NO27G00390.1, NO27G00390.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00390.1
Unique Name	NO27G00390.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2730
Alignment location	chr27:141356..147261 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:141356..147261 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G00390.1 vs.
Match: PSC68676.1 (NHL repeat-containing 2 [Micractinium conductrix])

HSP 1 Score: 192.6 bits (488), Expect = 5.100e-45
Identity = 136/377 (36.07%), Postives = 187/377 (49.60%), Query Frame = 0

Query:  485 SPLLFPSDVAADEINGRVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLALDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTISGSVHDDIRRALEEEGKDPRLSPELGARRAFRLP--VQLTLMDDYLYVAAAGSQQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAALPG--RLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYAHSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVSRLAGSGRRGFKDGAGATAQFDEPRGLCVQEKRGRALVCDTNNHAIRTVDLTTGDVGT 858
            SPL FP  +A D + G ++++D+ N+RL++ D   G+ L  VG G PG  DG   EA F+ PQG+A    +  LYVADT +  +R VDL+ R AV+TL             G  + GS +                    GA +    P  V L   D Y+YVA AG  QIWR D  +       GSG     N   P        +A+A P+G+A  PG   L V+++ESST+R++D R   +    L+G D LFS +L  FGD DG      LQ P+ +         ++D+YNH++K+L              +++  LAGSG  G+ DGAGA AQ  EP GL +    G  LV DTNN  IR  D  TG++ T
Sbjct:  595 SPLRFPGKLATDLVGGWLFISDSSNNRLVITD-LEGRFLEAVGCGAPGLADGSYAEAAFHRPQGVAYSAKQDCLYVADTESHALRRVDLR-RKAVTTL------------AGNGVKGSDY---------------AGGASGAAQLLNSPWDVALDSTDRYVYVAMAGQHQIWRHDTVTGVTENFSGSGYERNQNGATP------LTTAWAQPSGLALAPGGDALYVADSESSTVRQLDLRTGGS--QALVGGDPLFSDNLFRFGDKDGSGSDALLQHPLAVLTAPDGKVYVADSYNHRLKLL----------DPSTSTLRTLAGSGGAGYADGAGAAAQLSEPGGLAL-GPNGTVLVADTNNSLIRRFDPRTGNLFT 923

The following BLAST results are available for this feature:

BLAST of NO27G00390.1 vs.

BLAST of NO27G00390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
PSC68676.1	5.100e-45	36.07	NHL repeat-containing 2 [Micractinium conductrix]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00390	NO27G00390	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00390.1	NO27G00390.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00390.1.cds1	NO27G00390.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds2	NO27G00390.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds3	NO27G00390.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds4	NO27G00390.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds5	NO27G00390.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds6	NO27G00390.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds7	NO27G00390.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds8	NO27G00390.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds9	NO27G00390.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds10	NO27G00390.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds11	NO27G00390.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds12	NO27G00390.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds13	NO27G00390.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds14	NO27G00390.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds15	NO27G00390.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds16	NO27G00390.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00390.1.cds17	NO27G00390.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:141356..147261+
coding sequence from alignment at chr27:141356..147261+

