NO24G02380, NO24G02380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02380 vs. NCBI_GenBank
Match: EWM24450.1 (adenylate kinase isoenzyme 6 [Nannochloropsis gaditana]) HSP 1 Score: 228.8 bits (582), Expect = 2.000e-56 Identity = 110/138 (79.71%), Postives = 122/138 (88.41%), Query Frame = 0 Query: 66 PRQTTPLLRAGLKRPNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQV 204 P +T PLLRA LKRPNILITGTPGTGKTTTAR IA ATGL H++VGD+ KE +C+EG+D ELDT ILDE+KLLD +E++LADGG VVDYHSCELFPERWFDL+LVVRA NA LFDRLSARGYS RKR ENLECEIMQV Sbjct: 6 PHRTNPLLRASLKRPNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQV 143
BLAST of NO24G02380 vs. NCBI_GenBank
Match: XP_005855774.1 (transcription initiation factor TFIID subunit 9 / adenylate kinase, partial [Nannochloropsis gaditana CCMP526] >EKU20578.1 transcription initiation factor TFIID subunit 9 / adenylate kinase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 209.5 bits (532), Expect = 1.200e-50 Identity = 100/124 (80.65%), Postives = 111/124 (89.52%), Query Frame = 0 Query: 80 PNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQV 204 PNILITGTPGTGKTTTAR IA ATGL H++VGD+ KE +C+EG+D ELDT ILDE+KLLD +E++LADGG VVDYHSCELFPERWFDL+LVVRA NA LFDRLSARGYS RKR ENLECEIMQV Sbjct: 1 PNILITGTPGTGKTTTARYIAGATGLEHVSVGDVAKEKECFEGRDVELDTNILDEEKLLDHLEIILADGGKVVDYHSCELFPERWFDLILVVRATNAVLFDRLSARGYSTRKREENLECEIMQV 124
BLAST of NO24G02380 vs. NCBI_GenBank
Match: SAM03764.1 (hypothetical protein [Absidia glauca]) HSP 1 Score: 193.4 bits (490), Expect = 9.100e-46 Identity = 92/133 (69.17%), Postives = 111/133 (83.46%), Query Frame = 0 Query: 78 KRPNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKE 211 K PNIL+TGTPGTGKTTT+ IAEATGL+H+NVG+L+K + YEG EE DT+ILDEDKLLD ME LL +GG+VVDYH+CELFPERWFDLVLV+RA TLFDR+ RGY+ +KR+EN+ECEIMQV + +E Sbjct: 4 KLPNILVTGTPGTGKTTTSEMIAEATGLTHVNVGELIKAGQFYEGYLEEYDTHILDEDKLLDEMEDLLKEGGNVVDYHTCELFPERWFDLVLVLRAQTHTLFDRMEKRGYNQKKRDENMECEIMQVVLDEARE 136
BLAST of NO24G02380 vs. NCBI_GenBank
Match: CBN76984.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 191.8 bits (486), Expect = 2.700e-45 Identity = 86/132 (65.15%), Postives = 108/132 (81.82%), Query Frame = 0 Query: 80 PNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKEG 212 PN+LITGTPGTGKT T++ IAE TGL H+NVGD+V+ +C+EG+DE DT+ILDEDKL D ME + +GG+V+D+HSC+ FPE WFDL+LV+RA+ +TLFDRL ARGYS +K EN+ECEIMQV E KEG Sbjct: 7 PNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDESFDTFILDEDKLCDAMETQMEEGGNVIDFHSCDFFPEHWFDLILVLRAETSTLFDRLKARGYSEKKVGENVECEIMQVVLEEAKEG 138
BLAST of NO24G02380 vs. NCBI_GenBank
Match: ORZ22307.1 (AAA domain-domain-containing protein [Absidia repens]) HSP 1 Score: 190.3 bits (482), Expect = 7.700e-45 Identity = 89/133 (66.92%), Postives = 109/133 (81.95%), Query Frame = 0 Query: 78 KRPNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKE 211 K PNIL+TGTPGTGKTTT+ IA+ TGL+H+NVGDL+K + YEG EE DT+ILDEDKLLD +E ++ +GG VVDYH+CELFPERWFDLVLV+RA TLFDR+ RGY+ +KR+EN+ECEIMQV + KE Sbjct: 6 KLPNILVTGTPGTGKTTTSEMIAQVTGLTHINVGDLIKSKQFYEGYLEEYDTHILDEDKLLDDLEDVMQEGGKVVDYHTCELFPERWFDLVLVLRAQTHTLFDRMEKRGYNQKKRDENMECEIMQVVLDEAKE 138
BLAST of NO24G02380 vs. NCBI_GenBank
Match: OAD03564.1 (hypothetical protein MUCCIDRAFT_178813 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 187.2 bits (474), Expect = 6.500e-44 Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0 Query: 80 PNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKE 211 PNIL+TGTPGTGKTTT+ IAEATGL H+NVGD+VK + +EG EE DT++LDEDKLLD +E +L DGG VVD+H+CE+FPERWFDLVLV+RAD ++L+DR+ RGY+ RK +EN+ECEIMQV E E Sbjct: 6 PNILVTGTPGTGKTTTSEMIAEATGLEHVNVGDIVKSKQLHEGYLEEFDTHVLDEDKLLDELEEMLKDGGKVVDFHTCEIFPERWFDLVLVLRADTSSLYDRMPCRGYNKRKIDENMECEIMQVVLETAHE 136
