NO26G00190, NO26G00190 (gene) Nannochloropsis oceanica

Overview
NameNO26G00190
Unique NameNO26G00190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3783
Alignment locationchr26:63327..67109 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein SEC13 homolog
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:63327..67109 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0005515protein binding
GO:0005198structural molecule activity
Vocabulary: Cellular Component
TermDefinition
GO:0030127COPII vesicle coat
GO:0030127COPII vesicle coat
GO:0000139Golgi membrane
Vocabulary: Biological Process
TermDefinition
GO:0090114COPII-coated vesicle budding
GO:0016192vesicle-mediated transport
GO:1904263positive regulation of TORC1 signaling
GO:1904263positive regulation of TORC1 signaling
GO:0090114COPII-coated vesicle budding
GO:0016192vesicle-mediated transport
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR037363Sec13/Seh1_fam
IPR037596Sec13
IPR001680WD40_repeat
Homology
BLAST of NO26G00190 vs. NCBI_GenBank
Match: KDR66878.1 (hypothetical protein GALMADRAFT_258759 [Galerina marginata CBS 339.88])

HSP 1 Score: 278.1 bits (710), Expect = 5.000e-71
Identity = 143/329 (43.47%), Postives = 193/329 (58.66%), Query Frame = 0
Query:  133 VSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKDKGTWDTG---IVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWA------------------NTPQGEGEERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATV----ALQQASGTAPSP-------VWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            V ++T HEDM+HDAQLDYYGK+LATCSSDRT+K+F+V +  T SSP +T++ H GPVW++AWAHP++G +LAS+SYDG VLI +E + +G    G   I    +   SVNS+++ P E G +LACASSDG + +    +D +W+  +      +G N+VSWA                   TP       V R A+  CDN V++W     +     WV +   +GH DWVRDVAWAP  GL    +A+A +D  V IWT+   S+ W K  +     +   +G AP P       VWRVSWSL GN+LAVS GD  V L+K+ L G W
Sbjct:   10 VPIETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVVDGETRSSPGHTLKGHTGPVWQVAWAHPKYGHILASSSYDGKVLIWKEQQSQGNSTGGWIKIKEHTLHTASVNSVSWAPHELGAILACASSDGKVSVLTFKNDGQWDADI-FTGHAIGCNAVSWAPAVLPGSLITPQQAPAPGQTPNASQTFSVKRFASAGCDNLVKIW---GYREDSQSWVEEETLEGHTDWVRDVAWAPNIGLPRSYIATASQDKSVLIWTKETPSSPWVKTALDPSSTIISPTGAAPPPPGKFPDVVWRVSWSLAGNLLAVSCGDGKVTLWKENLKGVW 334          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: KIN98473.1 (hypothetical protein M404DRAFT_1005321 [Pisolithus tinctorius Marx 270])

HSP 1 Score: 275.8 bits (704), Expect = 2.500e-70
Identity = 145/325 (44.62%), Postives = 194/325 (59.69%), Query Frame = 0
Query:  127 PGP-GGDVSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKD---KGTWDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWANT--------PQGEGEER---VWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQASGTAPSP-------VWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            P P  G V ++T H+DM+HDAQLDYYGK+LATCSSDRT+K+F++ N   S +  +T++ H GPVW++AWAHP++G++LAS SYDG V I +E       G W T I    +   SVNSI++ P E G +LACASSDG + +    DDS+W   +      +G N+VSWA          PQ  G  +     RL +  CDN V++W     +     WV +   +GH DWVRDVAWAP  GL    +A+A +D  V IWT+   ++ W K   AL  ++ T P+P       VWRVSWSL GN+LAVS GD  V L+K+ L G W
