSHEAEFAEPSGVSA 463          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: PSS28872.1 (NHL repeat-containing protein, partial [Actinidia chinensis var. chinensis])

HSP 1 Score: 154.5 bits (389), Expect = 1.500e-33
Identity = 110/331 (33.23%), Postives = 164/331 (49.55%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQS-AFAYPTGIAALPG--RLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDG 814
            PL FP  +A D +N R++++D+ ++R++V D     IL++   G+ GF+DG  EEA FN PQGLA +  R +LYVADT N  +R++D  + + V TL           ++G    G   D  +  L     D    P                +++ +Y+A AG  QIW  +          G G        + N + LSS S +FA P+GI+  P      ++++ESS+IR +D +   + L  L G D +FS +L  FGD DG    V LQ P+G+         ++D+YNHKIK L             +  VS LAG+G+ GFKDG
Sbjct:  461 PLKFPGKLAVDVLNNRLFISDSNHNRIVVTDLDGNFILQIGSTGEEGFRDGNFEEASFNRPQGLAYNAKRNVLYVADTENHALRVIDFVN-EMVRTL-------AGNGAKGSDYKGGGKDTAQ--LLNSPWDVCFEP----------------VNETVYIAMAGQHQIWEHNTSDGVTKAFSGDG-------YERNLNGLSSTSTSFAQPSGISLSPDLKEAYIADSESSSIRALDLKTGGSRL--LAGGDLVFSDNLFRFGDHDGAGSEVLLQHPLGVLCGKDGQVYIADSYNHKIKKL----------DPASKRVSTLAGTGKAGFKDG 746          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: WP_063718332.1 (hypothetical protein [Leptolyngbya valderiana] >OAB58411.1 hypothetical protein AY599_22935 [Leptolyngbya valderiana BDU 20041])

HSP 1 Score: 153.7 bits (387), Expect = 2.500e-33
Identity = 146/528 (27.65%), Postives = 209/528 (39.58%), Query Frame = 0
Query:  258 GKIILYHFWRPSNPDSLAVLCKLEALLSLYGTEELMAVSILSPKYDTEEDKETAEAALRKIECATGQPLQQHAVLDRSLSMWKSKGLETWPSVAVALPGKQDKDGQRIIFLGARPPLSLPTHHGPSLLPSLPSLHLTLSSPGIXXXXXXXXXXXXXXRRGSGGWLCPLRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAP 786
            G+++L HFW     + L VL  L  L + YG + L+ +S+ SPK+ TE+ + +   A+R+ +      +    VLD  LS+W+   +  WP+  +      D  G  +         +L   H   L  ++ SL  T +SP                         PL+                                                           PL FPS V A      +Y+ADTG+HRL+V  +  G++L  VG G PGF DG    A FN PQGLA DL +  LY+ADT N  IR +D + R  VST+                                             R    P  +  + D L++A AGS QIW  D     L    G+GA       +  F      +AFA P+G+A     L V+++E S++R +     +A + TL GS  LF      FGD DG   +VRLQ  +G+ A    +  L+DTYNHKIK +  P
Sbjct:   34 GRVVLLHFWTHGCINCLQVLPDLAYLETKYG-DRLLIISVHSPKFATEKTETSLRQAVRRYD------ITHPVVLDADLSVWEQYAVRAWPTCVLV-----DSRGYDV-------GRALGEGHRDELDGAIASLLDTAASPENP---------------------IPLQ-------------------------------------------------LEKQSRPHRQPLAFPSKVLATP--DAIYIADTGHHRLVVV-TAEGELLETVGSGTPGFADGEFANAQFNRPQGLAFDLAKSCLYLADTANHAIRCLDFRRR-CVSTV--------------------------------------------SRELNSPWDVEFLSDILFIAMAGSHQIWAIDLDDNTLGLYAGTGA-------EGCFDGSLDDAAFAQPSGLATDGDILYVADSEISSVRSVGL-DADAEVRTLCGSGGLFD-----FGDRDGIGEAVRLQHCLGI-AYGRETLYLADTYNHKIKRVRLP 410          
BLAST of NO27G00390 vs. NCBI_GenBank