mRNA sequence

>NO27G00390.1 ID=NO27G00390.1|Name=NO27G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=2730bp
ATGATGCCAGCCCGGATAAAAGGACCCCCACAACTTGACCTCCTCGTCCT
CCTCGTCCTCCTTTTCCCAGCCTTCGCATCTGCGTTTGTCCGCTCCCCCT
CCCCCTCCATTCCCGGCCCTTCCCGCCATGCCTCCCTCGCTTCTTCTCCC
TCCCTCCCACTTTCCTTCCTCCTCGAACTTTCTCCTGCCTCTTCTGCCCC
TGTCACCTTCACCGCTCTTCACGCTGTGGTTGGCACGGGAGGGGGCAGTC
GGCGGAGGGGGAGGGGAGGAAGGGGGAGAGGAAGGGGGGATGACGACGAC
GGACGCCCGTTCAACATGAGCAGTGATGAGAATTACGAAGAGTTTTTCCG
GCAACGTGAAGAGAAACGGACGTTGCAGTACGACCAACAGATCGAGGCCG
CCTACTACGAAGGCGCCGACAAAAACGTCAAATTCCTTAGGGACGACCCG
AATGCCTGGGATGGCACTCCCGACACTTTTACCTCCTTCTCGCGAGGGCA
GGCGCTGGGGTTGGCGGGGAGCATGCTGGTGGGGACGGCGGGCGTGATGG
TCGCCCAGCGCTGGCGCCTCCTAAGGCGGTATACCTCCCCCTCGGCCTTT
TCCCATCCCTACGACCCCCAGACTATCCGCCGACCGTTTAGCATCGAGCA
GTTGAGGACAGCCGTTACCAAGGCGTTGACCAAGGGGCTAAGTGCCCTCC
CTTCCGCTCCCTCCCTCCCTCCCTCCCTCCCCTTCCTCCGCGGCTCCGCT
GCCTCGTTCAAGGAAGGAGAAGGCAAAATTATCCTCTACCATTTCTGGCG
GCCGAGCAACCCCGACTCCCTTGCCGTGCTCTGCAAGCTCGAGGCCCTCC
TCTCTCTCTACGGCACTGAAGAGCTGATGGCCGTTTCGATCCTCTCACCC
AAATATGACACGGAAGAGGACAAAGAAACGGCCGAAGCCGCCCTCAGAAA
AATCGAGTGTGCCACGGGCCAGCCGTTACAGCAGCACGCGGTCCTCGACC
GCTCTCTCTCCATGTGGAAGAGCAAGGGCCTGGAAACCTGGCCCTCCGTC
GCCGTGGCTCTCCCGGGAAAACAAGATAAGGACGGACAGCGCATTATCTT
CCTCGGTGCGCGCCCCCCCCTTTCCCTACCGACCCACCATGGCCCCTCCC
TCCTTCCCTCCCTCCCTTCCCTCCACCTCACCTTGAGCTCACCAGGTATC
CCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGCCGCAGGGG
ATCGGGTGGCTGGCTCTGCCCTCTTAGAAAAAGCCGTCGCCGCCGTCCTG
GAGGTCGTCAAAGGGAAAGAAGAAGCTCGCGAATACGCCCCCCTCTTCCC
CCTCCCCCCTCCCTCTCTCTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCC
CTTCGCCGCTCCTCTTTCCATCGGACGTGGCAGCTGATGAGATTAATGGA
AGAGTCTACGTCGCCGATACGGGCAACCACCGCCTTTTGGTCTGCGACTC
GACCACTGGAAAGATTCTTCGAGTGGTGGGTGGAGGCAAGCCAGGATTCA
AGGACGGATATCAAGAGGAGGCGCTCTTCAACAGTCCACAGGGCCTCGCC
CTCGACCTCGGGCGACAGCTGCTTTACGTTGCTGACACGTACAACGATCG
TATCCGCATCGTGGATCTTAAATCCAGAGACGCCGTGTCCACCCTCCGAC
CTGCCAACGCCCCGCCCTTGAACAAGGCATCTCGGGGCGGTACGATAAGC
GGGAGTGTGCATGACGATATTCGACGAGCTCTGGAAGAGGAAGGCAAAGA
CCCTCGCCTTTCCCCGGAGCTCGGCGCCCGTCGGGCTTTTCGTCTTCCCG
TCCAACTGACATTGATGGATGACTACCTCTATGTGGCCGCCGCAGGGTCA
CAGCAGATATGGCGTGCTGACCCCTATTCATTCGATCTTTCCCCTCTTCT
TGGGAGCGGCGCTTGTGCCGTAGCCAACCGACGCGACCCGAACTTTTCTG
ATCTCTCCTCCCAATCCGCCTTCGCCTACCCCACGGGCATCGCAGCTCTT
CCAGGAAGGCTTCTAGTCAGCGAAGCCGAGTCGAGCACCATTCGGGAGAT
CGACTTCCGGCAACGCGAGGCCCCCCTCAGCACCCTCCTGGGCAGCGATC
GTCTTTTCTCGAAGGATTTAAGCGCTTTTGGGGACAGTGATGGATACGCC
CACTCCGTCCGTCTGCAATGTCCCATGGGACTGTGTGCCCTCTCAGCCTC
CTCTGCCCTCCTCTCCGACACTTACAACCATAAGATTAAGGTCTTGGTTG
CCCCCTCCGCACTGGCCATCAATGAGCAGGCAGAAGCCGCCTCTGTGTCT
CGTCTCGCTGGGAGTGGGAGGAGAGGGTTCAAAGACGGAGCTGGCGCCAC
AGCGCAATTCGACGAGCCGCGCGGGCTGTGCGTCCAAGAGAAGCGGGGCC
GGGCCTTGGTATGCGACACCAACAATCACGCCATTCGCACCGTTGACTTA
ACAACAGGGGACGTGGGGACATGGACTGTGATAGAGGGCAGTGTATAATA
ATACGGACAATCGGAGGGAGGGAAATAATTGATTTAATTTGAGGAAAAGG
GATTGGACAATGCGTGCAAGTAATGACAAAAGAAAAAGAGAAAATAATCA
AAACATTGGAGGCAGTGACATTGAACAGAT