Sbjct:    2 PAPSSGVVPVETAHDDMIHDAQLDYYGKRLATCSSDRTVKVFDIVNGSPSKAASHTLKGHTGPVWQVAWAHPKFGNMLASCSYDGKVFIWKEQAQGTTSGEW-TKIEEHALHTASVNSISWAPHELGAILACASSDGKISVLTLKDDSKWVPDI-FNAHAIGCNAVSWAPATHPGSLILPQQPGTHQPSAFKRLVSAGCDNLVKIWC---FREETQSWVEEEKLEGHTDWVRDVAWAPNIGLPRSYIATASQDKTVLIWTKDSPTSPWVK--TALDPSASTTPNPAGKFPDVVWRVSWSLAGNILAVSCGDGKVTLWKENLQGIW 319          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: KIK45891.1 (hypothetical protein CY34DRAFT_801043 [Suillus luteus UH-Slu-Lm8-n1])

HSP 1 Score: 273.1 bits (697), Expect = 1.600e-69
Identity = 144/319 (45.14%), Postives = 189/319 (59.25%), Query Frame = 0
Query:  133 VSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKDKGTWDTG---IVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWA-----------NTPQGEGEERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQASGTA--------PSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            V ++T HEDM+HDAQLDYYGK+LATCSSDRT+K+F+V       S  +T++ H GPVW++AWAHP++G +LAS SYDG VLI  E + +GT D G   +    +   SVNS+++ P E G +LACASSDG L +    DD +W   +      +G NSVSWA             P  +      R A+  CDN V++W  G  + T++ WV +   DGH DWVRDVAWAP  GL    +A+A +D  V IWT+   ++ W K  +    ASG          P  VWRVSWSL GN+LAVS GD  V L+K+ L G W
Sbjct:   10 VPIETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVIGGEPLKSSGHTLKGHTGPVWQVAWAHPKFGHILASCSYDGKVLIWGE-RSQGTADGGWTRVKEHTLHTASVNSVSWAPHELGAMLACASSDGKLSVLTFKDDGQWGADI-FNGHAIGCNSVSWAPATQPGSLIHPQQPGAQPSAPFKRFASAGCDNLVKIW--GYREDTQS-WVEEETLDGHTDWVRDVAWAPNIGLPRSYIATASQDKTVLIWTKDSMTSPWVKTALDPSTASGAPSAAAAGKFPDVVWRVSWSLAGNILAVSCGDGKVTLWKENLRGTW 323          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: KZP07045.1 (WD40 repeat-like protein [Fibularhizoctonia sp. CBS 109695])

HSP 1 Score: 273.1 bits (697), Expect = 1.600e-69
Identity = 142/326 (43.56%), Postives = 193/326 (59.20%), Query Frame = 0
Query:  133 VSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKDKGT----WDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWAN--------TPQGEG---------EERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKK--------ATVALQQASGTAPSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            V ++T H+DM+HDAQLDYYGK+LATCSSDRT+K+F+V +  T  S  +T++ H GPVW++AWAHP++G +LAS+SYDG VLI +E + +G     W T I    + + SVNS+++ P E G +LACASSDG L +    +D +W   +      +G N+VSWA         TPQ             + + R A+  CDN V++W     +     WV +   +GH DWVRDVAWAP  GL    +A+A +D  V IWT+   S+ W K        +T     +SG  P  VWRVSWSL GN+LAVS GD  V L+K+ L G W