Match: XP_024360903.1 (protein SUPPRESSOR OF QUENCHING 1, chloroplastic-like [Physcomitrella patens] >PNR30849.1 hypothetical protein PHYPA_027165 [Physcomitrella patens])

HSP 1 Score: 153.3 bits (386), Expect = 3.300e-33
Identity = 110/344 (31.98%), Postives = 168/344 (48.84%), Query Frame = 0
Query:  486 PLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPG--RLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGRKGEREGGMGVS 828
            PL FP  +  D +NGR++++D+ +HR++V D   G  +  VGGG  G KDG  E +LFN PQG+A +  + +LYVADT N  +R +DL +++ V TL             G  I GS +   ++   +    P               V       ++Y+A AG  QIWR +          G G       R+ N       +++A P+GI+  P    + ++++ESS+IR +D     + L  L G D  FS +L  FGD DG   + +LQ P+G+   S     ++D+YNHKIKVL                V+ LAG+G  GFKDG  ++G+     G++
Sbjct:  591 PLKFPGKLTTDLVNGRLFISDSNHHRIVVTD-LDGNFIVNVGGGGEGLKDGSFETSLFNRPQGVAYNAFKNVLYVADTENHALREIDL-AKETVRTL------------AGNGIKGSDYRGGKKGSAQVLNSP-------------WDVAHDAEGGFVYIAMAGQHQIWRYNIADGRAEVFSGDG-----YERNQN-GKRGKDTSYAQPSGISFTPDFKYMYLADSESSSIRRVDMTTGGSKL--LAGGDPTFSDNLFQFGDRDGVGSNAQLQHPLGVLYSSEGLVYVADSYNHKIKVL----------NPSTQKVTTLAGTGTAGFKDGTAQEGQLSEPAGIA 889          
The following BLAST results are available for this feature:
BLAST of NO27G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEM38784.11.100e-4125.85unnamed protein product [Vitrella brassicaformis C... [more]
PRW32604.11.400e-3433.14NHL repeat-containing 2 isoform B [Chlorella sorok... [more]
PRW32602.11.400e-3433.14NHL repeat-containing 2 isoform C [Chlorella sorok... [more]
PRW32603.11.400e-3433.14NHL repeat-containing 2 isoform A [Chlorella sorok... [more]
WP_073069584.12.300e-3433.14hypothetical protein [Phormidesmis priestleyi] >PS... [more]
OOP56888.15.100e-3434.30hypothetical protein AYP45_06695 [Candidatus Broca... [more]
WP_006106155.18.800e-3432.94hypothetical protein [Coleofasciculus chthonoplast... [more]
PSS28872.11.500e-3333.23NHL repeat-containing protein, partial [Actinidia ... [more]
WP_063718332.12.500e-3327.65hypothetical protein [Leptolyngbya valderiana] >OA... [more]
XP_024360903.13.300e-3331.98protein SUPPRESSOR OF QUENCHING 1, chloroplastic-l... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR063ncniR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005029NSK005029Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00390.1NO27G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G00390.2NO27G00390.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633780gene_10145Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_102995g1gene9368Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00390.1NO27G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G00390.2NO27G00390.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00390 ID=NO27G00390|Name=NO27G00390|organism=Nannochloropsis oceanica|type=gene|length=5906bp