BLAST of NO24G02380 vs. NCBI_GenBank
Match: OAQ27615.1 (P-loop containing nucleoside triphosphate hydrolase protein [Mortierella elongata AG-77]) HSP 1 Score: 186.8 bits (473), Expect = 8.500e-44 Identity = 87/135 (64.44%), Postives = 107/135 (79.26%), Query Frame = 0 Query: 80 PNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKEGGRE 215 PNILITGTPGTGKTTT+ AEATGL+H+NVGDLVK +EG D E D+YILDEDKL+D ME ++ GG +VD+H+CE+FPERWFDLV+V+R DN L+ RL +RGY+A+K NEN+ECEIMQV E +E E Sbjct: 19 PNILITGTPGTGKTTTSEMAAEATGLTHINVGDLVKAKSLHEGLDTEYDSYILDEDKLIDEMEEMMRPGGKIVDFHTCEIFPERWFDLVIVLRTDNGVLYPRLESRGYNAKKINENMECEIMQVVLEEARESYEE 153
BLAST of NO24G02380 vs. NCBI_GenBank
Match: EPB83794.1 (hypothetical protein HMPREF1544_09427 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 186.4 bits (472), Expect = 1.100e-43 Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0 Query: 80 PNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKE 211 PNIL+TGTPGTGKTTT+ IAEATGL H+NVGD+VK + +EG EE DT++LDEDKLLD +E +L DGG VVD+H+CE+FPERWFDLVLV+RAD ++L+DR+ RGY+ RK +EN+ECEIMQV E E Sbjct: 6 PNILVTGTPGTGKTTTSEMIAEATGLEHVNVGDIVKSKQLHEGYLEEFDTHVLDEDKLLDELEEMLKDGGKVVDFHTCEIFPERWFDLVLVLRADTSSLYDRMVKRGYNKRKIDENMECEIMQVVLETAHE 136
BLAST of NO24G02380 vs. NCBI_GenBank
Match: XP_021885568.1 (AAA domain-domain-containing protein [Lobosporangium transversale] >ORZ27865.1 AAA domain-domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 185.7 bits (470), Expect = 1.900e-43 Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 0 Query: 80 PNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKEGGRE 215 PNILITGTPGTGKTTT+ AEATGL+HLNVGDLVK +EG D + D+YILDEDKL+D ME ++ GG +VD+H+C++FPERWFDLV+V+R DN+ L+ RL +RGY+A+K NEN+ECEIMQV E +E E Sbjct: 20 PNILITGTPGTGKTTTSEMAAEATGLTHLNVGDLVKTKSLHEGLDTDFDSYILDEDKLIDEMEDMMKPGGKIVDFHTCDIFPERWFDLVIVLRTDNSVLYPRLESRGYNAKKINENMECEIMQVVLEDARESYAE 154
BLAST of NO24G02380 vs. NCBI_GenBank
Match: KFH72756.1 (transcription initiation factor TFIID subunit D7 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 184.5 bits (467), Expect = 4.200e-43 Identity = 88/136 (64.71%), Postives = 106/136 (77.94%), Query Frame = 0 Query: 79 RPNILITGTPGTGKTTTARSIAEATGLSHLNVGDLVKEAKCYEGKDEELDTYILDEDKLLDCMEVLLADGGHVVDYHSCELFPERWFDLVLVVRADNATLFDRLSARGYSARKRNENLECEIMQVAWEGRKEGGRE 215 RPNILITGTPGTGKTTT+ AEA+GL H+NVGDLVK +EG D E D+YILDEDKL+D ME + GG+VVD+H+CE+FPERWFDLV+V+R DN L+ RL RGY+A+K NEN+ECEIMQV E +E E Sbjct: 19 RPNILITGTPGTGKTTTSEMAAEASGLKHINVGDLVKAKGLHEGLDTEYDSYILDEDKLIDEMEDFMRPGGNVVDFHTCEIFPERWFDLVIVLRTDNNILYPRLEGRGYNAKKINENMECEIMQVVLEDARESYAE 154 The following BLAST results are available for this feature:
BLAST of NO24G02380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02380 ID=NO24G02380|Name=NO24G02380|organism=Nannochloropsis oceanica|type=gene|length=2360bpback to top protein sequence of NO24G02380.1 >NO24G02380.1-protein ID=NO24G02380.1-protein|Name=NO24G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=259bpback to top protein sequence of NO24G02380.2 >NO24G02380.2-protein ID=NO24G02380.2-protein|Name=NO24G02380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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