Sbjct:   10 VPIETAHDDMIHDAQLDYYGKRLATCSSDRTVKVFDVVDGDTQRSAGHTLKGHTGPVWQVAWAHPKYGHILASSSYDGKVLIWKEQQGQGANAGGW-TKIKEHTLHSASVNSVSWAPHELGAILACASSDGKLSVLTFKNDGQWGADI-FNGHAIGCNAVSWAPATQPGSLITPQQNNAVPGQPPAPAQSIKRFASAGCDNLVKIWA---FREDSQGWVEEETLEGHTDWVRDVAWAPNIGLPRSYIATASQDKTVLIWTKDTVSSPWVKTVLDPSSASTTPAAASSGKFPDVVWRVSWSLAGNILAVSCGDGKVTLWKENLKGVW 330          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: KDQ58034.1 (hypothetical protein JAAARDRAFT_34850 [Jaapia argillacea MUCL 33604])

HSP 1 Score: 272.7 bits (696), Expect = 2.100e-69
Identity = 142/325 (43.69%), Postives = 189/325 (58.15%), Query Frame = 0
Query:  130 GGDVSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKDKGT----WDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWANT--------PQGEGE-----ERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQAS--------GTAPSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            G  + ++T HEDM+HDAQLDYYGK+LATCSSDRT+K+F+V    T  S   T++ H GPVW++AWAHP++G +LAS SYDG VLI +E +  G     W T I    +   SVNS+++ P E G +LACASSDG + +    DD +W   +      +G N+VSWA          PQ   +     + V R A+  CDN V++W      ++   WV + + +GH DWVRDVAWAP  GL    +A+A +D  V IWT+    + W K  +    AS        G  P  VWRVSWSL GN+LAVS GD  V L+K+ L G W
Sbjct:    7 GEPIPIETSHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVVEGETRRSSSQTLKGHTGPVWQVAWAHPKFGHILASCSYDGKVLIWKEQQGAGPGAGGW-TKIKEHTLHTASVNSVSWAPHELGAILACASSDGKISVLTFKDDGQWGADI-FNGHAIGCNAVSWAPAMQPGSLIMPQPNSQTPPKLQTVKRFASAGCDNLVKIWAFDEDHQS---WVEEEVLEGHTDWVRDVAWAPSIGLPRSYIATASQDKTVLIWTKDNPKSPWVKTALDPSSASIVPAGAAPGRFPDVVWRVSWSLAGNILAVSCGDGKVTLWKENLKGAW 326          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: XP_003320453.1 (hypothetical protein PGTG_01365 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >EFP76034.1 hypothetical protein PGTG_01365 [Puccinia graminis f. sp. tritici CRL 75-36-700-3])

HSP 1 Score: 271.9 bits (694), Expect = 3.600e-69
Identity = 146/333 (43.84%), Postives = 200/333 (60.06%), Query Frame = 0
Query:  123 AKMTPGPGGDVSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPY----TIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRE----NKDKGTWDTG---IVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWA--------NTPQG--EGEERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQASGTAPSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEWAAWEE 435
            A+  P P   + + T HEDM+HDAQ+D+YGK+LATCSSDRT+K+F+V  D ++  P Y    T++ H GPVW+++WAHP++GS+LAS SYDG + + RE    N   G    G   I    + + SVNSI++ P E G +LACASSDG + +    DD  W+  + +  S +G N+VSWA        N+P G  +      + ATG CD  V++WT  PS  T+   + + L+ GH DWVRDVA++P  GL    LASAG+D  V +WTQ      WK+ T+      G    PVWRVSWS+ GNVLAV++GD  V L+K+ L G W    E