protein sequence of NO27G00390.1

>NO27G00390.1-protein ID=NO27G00390.1-protein|Name=NO27G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=866bp
MMPARIKGPPQLDLLVLLVLLFPAFASAFVRSPSPSIPGPSRHASLASSP
SLPLSFLLELSPASSAPVTFTALHAVVGTGGGSRRRGRGGRGRGRGDDDD
GRPFNMSSDENYEEFFRQREEKRTLQYDQQIEAAYYEGADKNVKFLRDDP
NAWDGTPDTFTSFSRGQALGLAGSMLVGTAGVMVAQRWRLLRRYTSPSAF
SHPYDPQTIRRPFSIEQLRTAVTKALTKGLSALPSAPSLPPSLPFLRGSA
ASFKEGEGKIILYHFWRPSNPDSLAVLCKLEALLSLYGTEELMAVSILSP
KYDTEEDKETAEAALRKIECATGQPLQQHAVLDRSLSMWKSKGLETWPSV
AVALPGKQDKDGQRIIFLGARPPLSLPTHHGPSLLPSLPSLHLTLSSPGI
PPSLPPSLPPSLPSRRGSGGWLCPLRKSRRRRPGGRQRERRSSRIRPPLP
PPPSLSLFSSSSSSSSSSSSSSSSSSSSSSFSSPSPLLFPSDVAADEING
RVYVADTGNHRLLVCDSTTGKILRVVGGGKPGFKDGYQEEALFNSPQGLA
LDLGRQLLYVADTYNDRIRIVDLKSRDAVSTLRPANAPPLNKASRGGTIS
GSVHDDIRRALEEEGKDPRLSPELGARRAFRLPVQLTLMDDYLYVAAAGS
QQIWRADPYSFDLSPLLGSGACAVANRRDPNFSDLSSQSAFAYPTGIAAL
PGRLLVSEAESSTIREIDFRQREAPLSTLLGSDRLFSKDLSAFGDSDGYA
HSVRLQCPMGLCALSASSALLSDTYNHKIKVLVAPSALAINEQAEAASVS
RLAGSGRRGFKDGAGATAQFDEPRGLCVQEKRGRALVCDTNNHAIRTVDL
TTGDVGTWTVIEGSV*