ATGATGCCAGCCCGGATAAAAGGACCCCCACAACTTGACCTCCTCGTCCT
CCTCGTCCTCCTTTTCCCAGCCTTCGCATCTGgtacattattttgataca
tcgatcctctccctccctctttccctctctgtcttccatcccctccctgt
caccagaaccatatctagacctccctaataatcatgcctctgagatcggc
acttgcctcgctcccacccttcccctgatcttaccctcctccctcccttc
ccacatcgtacgacacatagCGTTTGTCCGCTCCCCCTCCCCCTCCATTC
CCGGCCCTTCCCGCCATGCCTCCCTCGCTTCTTCTCCCTCCCTCCCACTT
TCCTTCCTCCTCGAACTTTCTCCTGCCTCTTCTGCCCCTGTCACCTTCAC
CGCTCTTCACGCTGTGGTTGGCACGGGAGGGGGCAGTCGGCGGAGGGGGA
GGGGAGGAAGGGGGAGAGGAAGGGGGGATGACGACGACGGACGCCCGTTC
AACATGAGCAGTGATGAGgtaagttcaatgaaggagagacagctaagcca
ggacggaaggaaggaaagaaggaaggaaggaagggaggaaggaaggaagg
gaggaaggaagggagggagggagggagggatggagggaggggcaacgtct
gagaagtagatgcgtcaaatggtcagactcagccttccctccctcccttt
ttcttcccccttccctccctttcaccctagAATTACGAAGAGTTTTTCCG
GCAACGTGAAGAGAAACGGACGTTGCAGTACGACCAACAGATCGAGGCCG
CCTACTACGAAGGCGCCGACAAAAACGTCAAgtacgtgccctccctcact
ccctccctcattcccttcctgcccttcgctcccttcctcttcatcgccac
agacttcccgagactgtcactctcacgcccacatttctcatccccccccc
cttccctccttccctccttccctccctccctagATTCCTTAGGGACGACC
CGAATGCCTGGGATGGCACTCCCGACACTTTTACCTCCTTCTCGCGAGGG
CAGGCGCTGGGGTTGGCGGGGAGCATGCTGGTGGGGACGGCGGGCGTGAT
GGTCGCCCAGgtagggagggagggagggagggagggcgggagggagggag
ggagggcgggtggtgcctgttcatgacgaggacaggcgctgttgccgtgt
tggcgatcggtgtgatcgggagggaagaagggtgtttagcagtagcagca
gtagcagcaacaacagcagcagcagcaacagtcccgtccactcaccactc
ttccccccctccgtccctccctccctccctccgtccctccctcctgccac
agCGCTGGCGCCTCCTAAGGCGGTATACCTCCCCCTCGGCCTTTTCCCAT
CCCTACGACCCCCAGACTATCCGCCGACCGTTTAGCATCGAGCAGTTGAG
GACAGCCGTTACCAAGGCGTTGACCAAGGGGCTAAGgtaggtcttcatcc
cctccctccctccctccctccttccctccttccttgtaaaagccatgttt
cgtctttcttttcccctccctcccccccccccctcctgctcactctcctc
cttctccccctcacaaccctcctccccaataccccccacacagTGCCCTC
CCTTCCGCTCCCTCCCTCCCTCCCTCCCTCCCCTTCCTCCGCGGCTCCGC
TGCCTCGTTCAAGGAAGGAGAAGGCAAAATTATCCTCTACCATTTCTGGC
GGCCGAGCAAgtaagttccctccctccctccctccctccctccctccctt
cttctctccccatcactcgtctctccggccactctcctaccacacgcacg
acgcccttttctccctcctcaccccttttccctcccctcgatcctcccct
ccctccccccctccccagCCCCGACTCCCTTGCCGTGCTCTGCAAGCTCG
AGGCCCTCCTCTCTCTCTACGGCACTGAAGAGCTGATGGCCGTTTCGATC
CTCTCACCCAAATATGACACGGAAGAGGACAAAGAAACGGCCGAAGCCGC
CCTCAGAAAAATCGAGgtaaacttgccttctcttccctccctccctccct
ccgttccctccctctctcctttcgctccctcgctcccttcctccctccct
tccttccttcctcgccccctccctctacgcactctccctccctccctccc
tccctccctccctccccagTGTGCCACGGGCCAGCCGTTACAGCAGCACG
CGGTCCTCGACCGCTCTCTCTCCATGTGGAAGAGCAAGGGCCTGGAAACC
TGGCCCTCCGTCGCCGTGGCTCTCCCGGGAAAACAAGATAAGGACGGACA
GCGCATTATCTTCCTCGGTGCGCGCCCCCCCCTTTCCCTACCGACCCACC
ATGGCCCCTCCCTCCTTCCCTCCCTCCCTTCCCTCCACCTCACCTTGAGC
TCACCAGGTATCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
CAGCCGCAGGGGATCGGGTGGCTGGCTCTGCCCTCTTAGAAAAAGCCGTC
GCCGCCGTCCTGGAGGTCGTCAAAGGGAAAGAAGAAGCTCGCGAATACGC
CCCCCTCTTCCCCCTCCCCCCTCCCTCTCTCTCTTTTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTTCTCCTCCCCTTCGCCGCTCCTCTTTCCATCGGACGTGGCAGCTGAT