Sbjct:    6 AQSNPAP---LQVQTHHEDMIHDAQMDFYGKRLATCSSDRTVKVFDV-VDPSAVEPKYQLVDTLRGHDGPVWQVSWAHPKFGSILASCSYDGKIFVWRETSTGNGSAGQRQAGWEKIKEHTLHSASVNSISWAPHEYGPILACASSDGKVSVLTFKDDGTWDAPLFVAHS-IGCNAVSWAPPYLPTSLNSPSGAQQAGPEPQKFATGGCDGLVKIWTLNPS--TQIWELSETLEGGHTDWVRDVAYSPSIGLARTYLASAGQDRVVNVWTQDGAKGTWKQHTLDPSGNGGKFNGPVWRVSWSIGGNVLAVTAGDGKVTLWKENLKGRWECVSE 331          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: OAV94541.1 (hypothetical protein PTTG_05744 [Puccinia triticina 1-1 BBBD Race 1])

HSP 1 Score: 271.9 bits (694), Expect = 3.600e-69
Identity = 144/333 (43.24%), Postives = 201/333 (60.36%), Query Frame = 0
Query:  123 AKMTPGPGGDVSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPY----TIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKDKGT-------WDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWA--------NTPQG--EGEERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQASGTAPSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEWAAWEE 435
            A+  P P   + + T HEDM+HDAQ+D+YGK+LATCSSDRT+K+F+V  D ++  P Y    T++ H GPVW+++WAHP++GS+LAS SYDG + + RE    G+       W+  I    + + SVNSI++ P E G +LACASSDG + +    DD  W+  + +  S +G N+VSWA        ++P G  +      + ATG CD  V++WT  PS  T+   + + L+ GH DWVRDVA++P  GL    LASAG+D  V +WTQ      WK+ T+      G    PVWRVSWS+ GNVLAV++GD  V L+K+ L G W    E
Sbjct:    6 AQSNPAP---LQVQTHHEDMIHDAQMDFYGKRLATCSSDRTVKVFDV-VDPSAVEPKYQLVDTLRGHDGPVWQVSWAHPKFGSILASCSYDGKIFVWRETSGTGSVNQRQTGWEK-IKEHTLHSASVNSISWAPHEYGPILACASSDGKVSVLTFKDDGTWDAPLFVAHS-IGCNAVSWAPPYLPTSLSSPSGAQQAAPEPQKFATGGCDGLVKIWTLNPS--TQIWELSETLEGGHTDWVRDVAYSPSIGLARTYLASAGQDRVVNVWTQDGTKGAWKQHTLDPSGNGGKFNGPVWRVSWSIGGNVLAVTAGDGKVTLWKENLKGRWECVSE 330          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: KNZ61294.1 (hypothetical protein VP01_1423g1 [Puccinia sorghi])

HSP 1 Score: 271.2 bits (692), Expect = 6.100e-69
Identity = 142/330 (43.03%), Postives = 201/330 (60.91%), Query Frame = 0
Query:  123 AKMTPGPGGDVSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPY----TIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRE--------NKDKGTWDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWA--------NTPQG--EGEERVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQASGTAPSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEWA 431
            A+  P P   + + T HEDM+HDAQ+D+YGK+LATCSSDRT+K+F+V  + ++  P Y    T++ H GPVW+++WAHP++GS+LAS SYDG + + RE        N+ +  W+  I    + + SVNSI++ P E G +LACASSDG + +    DD  W+  + +  S +G N+VSWA        ++P G  +      + ATG CD  V++W   PS  T+   + + L+ GH DWVRDVA++P  GL    LASAG+D  V +WTQ      WK+ T+      G    PVWRVSWS+ GNVLAV++GD  V L+K+ L G WA
Sbjct:    6 AQTNPAP---LQIQTHHEDMIHDAQMDFYGKRLATCSSDRTVKVFDV-VEPSAVEPKYQLVDTLRGHDGPVWQVSWAHPKFGSILASCSYDGKIFVWRETSNGTGAVNQRQAAWEK-IKEHTLHSASVNSISWAPHEYGPILACASSDGKVSVLTFKDDGTWDAPLFVAHS-IGCNAVSWAPPYLPTSLSSPAGGQQAASEPQKFATGGCDGLVKIWMLNPS--TQIWELSETLEGGHTDWVRDVAYSPSIGLARTYLASAGQDRVVNVWTQDGAKGSWKRHTLDPSGNGGKFNGPVWRVSWSIGGNVLAVTAGDGKVTLWKENLKGRWA 327          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: XP_007766508.1 (WD40 repeat-like protein [Coniophora puteana RWD-64-598 SS2] >EIW82861.1 WD40 repeat-like protein [Coniophora puteana RWD-64-598 SS2])