mRNA from alignment at chr27:141356..147261+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00390.1 ID=NO27G00390.1|Name=NO27G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=5906bp|location=Sequence derived from alignment at chr27:141356..147261+ (Nannochloropsis oceanica)
ATGATGCCAGCCCGGATAAAAGGACCCCCACAACTTGACCTCCTCGTCCT
CCTCGTCCTCCTTTTCCCAGCCTTCGCATCTGGTACATTATTTTGATACA
TCGATCCTCTCCCTCCCTCTTTCCCTCTCTGTCTTCCATCCCCTCCCTGT
CACCAGAACCATATCTAGACCTCCCTAATAATCATGCCTCTGAGATCGGC
ACTTGCCTCGCTCCCACCCTTCCCCTGATCTTACCCTCCTCCCTCCCTTC
CCACATCGTACGACACATAGCGTTTGTCCGCTCCCCCTCCCCCTCCATTC
CCGGCCCTTCCCGCCATGCCTCCCTCGCTTCTTCTCCCTCCCTCCCACTT
TCCTTCCTCCTCGAACTTTCTCCTGCCTCTTCTGCCCCTGTCACCTTCAC
CGCTCTTCACGCTGTGGTTGGCACGGGAGGGGGCAGTCGGCGGAGGGGGA
GGGGAGGAAGGGGGAGAGGAAGGGGGGATGACGACGACGGACGCCCGTTC
AACATGAGCAGTGATGAGGTAAGTTCAATGAAGGAGAGACAGCTAAGCCA
GGACGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGGAGGAAGGAAGGAAGG
GAGGAAGGAAGGGAGGGAGGGAGGGAGGGATGGAGGGAGGGGCAACGTCT
GAGAAGTAGATGCGTCAAATGGTCAGACTCAGCCTTCCCTCCCTCCCTTT
TTCTTCCCCCTTCCCTCCCTTTCACCCTAGAATTACGAAGAGTTTTTCCG
GCAACGTGAAGAGAAACGGACGTTGCAGTACGACCAACAGATCGAGGCCG
CCTACTACGAAGGCGCCGACAAAAACGTCAAGTACGTGCCCTCCCTCACT
CCCTCCCTCATTCCCTTCCTGCCCTTCGCTCCCTTCCTCTTCATCGCCAC
AGACTTCCCGAGACTGTCACTCTCACGCCCACATTTCTCATCCCCCCCCC
CTTCCCTCCTTCCCTCCTTCCCTCCCTCCCTAGATTCCTTAGGGACGACC
CGAATGCCTGGGATGGCACTCCCGACACTTTTACCTCCTTCTCGCGAGGG
CAGGCGCTGGGGTTGGCGGGGAGCATGCTGGTGGGGACGGCGGGCGTGAT
GGTCGCCCAGGTAGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGGAGGGAG
GGAGGGCGGGTGGTGCCTGTTCATGACGAGGACAGGCGCTGTTGCCGTGT
TGGCGATCGGTGTGATCGGGAGGGAAGAAGGGTGTTTAGCAGTAGCAGCA
GTAGCAGCAACAACAGCAGCAGCAGCAACAGTCCCGTCCACTCACCACTC
TTCCCCCCCTCCGTCCCTCCCTCCCTCCCTCCGTCCCTCCCTCCTGCCAC
AGCGCTGGCGCCTCCTAAGGCGGTATACCTCCCCCTCGGCCTTTTCCCAT
CCCTACGACCCCCAGACTATCCGCCGACCGTTTAGCATCGAGCAGTTGAG
GACAGCCGTTACCAAGGCGTTGACCAAGGGGCTAAGGTAGGTCTTCATCC
CCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCTTGTAAAAGCCATGTTT
CGTCTTTCTTTTCCCCTCCCTCCCCCCCCCCCCTCCTGCTCACTCTCCTC
CTTCTCCCCCTCACAACCCTCCTCCCCAATACCCCCCACACAGTGCCCTC
CCTTCCGCTCCCTCCCTCCCTCCCTCCCTCCCCTTCCTCCGCGGCTCCGC
TGCCTCGTTCAAGGAAGGAGAAGGCAAAATTATCCTCTACCATTTCTGGC
GGCCGAGCAAGTAAGTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTT
