NO26G00340, NO26G00340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00340 vs. NCBI_GenBank
Match: XP_005855309.1 (chc1-b-prov like-protein, partial [Nannochloropsis gaditana CCMP526] >EKU21051.1 chc1-b-prov like-protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 244.6 bits (623), Expect = 7.000e-61 Identity = 163/379 (43.01%), Postives = 187/379 (49.34%), Query Frame = 0 Query: 30 MTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLRCLYLQNNLLESLGGGGRRDARVISGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLSGLINLVTLDVSHNRLASLEGVEECIKLTTLLVAKNRLGRGGWEGGGDRGGKNCGGGVEESKGGGKEAAVPRKLDEISVLSPSITISTSSSFSSSLSISEAAEHIALLPLASLPSLHTLDISNNHLIHATRVLLPSLHPXXXXXLLSLTMEGNPFMF--------PVNQGEDRSKTDINVIKNKNEFRKLCLLTLPQLKYLDRPIFPIERAVAEGWRIAGSKGGEGAREAWMRKEQEGHRESLRVYREWAR 401 MTP++LR+LAL HDGYE PSLND LYLHFRGF RIENL PY+ L+ALWLDSNGLTE IGE G+ G L GL LVTLDVS NRL SL GVE C KL TL+ KNRLG G E S ++ SL +SEA E AL PLA LPSLHTLD+S+NHL+HA R XXXXX E NPF+F + G R I +FRKLCLL LP+LKYLDRPIFP+ERAVAEGWR ++AW R+E+E HRE+LRVYR WA+ Sbjct: 1 MTPEILRQLALNHDGYECPSLNDTLYLHFRGFRRIENLGPYTGLRALWLDSNGLTE--IGEXXXXXXXXXXXXXXXXXXXXXXXXGKE------------------------------------GGCLQGLTELVTLDVSGNRLLSLRGVEACPKLRTLVAGKNRLGSAGIES-----------------------------------------SPTAPLPHSLPVSEATEFEALRPLAGLPSLHTLDLSHNHLVHALRAXXXXXXXXXXXXXXXXXXEANPFVFEPASPLPASIADGMCRPLPLSRPIATTQDFRKLCLLALPRLKYLDRPIFPLERAVAEGWRXXXXXXXXXVKQAWTRREEEAHRENLRVYRAWAQ 300
BLAST of NO26G00340 vs. NCBI_GenBank
Match: CUG89409.1 (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 82.8 bits (203), Expect = 3.500e-12 Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 0 Query: 29 KMTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLRCLYLQNNLLESLGGGGRRDARVISGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLSGLINLVTLDVSHNRLASLEGVEECIKLTTLLVAKNRL 196 +M+ +L+ + A+ G+ TP LN++LYLHFRGF +IE L + N +ALWL++N +T+ +GL L L L+LQ+N + L G+ + +L +L++SHN L SL G+E L +L A NRL Sbjct: 20 RMSEELISDICKANGGFRTPELNEKLYLHFRGFRKIEGLGSFVNCRALWLENNIITDV---DGLDNLPVLDSLFLQHNHIAKL---------------------------------------PSELGY--SVASLKSLNISHNMLESLNGIEHFPNLEKVLAANNRL 142
BLAST of NO26G00340 vs. NCBI_GenBank
Match: ORZ36021.1 (hypothetical protein BCR44DRAFT_33873 [Catenaria anguillulae PL171]) HSP 1 Score: 80.9 bits (198), Expect = 1.300e-11 Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0 Query: 8 PALAAGTRPKDKEADDEQGGEKMTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIEN-LNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLRCLYLQNNLLESL 112 PA + +R K+ D +G MT L+ LA+ GY TP LND LYLH++GF +I + ++ Y+ LK+LWL+ N L+ + L L +LRCLYLQ N ES+ Sbjct: 14 PATLSFSRRSKKQVDG-KGFTLMTLPYLQELAVEQKGYRTPELNDNLYLHYKGFAQISDAISSYAGLKSLWLEGNALSAM---DHLHTLPNLRCLYLQENCFESI 114
BLAST of NO26G00340 vs. NCBI_GenBank
Match: CEL70830.1 (TPA: leucine rich repeat protein, putative [Neospora caninum Liverpool]) HSP 1 Score: 79.0 bits (193), Expect = 5.100e-11 Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 0 Query: 27 GEKMTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLRCL 102 G MT LLR++ A YE+P+LN++LY HFRGF +IENL+ Y+ ++ALWL+ NG+ + EGL L L+CL Sbjct: 88 GPSMTKALLRQICKASGQYESPALNEKLYFHFRGFTKIENLDSYTQVRALWLEGNGIRKI---EGLDNLKQLQCL 159
BLAST of NO26G00340 vs. NCBI_GenBank
Match: XP_002507290.1 (dynein associated LRR protein [Micromonas commoda] >ACO68548.1 dynein associated LRR protein [Micromonas commoda]) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-10 Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 0 Query: 29 KMTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTH---LRCLYLQNNLLESL 112 +MT D LR + + GY P LND LYLHF+GF RI+NL+ Y+ +++++L+ N L E L GL H LRCLY+Q N++ +L Sbjct: 4 EMTRDWLRYVCKENGGYSVPHLNDTLYLHFKGFDRIKNLDEYTAVRSIFLEGNAL------ESLDGLEHCRNLRCLYVQQNMIATL 83
BLAST of NO26G00340 vs. NCBI_GenBank