HSP 1 Score: 270.8 bits (691), Expect = 8.000e-69
Identity = 148/321 (46.11%), Postives = 195/321 (60.75%), Query Frame = 0
Query:  133 VSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSP-PYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKD---KGTWDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWA-NTPQG------EGEER----VWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKK-----ATVALQQASGTA----PSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            V ++T HEDM+HDAQLDYYGK++ATCSSDRT+K+F+V +     SP   T++ H GPVW++AWAHP++G +LAS SYDG VLI RE       G W T +    +   SVNSI++ P E G +LACASSDG L +    DD  W   +      +G N+VSWA  TP G      +G+++    V R A+  CDN V++W  G    T++ WV +   +GH DWVRDVAWAP  GL    +A+A +D  V IWT+   +  W K     +T A+  A+G      P  VWRVSWSL GN+LAVS GD  V L+K+ L G W
Sbjct:   10 VPIETAHEDMIHDAQLDYYGKRMATCSSDRTVKVFDVVDGQAQKSPVGQTLKGHTGPVWQVAWAHPKFGQILASCSYDGKVLIWREQGQGPAAGGW-TKVGEHTLHTASVNSISWAPYELGAMLACASSDGKLSVLTFKDDGSWGADI-FNGHAIGCNAVSWAPATPPGSLIHPQQGQQQAPAGVKRFASAGCDNLVKIW--GYRDETQS-WVEEETLEGHTDWVRDVAWAPNIGLPRSYIATASQDKSVIIWTKDMPAAPWVKNVLDPSTAAVSAAAGGGTGKFPDVVWRVSWSLAGNILAVSCGDGKVTLWKENLRGGW 325          
BLAST of NO26G00190 vs. NCBI_GenBank
Match: OAX36417.1 (WD40 repeat-like protein [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 269.6 bits (688), Expect = 1.800e-68
Identity = 143/318 (44.97%), Postives = 189/318 (59.43%), Query Frame = 0
Query:  133 VSLDTQHEDMVHDAQLDYYGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWGSLLASASYDGMVLIHRENKD---KGTWDTGIVHQGVENQSVNSIAFGPAEDGLLLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWANT--------PQGEGEERV---WRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPPTGLTALMLASAGEDGKVFIWTQAPGSNHWKKATV-------ALQQASGTAPSPVWRVSWSLTGNVLAVSSGDQHVALYKQRLNGEW 430
            V ++T HEDM+H+AQLDYYGK+LATCSSDRT+KIF+V    T  S  +T++ H GPVW++AWAHP++G++LAS SYDG VLI  E       G W T +    +   SVN+I++ P E G +LACASSDG L +    DD +W   +      +G NSVSWA          PQ  G +      R ++  CDN VR+W  G  + T++ WV +   DGH DWVRDVAWA   GL    +A+A +D  V IWT+   ++ W K  +            +G  P  VWRVSWSL GN+LAVS GD  V L+K+ + GEW
Sbjct:   10 VPIETAHEDMIHEAQLDYYGKRLATCSSDRTVKIFDVVEGETVKSSGHTLKGHTGPVWQVAWAHPKFGNILASCSYDGKVLIWGERSQGTVGGGW-TKVKEHTLHTASVNAISWAPHELGAILACASSDGKLSVLTFKDDGQWGADI-FNGHAIGCNSVSWAPATQPGSLIHPQQPGTQPAAPFKRFSSAGCDNLVRIW--GYREDTQS-WVEEETLDGHTDWVRDVAWASNIGLPRSYIATASQDKSVLIWTKDSPTSPWVKTALDPSTTPGVPSAVAGKFPDVVWRVSWSLAGNILAVSCGDGKVTLWKENIRGEW 322          
The following BLAST results are available for this feature:
BLAST of NO26G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KDR66878.15.000e-7143.47hypothetical protein GALMADRAFT_258759 [Galerina m... [more]
KIN98473.12.500e-7044.62hypothetical protein M404DRAFT_1005321 [Pisolithus... [more]