CTTCTCTCCCCATCACTCGTCTCTCCGGCCACTCTCCTACCACACGCACG
ACGCCCTTTTCTCCCTCCTCACCCCTTTTCCCTCCCCTCGATCCTCCCCT
CCCTCCCCCCCTCCCCAGCCCCGACTCCCTTGCCGTGCTCTGCAAGCTCG
AGGCCCTCCTCTCTCTCTACGGCACTGAAGAGCTGATGGCCGTTTCGATC
CTCTCACCCAAATATGACACGGAAGAGGACAAAGAAACGGCCGAAGCCGC
CCTCAGAAAAATCGAGGTAAACTTGCCTTCTCTTCCCTCCCTCCCTCCCT
CCGTTCCCTCCCTCTCTCCTTTCGCTCCCTCGCTCCCTTCCTCCCTCCCT
TCCTTCCTTCCTCGCCCCCTCCCTCTACGCACTCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCCAGTGTGCCACGGGCCAGCCGTTACAGCAGCACG
CGGTCCTCGACCGCTCTCTCTCCATGTGGAAGAGCAAGGGCCTGGAAACC
TGGCCCTCCGTCGCCGTGGCTCTCCCGGGAAAACAAGATAAGGACGGACA
GCGCATTATCTTCCTCGGTGCGCGCCCCCCCCTTTCCCTACCGACCCACC
ATGGCCCCTCCCTCCTTCCCTCCCTCCCTTCCCTCCACCTCACCTTGAGC
TCACCAGGTATCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
CAGCCGCAGGGGATCGGGTGGCTGGCTCTGCCCTCTTAGAAAAAGCCGTC
GCCGCCGTCCTGGAGGTCGTCAAAGGGAAAGAAGAAGCTCGCGAATACGC
CCCCCTCTTCCCCCTCCCCCCTCCCTCTCTCTCTTTTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTTCTCCTCCCCTTCGCCGCTCCTCTTTCCATCGGACGTGGCAGCTGAT
GAGATTAATGGAAGAGTCTACGTCGCCGATACGGGGTATGCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCT
CTATCCAGTGAGTACAAATTCATTTTCCCTCCTCCCTCCCTCCCTCCCTT
CCTCTTTCCCTTCCTCCCTCCCTCTCACAAGCAACCACCGCCTTTTGGTC
TGCGACTCGACCACTGGAAAGATTCTTCGAGTGGTGGGTGGAGGCAAGCC
AGGATTCAAGGACGGATATCAAGAGGAGGCGCTCTTCAACAGTCCACAGG
TAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGAGAAGGGTGGG
AATATACTATCACATCAAGCTATTATAAATCAACCTTAATTTCGGGTGAT
AATTGCTCTACGTGCATGCCGACAGACACTTACATCGTTCTCCCTCCTGC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGACAGCTGCTCTCCTGAAA
ACAACTAACACCATCCCCCCTCCCTTCCTCCCCCCCCCCCTCCCTCAGGG
CCTCGCCCTCGACCTCGGGCGACAGCTGCTTTACGTTGCTGACACGTACA
ACGATCGTATCCGCATCGTGGATCTTAAATCCAGAGACGCCGTGTCCACC
CTCCGACCTGCCAACGCCCCGCCCTTGAACAAGGTACTAAGCCCCTCCCT
TCCTCCCTCCCGCCCTCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCTCTCCCTCCTATCTCTTCTGCCCGTTGGGTTCTTTATACATCCTTGA
CCGCCTCCCGTTTCCTTTCTTCCCTCCCTCCCTCCCTCCCTCCCGCCCTC
CCTCCCTCCCTCTCTCCCACCCTCTCTCCCCCCCTCCTTCCCAGGCATCT
CGGGGCGGTACGATAAGCGGGAGTGTGCATGACGATATTCGACGAGCTCT
GGAAGAGGAAGGTACGCCCCCCCCTCCTTCCCTCCTTCCTTCCCTTCCTT
CGCCCTCCTTCCGTATGCACACCATCCCTCCAGCTCCCCTTCCCTCCCTC
CTTCCCTCCCTCTCTTTCTCCCGCACCTTCCCATCCATCCCACACCCTCC