Match: CCW62742.1 (unnamed protein product [Phytomonas sp. isolate EM1]) HSP 1 Score: 75.9 bits (185), Expect = 4.300e-10 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0 Query: 30 MTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLR----CLYLQNNLLESL 112 MT +++ A+ GYE+P LND+L+LH +GF I+NL PY+N+K LWL+ N +T L GL H R L+LQNN + SL Sbjct: 1 MTKEVIVASCKANGGYESPKLNDQLFLHCKGFVEIKNLEPYTNVKVLWLEQNAIT------NLSGLEHQRDCLVSLFLQNNTICSL 80
BLAST of NO26G00340 vs. NCBI_GenBank
Match: CCW70576.1 (unnamed protein product [Phytomonas sp. isolate Hart1]) HSP 1 Score: 75.9 bits (185), Expect = 4.300e-10 Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 0 Query: 29 KMTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTH----LRCLYLQNNLLESL 112 +MT +++ A+ GYE+P LND+L+LH +GF I+NL PY+N+K LWL+ N ++ L GL H L L+LQNN + SL Sbjct: 3 EMTKEVIVASCKANGGYESPKLNDQLFLHCKGFVEIKNLKPYTNIKVLWLEQNAIS------NLSGLEHQSDCLISLFLQNNTIHSL 83
BLAST of NO26G00340 vs. NCBI_GenBank
Match: XP_005845263.1 (hypothetical protein CHLNCDRAFT_11901, partial [Chlorella variabilis] >EFN53161.1 hypothetical protein CHLNCDRAFT_11901, partial [Chlorella variabilis]) HSP 1 Score: 75.1 bits (183), Expect = 7.300e-10 Identity = 52/154 (33.77%), Postives = 67/154 (43.51%), Query Frame = 0 Query: 42 HDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLRCLYLQNNLLESLGGGGRRDARVISGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLSGLINLVTLDVSHNRLASLEGVEECIKLTTLLVAKNRL 196 H GY+TP LN LY +F+GF + L Y+ L+AL+L+ N L GL L LRCL+LQ NLL +L G L+ L L++S N+L LEG+E C L TLL A N L Sbjct: 13 HHGYQTPHLNQTLYCNFKGFGSLACLEAYTGLRALFLEGNALESTA---GLPPLPELRCLFLQQNLLRTLTPGS-----------------------------------------LAAQPRLTYLNLSGNQLRGLEGLEGCGALCTLLAADNCL 122
BLAST of NO26G00340 vs. NCBI_GenBank
Match: XP_003056168.1 (dynein associated LRR protein [Micromonas pusilla CCMP1545] >EEH59544.1 dynein associated LRR protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 73.6 bits (179), Expect = 2.100e-9 Identity = 84/351 (23.93%), Postives = 133/351 (37.89%), Query Frame = 0 Query: 29 KMTPDLLRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDSNGLTEEGIGEGLRGLTHLRCLYLQNNLLESLGGGGRRDARVISGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLSGLINLVTLDVSHNRLASLEGVEECIKLTTLLVAKNRLGRGGWEGGGDRGGKNCGGGVEESKGGGKEAAVPRKLDEISVLSPSITISTSSSFSSSLSISEAAEHIALLPLASLPSLHTLDISNNHLIHATRVLLPSLHPXXXXXLLSLTMEGNPFMFPVNQGEDRSKTDINVIKNKNEFRKLCLLTLPQLKYL-DRPIFPIERAVAEGWRIAGSKGGEGARE 379 +MT + L+ H Y TPSLND+++LHF+GF RI++L Y+ L++++L+ NGL + GL +LRCLY Q N++ ++ R + +L TL+VS+N + LE + L TL + +C KL ++ SI T S + + + + +D S ++ L S+ L L M+GNP V+ + +++RK + +P L YL DRP+F +ER AE W I G ARE Sbjct: 3 EMTEEWLKAHCKKHGMYSTPSLNDKIFLHFQGFGRIQHLEEYTGLRSIFLEGNGLEDL---FGLERCKNLRCLYAQQNMIFAI-------PRTLP-------------------------------------TSLSTLNVSNNNVRKLENLGRLPVLQTLQAS------------------HC------------------KLHDLG----SIRELTKCKMLSCVDLQQ----------------NMIDGSPEDMVR----LFSSMQ-----SLACLYMQGNP-----------------VVSSMHQYRKRMIAAIPTLTYLDDRPVFSLERTCAEAWAIGGLTAERTARE 224
BLAST of NO26G00340 vs. NCBI_GenBank
Match: OQR87727.1 (hypothetical protein ACHHYP_08087 [Achlya hypogyna]) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-8 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 15 RPKDKE-ADDEQGGEKMTPDL--LRRLALAHDGYETPSLNDRLYLHFRGFHRIENLNPYSNLKALWLDS 81 R KD+E ++Q G+ DL L ++ + +DGYETP LND L+ HF+GF +IE L P+ NLKALWL+S Sbjct: 16 RKKDREKLREKQKGQMPVMDLETLTQICVDNDGYETPELNDNLFAHFKGFQKIEGLEPFYNLKALWLES 84 HSP 2 Score: 61.2 bits (147), Expect = 1.100e-5 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0 Query: 336 FRKLCLLTLPQLKYLDRPIFPIERAVAEGWRIAGSKGGEGAREAWMRKEQEGHRESLRVYREW 399 FRK + +LPQL YLDRPIF +ERA A W+ G++ AR A+++ E + R +L+ +R+W Sbjct: 210 FRKTYITSLPQLGYLDRPIFDLERATAAAWKAGGAEAEAQARAAFVQHEHDERRRTLQEFRDW 272 The following BLAST results are available for this feature:
BLAST of NO26G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00340 ID=NO26G00340|Name=NO26G00340|organism=Nannochloropsis oceanica|type=gene|length=1734bpback to top protein sequence of NO26G00340.1 >NO26G00340.1-protein ID=NO26G00340.1-protein|Name=NO26G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=531bpback to top Synonyms
Publications
|