KIK45891.11.600e-6945.14hypothetical protein CY34DRAFT_801043 [Suillus lut... [more]
KZP07045.11.600e-6943.56WD40 repeat-like protein [Fibularhizoctonia sp. CB... [more]
KDQ58034.12.100e-6943.69hypothetical protein JAAARDRAFT_34850 [Jaapia argi... [more]
XP_003320453.13.600e-6943.84hypothetical protein PGTG_01365 [Puccinia graminis... [more]
OAV94541.13.600e-6943.24hypothetical protein PTTG_05744 [Puccinia triticin... [more]
KNZ61294.16.100e-6943.03hypothetical protein VP01_1423g1 [Puccinia sorghi][more]
XP_007766508.18.000e-6946.11WD40 repeat-like protein [Coniophora puteana RWD-6... [more]
OAX36417.11.800e-6844.97WD40 repeat-like protein [Rhizopogon vinicolor AM-... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL051nonsL051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR086ncniR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00190.1NO26G00190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674915gene_10613Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00190.1NO26G00190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00190 ID=NO26G00190|Name=NO26G00190|organism=Nannochloropsis oceanica|type=gene|length=3783bp
AGTCGTTTCATGCCTCTCTTTGATCTCTAAATCGGGCTTGGCGAGTACAT
TTCTGAGAGGACAGACAGACACGGAGCCTGTTTTATGTGCATTTACCGCC
ACTACCCCAGTGCGAGCATTGTGCATCTCTGCACGCGCTAGTGTGTGGTC
TTTGCCTTTGTCTTCGTTTTCAAAGCCACTCACCCTCCCCCACCCCATCA
TCATCAACACCCACAGGAGAAGCGGCTCAAAGCAAGTTTCCCCCCCACTC
CATCCGCAGCAACGATGGACCCCTACGCTCACCAGCACCACCACCAGCAG
CAACAAGGCTATTACGGCCAGCAGCAGGCGTCGCGCCCGCAGCAGCAACC
CGCGTACGGAGGTGGCTACCCTCCCCAGCAGCAGCAGCAGCAGCAGTACC
AGCAGCAGCAGGCGCCTTCGGCCTACGCCTCCTACCCGCCGCAGCCACAA
GCCGCCTACCCACCCCAGCAGCAGCCATTATACCAGCAGCAGCAACCACA
ACAGCAGCAATATGCACCACTCCAGCAGCAGCCGCAGCAGCCGCAGCAGC
CGCAGCAGCAGGCTTACCAACCTGCGCAGCTGCAGCAGCAGGAGGTATCT
CAACAGGCGAGCCTCCCTCCTGCTCTGCCGGCAAAGATGACCCCCGGCCC
CGGTGGCGACGTGTCTCTCGACACGCAGCACGAGGACATGGTGCATGATG
CCCAACTGGATTACTACGGGAAGAAGCTTGCCACGTGTTCCAGCGACCGG
ACGATCAAGgtatgtccttcgctcccttcctcctttcctcccttcctccc
tccccattccctcccctcgccaccctttgtcaatttctacaagcatccct
ccttcacttgttcaacctgacgtatccgtttgctttgaccgtaaagaaag
agggaaagaaatggcaaacgcctgtactttttttttcattttttaaatca
gaccctctcaccccccctccctccctccctccctccctcccccggccccc
cttttcatgcaagATCTTCGAGGTCAACAACGACCACACCTCCTCCTCCC
CTCCGTACACCATCCAGCAGCACGTCGGCCCTGTCTGGGAAATCGCCTGG
GCACATCCGCGTTGGGGTAGCCTGCTGGCTTCTGCCTCTTACGATGGCAT
Ggtatgttccttaccctccctccctcccttcttccctccctccctccctc
tctccttcttttcctttcttcttgcctcgtacgcccatcgagcagatccc
aggagatgctgtgtctgtggctgcctctttttccctatttctcattttcc
ttcttgtgggtcgtctgtccccctccactcacgtctccctccctccctcc
ctccctccccagGTCCTCATCCACCGCGAGAACAAAGACAAGGGCACCTG
GGACACGGGTATCGTCCATCAGGGCGTGGAGAACCAGAGTGTCAACAGCA
TTGCCTTCgtgagttttcctccctccctccctccctccctccctccttcc
ttccattttcgttcttacaattgcccgagcgtggcactcatcctctcttt
ccctccctcccccctccctccctccctctctgcagGGCCCCGCGGAGGAC
GGTCTGCTTCTGGCCTGCGCCTCGTCCGACGGCTTCCTCTACCTCTACCA
