NO24G02110, NO24G02110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G02110 vs. NCBI_GenBank
Match: XP_003741715.1 (PREDICTED: proteasome activator complex subunit 3-like [Galendromus occidentalis]) HSP 1 Score: 94.7 bits (234), Expect = 4.200e-16 Identity = 45/136 (33.09%), Postives = 86/136 (63.24%), Query Frame = 0 Query: 103 VHVNPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 V +N + LF+ K L+++ + D +LK+++ L+ P + DG +F +QE+ L+ +SS+ S + L +Y++ RA +VK +YP V D+RK +E++D++Q +++ V + N+Y IHD +TKN +++K+ Sbjct: 122 VKLNQTLTKLFEITKPLIVQQINDCNLLKMWIELSIPKVEDGNNFGVDIQEECLKEVSSAESEAALYLDQPARYYMSRAKMIVKLAKYPHVEDYRKTIEELDEKQYMNVKLVVRELFNNYAAIHDMLTKNLEKIKR 257
BLAST of NO24G02110 vs. NCBI_GenBank
Match: XP_017487859.1 (PREDICTED: proteasome activator complex subunit 3-like [Rhagoletis zephyria]) HSP 1 Score: 93.2 bits (230), Expect = 1.200e-15 Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 0 Query: 103 VHVNPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLK 237 V N + AL VK L+ +LVED +LK+++ P I DG +F S+QED L I + + + +YFL RA V K +YP V DFR+ VE++D+++ LSL V +RN Y +HD +TKN +++K Sbjct: 122 VPCNKNIVALIDIVKPLIRQLVEDSNLLKMWILFLIPRIEDGNNFGVSIQEDTLGEIRTVEAEASAYFDQMSRYFLGRAKIVTKIAKYPHVEDFRRNVEEIDEKEFLSLRLIVAELRNHYASLHDIVTKNLEKIK 256
BLAST of NO24G02110 vs. NCBI_GenBank
Match: PRD34858.1 (Proteasome activator complex subunit 3 [Nephila clavipes]) HSP 1 Score: 93.2 bits (230), Expect = 1.200e-15 Identity = 50/133 (37.59%), Postives = 78/133 (58.65%), Query Frame = 0 Query: 106 NPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 N + A+ + VK + +LVED VLK++++ P I DG +F S+QED L I + S I +YFL R V K +YP V DFR+ V ++D+++ LS+ + +RN Y +HD ITKN +++K+ Sbjct: 74 NSHIVAVVELVKPRIQQLVEDANVLKMWIQFLIPRIEDGNNFGVSIQEDTLGEIRTVESEAAAYFDQISRYFLTRGKIVSKVAKYPHVDDFRRTVSELDEKEFLSMRLIICELRNHYATLHDLITKNLEKIKK 206
BLAST of NO24G02110 vs. NCBI_GenBank
Match: KXJ76000.1 (hypothetical protein RP20_CCG010543 [Aedes albopictus]) HSP 1 Score: 92.8 bits (229), Expect = 1.600e-15 Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 0 Query: 103 VHVNPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 VH N + L + VK ++ LVED +LK+++ P I DG +F S+QED L I S + I +YF+ RA V K +YP + D+R+AV+++D+++ LSL + +RN Y +HD + KN ++LK+ Sbjct: 8 VHCNTPICDLIKVVKPVIRALVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVETEAAAFFDQISRYFVSRAKVVSKVAKYPHIDDYRRAVQELDEKEFLSLWLVLSEVRNRYCSLHDIVIKNMEKLKK 143
BLAST of NO24G02110 vs. NCBI_GenBank
Match: XP_019558824.1 (PREDICTED: proteasome activator complex subunit 3 [Aedes albopictus] >XP_019563153.1 PREDICTED: proteasome activator complex subunit 3 [Aedes albopictus]) HSP 1 Score: 92.8 bits (229), Expect = 1.600e-15 Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 0 Query: 103 VHVNPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 VH N + L + VK ++ LVED +LK+++ P I DG +F S+QED L I S + I +YF+ RA V K +YP + D+R+AV+++D+++ LSL + +RN Y +HD + KN ++LK+ Sbjct: 107 VHCNTPICDLIKVVKPVIRALVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVETEAAAFFDQISRYFVSRAKVVSKVAKYPHIDDYRRAVQELDEKEFLSLWLVLSEVRNRYCSLHDIVIKNMEKLKK 242
BLAST of NO24G02110 vs. NCBI_GenBank