CTCCCTCCCTCATTCCCTCCCTCCCTCCCTCATTCCCTCCTCAAGGCAAA
GACCCTCGCCTTTCCCCGGAGCTCGGCGCCCGTCGGGCTTTTCGTCTTCC
CGTCCAACTGACATTGATGGATGACTACCTCTATGTGGCCGCCGCAGGGT
CACAGCAGGTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCTGT
CCCTCCCTCCCCCCGCCCCTCCTTTCGATTTCCCACTCTTCCGTCGATTC
GTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGAGACTGCCTCCCTCCCTC
CCTCCCCTTTCCCTTCGTGTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCT
CCGAGACTGCCTCCCTCCCTCCCTTCCCCCACACTTAGGCCAAGCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGTC
ACTAGATATGGCGTGCTGACCCCTATTCATTCGATCTTTCCCCTCTTCTT
GGGAGCGGCGCTTGTGCCGTAGCCAACCGACGCGACCCGAACTTTTCTGA
TGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGG
AGGGAGGGAGGGAGCAAATGAGGGAGGAAGGATGGGGAATTGAGAAGACA
CGAGGTAGGGAGGGAGGGAGAGTGGGTGTGAAAAATTATTTTGCGTGGAC
TCGTCCTGAACTGCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCATCCTCCCTCCCTCCCTTTGTCAGCTCTCCTCCCAATCCG
CCTTCGCCTACCCCACGGGCATCGCAGCTCTTCCAGGAAGGCTTCTAGTC
AGCGAAGCCGAGTCGAGCACCATTCGGGAGGTATGCCCTCCCTCCTTCCC
TCCCTCCCTCCGTACCTCTCTCCGTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCTTCGGATGCCTCTTTCAACGCCCATACGGGATGCTCTCAGGAACC
ACTCCCATTCCCACAACCTCTCCCTCCCTCCCTCCTTCCCTCCCTCCAGA
TCGACTTCCGGCAACGCGAGGCCCCCCTCAGCACCCTCCTGGGCAGCGAT
CGTCTTTTCTCGAAGGATTTAAGCGCTTTTGGGGACAGTGATGGATACGC
CCACTCCGTCCGTCTGCAATGTCCCATGGGACTGTGTGCCCTCTCAGGCA
CGTCTCGTCTACCCCTCCCTCCCTCCCTTCCTCCCCCGCTCCCTGCTCGC
CTCTTTCACACCCTTGGAGATAACCCGAATGCCTCTAGCTGACCCTTTCT
TTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCGTTCCCTCCAGCCTCCT
CTGCCCTCCTCTCCGACACTTACAACCATAAGATTAAGGTCTTGGTTGCC
CCCTCCGCACTGGCCATCAATGAGCAGGCAGAAGCCGCCTCTGTGTCTCG
TCTCGCTGGGAGTGGGAGGAGAGGGTTCAAAGACGGAGCTGGTAGGAAGG
GAGAGAGGGAGGGAGGGATGGGTGTTTCTTCTTCCTCTGAACACGAATGA
ATTAGCGGGCACGAGGTTCCTCGGATTGTCTCAGCAACAAGGACACCAGT
CAGTCACACCCTCCCTTCTTCCCTCCCTTCCTCCCTCCTTCCTTCTTTCC
CCTAGGCGCTACGGCACAATTCGACAATCCGCACAAAGTGTGCAACGACG
CCAGTCACTCACATCCTCCCTCCCTCCGTCCCTCTCTCCTTTCCTTCCTC
CCTCCCCTCTTTCCCCCAGGCGCCACAGCGCAATTCGACGAGCCGCGCGG
GCTGTGCGTCCAAGAGAAGCGGGGCCGGGCCTTGGTATGCGACACCAACA
ATCACGCCATTCGCACCGTTGACTTAACAACAGGGGACGTGGGGACATGG
ACTGTGATAGAGGGCAGTGTATAATAATACGGACAATCGGAGGGAGGGAA
ATAATTGATTTAATTTGAGGAAAAGGGATTGGACAATGCGTGCAAGTAAT
GACAAAAGAAAAAGAGAAAATAATCAAAACATTGGAGGCAGTGACATTGA
ACAGAT