GAGATTAATGGAAGAGTCTACGTCGCCGATACGGGgtatgccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctctct
ctatccagtgagtacaaattcattttccctcctccctccctccctccctt
cctctttcccttcctccctccctctcacaagCAACCACCGCCTTTTGGTC
TGCGACTCGACCACTGGAAAGATTCTTCGAGTGGTGGGTGGAGGCAAGCC
AGGATTCAAGGACGGATATCAAGAGGAGGCGCTCTTCAACAGTCCACAGg
tagggagggagggagggagggaaggagggagggagggagagaagggtggg
aatatactatcacatcaagctattataaatcaaccttaatttcgggtgat
aattgctctacgtgcatgccgacagacacttacatcgttctccctcctgc
cctccctccctccctccctccctccctccctgacagctgctctcctgaaa
acaactaacaccatcccccctcccttcctccccccccccctccctcagGG
CCTCGCCCTCGACCTCGGGCGACAGCTGCTTTACGTTGCTGACACGTACA
ACGATCGTATCCGCATCGTGGATCTTAAATCCAGAGACGCCGTGTCCACC
CTCCGACCTGCCAACGCCCCGCCCTTGAACAAGgtactaagcccctccct
tcctccctcccgccctcccgccctccctccctccctccctccctccctcc
ctctctccctcctatctcttctgcccgttgggttctttatacatccttga
ccgcctcccgtttcctttcttccctccctccctccctccctcccgccctc
cctccctccctctctcccaccctctctccccccctccttcccagGCATCT
CGGGGCGGTACGATAAGCGGGAGTGTGCATGACGATATTCGACGAGCTCT
GGAAGAGGAAGgtacgcccccccctccttccctccttccttcccttcctt
cgccctccttccgtatgcacaccatccctccagctccccttccctccctc
cttccctccctctctttctcccgcaccttcccatccatcccacaccctcc
ctccctccctcattccctccctccctccctcattccctcctcaagGCAAA
GACCCTCGCCTTTCCCCGGAGCTCGGCGCCCGTCGGGCTTTTCGTCTTCC
CGTCCAACTGACATTGATGGATGACTACCTCTATGTGGCCGCCGCAGGGT
CACAGCAGgtccctccctctctccctccctccctccctccctccctctgt
ccctccctccccccgcccctcctttcgatttcccactcttccgtcgattc
gtcctccctccctccctccctccctccctccgagactgcctccctccctc
cctcccctttcccttcgtgtctctctccctccctccctccctccctccct
ccgagactgcctccctccctcccttcccccacacttaggccaagcctccc
tccctccctccctccctccctccctccctccctccctccctccctccgtc
actagATATGGCGTGCTGACCCCTATTCATTCGATCTTTCCCCTCTTCTT
GGGAGCGGCGCTTGTGCCGTAGCCAACCGACGCGACCCGAACTTTTCTGA
Tgtagggagggagggagggagggagggagggagagagggagggagggagg
agggagggagggagcaaatgagggaggaaggatggggaattgagaagaca
cgaggtagggagggagggagagtgggtgtgaaaaattattttgcgtggac
tcgtcctgaactgccttccctccctccctccctccctccctccctccctc
cctccctcccatcctccctccctccctttgtcagCTCTCCTCCCAATCCG
CCTTCGCCTACCCCACGGGCATCGCAGCTCTTCCAGGAAGGCTTCTAGTC
AGCGAAGCCGAGTCGAGCACCATTCGGGAGgtatgccctccctccttccc
tccctccctccgtacctctctccgtccctccctccctccctccctccctc
cctccttcggatgcctctttcaacgcccatacgggatgctctcaggaacc
actcccattcccacaacctctccctccctccctccttccctccctccagA
TCGACTTCCGGCAACGCGAGGCCCCCCTCAGCACCCTCCTGGGCAGCGAT
CGTCTTTTCTCGAAGGATTTAAGCGCTTTTGGGGACAGTGATGGATACGC
CCACTCCGTCCGTCTGCAATGTCCCATGGGACTGTGTGCCCTCTCAGgca
cgtctcgtctacccctccctccctcccttcctcccccgctccctgctcgc
ctctttcacacccttggagataacccgaatgcctctagctgaccctttct
ttctccctccctccctccctccctccctcccccgttccctccagCCTCCT
CTGCCCTCCTCTCCGACACTTACAACCATAAGATTAAGGTCTTGGTTGCC
CCCTCCGCACTGGCCATCAATGAGCAGGCAGAAGCCGCCTCTGTGTCTCG
TCTCGCTGGGAGTGGGAGGAGAGGGTTCAAAGACGGAGCTGgtaggaagg
gagagagggagggagggatgggtgtttcttcttcctctgaacacgaatga
attagcgggcacgaggttcctcggattgtctcagcaacaaggacaccagt