Match: KFM60484.1 (Proteasome activator complex subunit 3, partial [Stegodyphus mimosarum]) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-15 Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 0 Query: 106 NPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 N + + + VK + +LVED VLK++++ P I DG +F S+QED L I + S I +YFL R V K +YP V DFR+ V+++D+++ LS+ + +RN Y +HD ITKN +++K+ Sbjct: 118 NNHIVGVVELVKPRIQQLVEDANVLKMWIQFLIPRIEDGNNFGVSIQEDTLGEIRTVESEAAAYFDQISRYFLTRGKIVSKVAKYPHVDDFRRTVQELDEKEFLSMRLIICELRNHYATLHDMITKNLEKIKK 250
BLAST of NO24G02110 vs. NCBI_GenBank
Match: XP_015903467.1 (proteasome activator complex subunit 3 isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 91.7 bits (226), Expect = 3.600e-15 Identity = 48/133 (36.09%), Postives = 78/133 (58.65%), Query Frame = 0 Query: 106 NPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 N + + + VK + +LVED VLK++++ P I DG +F S+QED L + + S I +YFL R V K +YP V DFR+ V+++D+++ LS+ + +RN Y +HD ITKN +++K+ Sbjct: 117 NSHIVDVVELVKPRIQQLVEDANVLKMWIQFLIPRIEDGNNFGVSIQEDTLGEVRTVESEAAAYFDQISRYFLTRGKIVSKVAKYPHVDDFRRTVQELDEKEFLSMRLIICELRNHYATLHDMITKNLEKIKK 249
BLAST of NO24G02110 vs. NCBI_GenBank
Match: CEO95185.1 (hypothetical protein PBRA_003951 [Plasmodiophora brassicae]) HSP 1 Score: 90.9 bits (224), Expect = 6.100e-15 Identity = 49/144 (34.03%), Postives = 86/144 (59.72%), Query Frame = 0 Query: 106 NPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQASKPERHSSHM 249 N V L + +K +L L++ L VLKL+V+L P+I DG +F S+QE++ ++ + +++GL L KY+ R + K +YP V D+ + + ++D+++ L L + +RN+Y ++ D ITKN+DRL++ H S M Sbjct: 86 NRGVTQLLEVLKVEILELIQYLDVLKLWVQLNIPSIQDGNNFGVSIQEEIAGMLEAGKNSGLGFLDTFTKYYATRGKLITKLNKYPNVDDYHRGIAELDEKKHLLLRHCCLDLRNNYAVLFDMITKNKDRLEKPRGLSNHISSM 229
BLAST of NO24G02110 vs. NCBI_GenBank
Match: CRK96527.1 (CLUMA_CG009935, isoform A [Clunio marinus]) HSP 1 Score: 90.9 bits (224), Expect = 6.100e-15 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 103 VHVNPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQ 238 V N + + + VK ++ LVED +LK+++ P I DG +F S+QED L I S S I +YF+ RA V K +YP + D+R+AV++MD+++ LSL + +RN Y +HD + KN ++LK+ Sbjct: 103 VKCNAPICDIIKVVKPVIRGLVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKLVSKVAKYPHIEDYRRAVQEMDEKEFLSLWLVLSEVRNRYCSLHDIVMKNMEKLKK 238
BLAST of NO24G02110 vs. NCBI_GenBank
Match: KPM03284.1 (proteasome activator complex subunit 3-like protein [Sarcoptes scabiei]) HSP 1 Score: 90.5 bits (223), Expect = 8.000e-15 Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 103 VHVNPEVFALFQRVKGLVLRLVEDLGVLKLFVRLASPAIADG-SFNSSVQEDVLEVISSSRSAGLMVLQHICKYFLERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDKITKNQDRLKQASKPERHSSH 248 V N + L VK L+ +LV+D +LK++V P I DG +F S+QE+ L I + + + +YFL RA + K +YP V DFR+ V ++D+++ +SL V +RN Y +HD +TKN +++K +H+ + Sbjct: 141 VRCNIHIIELIDIVKPLIRQLVDDTNLLKMWVLFLIPRIEDGNNFGVSIQEETLSEIRTVEAEAAAYFDQMSRYFLSRAKIITKIAKYPHVDDFRRNVSEIDEKEFISLRLIVAELRNHYASLHDIVTKNLEKIKTPRPQNQHTMY 286 The following BLAST results are available for this feature:
BLAST of NO24G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G02110 ID=NO24G02110|Name=NO24G02110|organism=Nannochloropsis oceanica|type=gene|length=3623bpback to top protein sequence of NO24G02110.1 >NO24G02110.1-protein ID=NO24G02110.1-protein|Name=NO24G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=251bpback to top Synonyms
Publications
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