Coding sequence (CDS) from alignment at chr27:141356..147261+

>NO27G00390.1 ID=NO27G00390.1|Name=NO27G00390.1|organism=Nannochloropsis oceanica|type=CDS|length=2598bp|location=Sequence derived from alignment at chr27:141356..147261+ (Nannochloropsis oceanica)
ATGATGCCAGCCCGGATAAAAGGACCCCCACAACTTGACCTCCTCGTCCT
CCTCGTCCTCCTTTTCCCAGCCTTCGCATCTGCGTTTGTCCGCTCCCCCT
CCCCCTCCATTCCCGGCCCTTCCCGCCATGCCTCCCTCGCTTCTTCTCCC
TCCCTCCCACTTTCCTTCCTCCTCGAACTTTCTCCTGCCTCTTCTGCCCC
TGTCACCTTCACCGCTCTTCACGCTGTGGTTGGCACGGGAGGGGGCAGTC
GGCGGAGGGGGAGGGGAGGAAGGGGGAGAGGAAGGGGGGATGACGACGAC
GGACGCCCGTTCAACATGAGCAGTGATGAGAATTACGAAGAGTTTTTCCG
GCAACGTGAAGAGAAACGGACGTTGCAGTACGACCAACAGATCGAGGCCG
CCTACTACGAAGGCGCCGACAAAAACGTCAAATTCCTTAGGGACGACCCG
AATGCCTGGGATGGCACTCCCGACACTTTTACCTCCTTCTCGCGAGGGCA
GGCGCTGGGGTTGGCGGGGAGCATGCTGGTGGGGACGGCGGGCGTGATGG
TCGCCCAGCGCTGGCGCCTCCTAAGGCGGTATACCTCCCCCTCGGCCTTT
TCCCATCCCTACGACCCCCAGACTATCCGCCGACCGTTTAGCATCGAGCA
GTTGAGGACAGCCGTTACCAAGGCGTTGACCAAGGGGCTAAGTGCCCTCC
CTTCCGCTCCCTCCCTCCCTCCCTCCCTCCCCTTCCTCCGCGGCTCCGCT
GCCTCGTTCAAGGAAGGAGAAGGCAAAATTATCCTCTACCATTTCTGGCG
GCCGAGCAACCCCGACTCCCTTGCCGTGCTCTGCAAGCTCGAGGCCCTCC
TCTCTCTCTACGGCACTGAAGAGCTGATGGCCGTTTCGATCCTCTCACCC
AAATATGACACGGAAGAGGACAAAGAAACGGCCGAAGCCGCCCTCAGAAA
AATCGAGTGTGCCACGGGCCAGCCGTTACAGCAGCACGCGGTCCTCGACC
GCTCTCTCTCCATGTGGAAGAGCAAGGGCCTGGAAACCTGGCCCTCCGTC
GCCGTGGCTCTCCCGGGAAAACAAGATAAGGACGGACAGCGCATTATCTT
CCTCGGTGCGCGCCCCCCCCTTTCCCTACCGACCCACCATGGCCCCTCCC
TCCTTCCCTCCCTCCCTTCCCTCCACCTCACCTTGAGCTCACCAGGTATC
CCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGCCGCAGGGG
ATCGGGTGGCTGGCTCTGCCCTCTTAGAAAAAGCCGTCGCCGCCGTCCTG
GAGGTCGTCAAAGGGAAAGAAGAAGCTCGCGAATACGCCCCCCTCTTCCC
CCTCCCCCCTCCCTCTCTCTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCC
CTTCGCCGCTCCTCTTTCCATCGGACGTGGCAGCTGATGAGATTAATGGA
AGAGTCTACGTCGCCGATACGGGCAACCACCGCCTTTTGGTCTGCGACTC
GACCACTGGAAAGATTCTTCGAGTGGTGGGTGGAGGCAAGCCAGGATTCA
AGGACGGATATCAAGAGGAGGCGCTCTTCAACAGTCCACAGGGCCTCGCC
CTCGACCTCGGGCGACAGCTGCTTTACGTTGCTGACACGTACAACGATCG
TATCCGCATCGTGGATCTTAAATCCAGAGACGCCGTGTCCACCCTCCGAC
CTGCCAACGCCCCGCCCTTGAACAAGGCATCTCGGGGCGGTACGATAAGC
GGGAGTGTGCATGACGATATTCGACGAGCTCTGGAAGAGGAAGGCAAAGA
CCCTCGCCTTTCCCCGGAGCTCGGCGCCCGTCGGGCTTTTCGTCTTCCCG
TCCAACTGACATTGATGGATGACTACCTCTATGTGGCCGCCGCAGGGTCA
CAGCAGATATGGCGTGCTGACCCCTATTCATTCGATCTTTCCCCTCTTCT
TGGGAGCGGCGCTTGTGCCGTAGCCAACCGACGCGACCCGAACTTTTCTG
ATCTCTCCTCCCAATCCGCCTTCGCCTACCCCACGGGCATCGCAGCTCTT
CCAGGAAGGCTTCTAGTCAGCGAAGCCGAGTCGAGCACCATTCGGGAGAT
CGACTTCCGGCAACGCGAGGCCCCCCTCAGCACCCTCCTGGGCAGCGATC
GTCTTTTCTCGAAGGATTTAAGCGCTTTTGGGGACAGTGATGGATACGCC
CACTCCGTCCGTCTGCAATGTCCCATGGGACTGTGTGCCCTCTCAGCCTC
CTCTGCCCTCCTCTCCGACACTTACAACCATAAGATTAAGGTCTTGGTTG
CCCCCTCCGCACTGGCCATCAATGAGCAGGCAGAAGCCGCCTCTGTGTCT
CGTCTCGCTGGGAGTGGGAGGAGAGGGTTCAAAGACGGAGCTGGCGCCAC
AGCGCAATTCGACGAGCCGCGCGGGCTGTGCGTCCAAGAGAAGCGGGGCC
GGGCCTTGGTATGCGACACCAACAATCACGCCATTCGCACCGTTGACTTA
ACAACAGGGGACGTGGGGACATGGACTGTGATAGAGGGCAGTGTATAA

Synonyms

Publications