CCACACCGACGgtgagcgaacccttccctccctccctccctccccctcct
ttattgcccatttttcatatttcccaccgaccttctctccctccctccct
cccttcctcgtagACTCTCGCTGGGAGGAGCTGGTGCGTCTCCGCACCTC
CACCCTCGGCACTAACAGCGTATCCTGGGCGAACACTCCGCAGGGCGAGG
GGGAGgtagggagggagggagggagggaaggagggatgggcaggggacga
tcgacagcgagagagagagatcgagacagagagagacagacagacagcaa
ctcagaggcagagggagcgaccatcaccgagagagaaagagagggatcga
gagagacagacagcgacaatactaagccaaaaggcacctgcactgccccc
ccccctccctccctccctccctccctccctccctccctccctccagGAGC
GAGTGTGGCGCCTGGCCACGGGGAGCTGCGACAACGAAGTCCGCGTTTGG
ACCGGCGGTCCCTCCAAACGGACCGAGGCCGAGTGGGTCTGTGACATTCT
TCAGgtaatccctccctccctccctccctcttcttctcctctttcttccc
tcctcccatccttactggcgctatgtctcatcctttgatatcgttttctg
gtctccttatttatccgcccttaccgtgcccctgtccactcaccattacc
gcaccacagctcatcttccctccctctctccctacctcccttcctctcac
tcactccctctctttctctctctcttctctctctctgacgcgctcttcct
ccctctctccctccctccctccagGACGGGCACAAGGATTGGGTGCGTGA
CGTGGCGTGGGCTCCTCCCACGGGCTTGACGGCTCTCATGCTGGCGTCGG
CGGGCGAGGACGGGAAGgtacgaacggacggagggagggagggagggagg
gagggaggaggattctgcatggaagcgtgtgtgttggtgcctcctaccct
tgtctgtcggtgggagaaggagctggggaaaggaaggagggcgaaaggaa
gggagggagagaggaataattcacaatgaaagaaaaaatacaaggggaaa
gggagggagggagggacggatagacggatacttccatgtctgtcttttga
atgggttgatagctcgacgtccattcactcatgcttccctctttcctccc
tttcccgcctccctccagGTGTTCATCTGGACACAGGCCCCGGGCTCCAA
CCACTGGAAGAAGGCCACTGTCGCGCTGCAGCAGGCGTCGGGCACTGCGC
CTTCCCCGGTTTGGAGGGTTAGCTGgtaaggagagagggagggaaggagg
gaggagtgggggagcgggaaggtatttttacagattttctttttttgggg
ggctatggcgggccgaagaggcgtcacgacatattcacccctccttccct
ccctccctccttccctcagGTCCCTGACCGGCAACGTGCTGGCGGTGTCG
TCCGGAGACCAACACGTCGCCTTGTACAAGCAGAGGCTTAACGGGGAGTG
GGCGGCGTGGGAAGAGACGCTGGGCGGGGGGGAGGGATGGAAGAAGGTCG
ACTCGGCGGCGGGTCCTCCCCCGACGGCGACGGGGAATGCCTCTCCTGCC
TTGCCGAGCAGTTGAGTTGAGAGGTGTCGAGCAGTTGAGTTGAGAAGAAG
GGAAAGGAGGGAGGGAGGGAGGAGGGAAGATTATGATGGTGGTGGTGGCG
GCCTAGAAATATGATGGGGATTGATTTCAAAGGGGCAACATCTGAGCGAG
AAGGAAGAGAGGGAAGGTCAACACCAGCATCATGGAGACAACAATTATCA
GGAGGAAACCTGAAAATGTCGGCGGGAAGAAGAAAGAAGAGGGGAACAGA
AAGGGATAGGAAAAGAAAGGGAAAGCAAATCCAAAACGAGAAAGCCAAAT
GAAAAAGAGCGAGAAGAATGCACAAAGTGGATGGAGCGGGAAGTGAGGGA
GGGAGGGGAACAGCCGCAACAGAAACTATAACTATGAAAGAAGAAAGACG
AGGAAGGATTTAGACCCCATACTCTCAAGTTGTCTGCAGACGCACACAAG
TCGCCCTCCGTAATGATGGCAAGCTCGATTAAA
back to top

protein sequence of NO26G00190.1

>NO26G00190.1-protein ID=NO26G00190.1-protein|Name=NO26G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MDPYAHQHHHQQQQGYYGQQQASRPQQQPAYGGGYPPQQQQQQQYQQQQA
PSAYASYPPQPQAAYPPQQQPLYQQQQPQQQQYAPLQQQPQQPQQPQQQA
YQPAQLQQQEVSQQASLPPALPAKMTPGPGGDVSLDTQHEDMVHDAQLDY
YGKKLATCSSDRTIKIFEVNNDHTSSSPPYTIQQHVGPVWEIAWAHPRWG
SLLASASYDGMVLIHRENKDKGTWDTGIVHQGVENQSVNSIAFGPAEDGL
LLACASSDGFLYLYHHTDDSRWEELVRLRTSTLGTNSVSWANTPQGEGEE
RVWRLATGSCDNEVRVWTGGPSKRTEAEWVCDILQDGHKDWVRDVAWAPP
TGLTALMLASAGEDGKVFIWTQAPGSNHWKKATVALQQASGTAPSPVWRV
SWSLTGNVLAVSSGDQHVALYKQRLNGEWAAWEETLGGGEGWKKVDSAAG
PPPTATGNASPALPSS*
back to top
Synonyms
Publications