cagtcacaccctcccttcttccctcccttcctccctccttccttctttcc
cctaggcgctacggcacaattcgacaatccgcacaaagtgtgcaacgacg
ccagtcactcacatcctccctccctccgtccctctctcctttccttcctc
cctcccctctttcccccagGCGCCACAGCGCAATTCGACGAGCCGCGCGG
GCTGTGCGTCCAAGAGAAGCGGGGCCGGGCCTTGGTATGCGACACCAACA
ATCACGCCATTCGCACCGTTGACTTAACAACAGGGGACGTGGGGACATGG
ACTGTGATAGAGGGCAGTGTATAATAATACGGACAATCGGAGGGAGGGAA
ATAATTGATTTAATTTGAGGAAAAGGGATTGGACAATGCGTGCAAGTAAT
GACAAAAGAAAAAGAGAAAATAATCAAAACATTGGAGGCAGTGACATTGA
ACAGAT
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protein sequence of NO27G00390.1

>NO27G00390.1-protein ID=NO27G00390.1-protein|Name=NO27G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=866bp
MMPARIKGPPQLDLLVLLVLLFPAFASAFVRSPSPSIPGPSRHASLASSP
SLPLSFLLELSPASSAPVTFTALHAVVGTGGGSRRRGRGGRGRGRGDDDD
GRPFNMSSDENYEEFFRQREEKRTLQYDQQIEAAYYEGADKNVKFLRDDP
NAWDGTPDTFTSFSRGQALGLAGSMLVGTAGVMVAQRWRLLRRYTSPSAF
SHPYDPQTIRRPFSIEQLRTAVTKALTKGLSALPSAPSLPPSLPFLRGSA
ASFKEGEGKIILYHFWRPSNPDSLAVLCKLEALLSLYGTEELMAVSILSP
KYDTEEDKETAEAALRKIECATGQPLQQHAVLDRSLSMWKSKGLETWPSV
AVALPGKQDKDGQRIIFLGARPPLSLPTHHGPSLLPSLPSLHLTLSSPGI
PPSLPPSLPPSLPSRRGSGGWLCPLRKSRRRRPGGRQRERRSSRIRPPLP
PPPSLSLFSSSSSSSSSSSSSSSSSSSSSSFSSPSPLLFPSDVAADEING
RVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLA
LDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTIS
GSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGS
QQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAAL
PGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYA
HSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVS
RLAGSGRRGFKDGAGATAQFDEPRGLCVQEKRGRALVCDTNNHAIRTVDL
TTGDVGTWTVIEGSV*
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protein sequence of NO27G00390.2

>NO27G00390.2-protein ID=NO27G00390.2-protein|Name=NO27G00390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=834bp
MMPARIKGPPQLDLLVLLVLLFPAFASAFVRSPSPSIPGPSRHASLASSP
SLPLSFLLELSPASSAPVTFTALHAVVGTGGGSRRRGRGGRGRGRGDDDD
GRPFNMSSDENYEEFFRQREEKRTLQYDQQIEAAYYEGADKNVKFLRDDP
NAWDGTPDTFTSFSRGQALGLAGSMLVGTAGVMVAQRWRLLRRYTSPSAF
SHPYDPQTIRRPFSIEQLRTAVTKALTKGLSALPSAPSLPPSLPFLRGSA
ASFKEGEGKIILYHFWRPSNPDSLAVLCKLEALLSLYGTEELMAVSILSP
KYDTEEDKETAEAALRKIECATGQPLQQHAVLDRSLSMWKSKGLETWPSV
AVALPGKQDKDGQRIIFLGARPPLSLPTHHGPSLLPSLPSLHLTLSSPGI
PPSLPPSLPPSLPSRRGSGGWLCPLRKSRRRRPGGRQRERRSSRIRPPLP
PPPSLSLFSSSSSSSSSSSSSSSSSSSSSSFSSPSPLLFPSDVAADEING
RVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLA
LDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTIS
GSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGS
QQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAAL
PGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYA
HSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVS
RLAGSGRRGFKDGAGRKGEREGGMGVSSSSEHE*
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Synonyms
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