NO24G01710, NO24G01710 (gene) Nannochloropsis oceanica

Overview
NameNO24G01710
Unique NameNO24G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length468
Alignment locationchr24:459030..459497 -

Link to JBrowse

Properties
Property NameValue
DescriptionGuanine deaminase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:459030..459497 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR011059Metal-dep_hydrolase_composite
IPR006680Amidohydro_1
Homology
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: EWM24381.1 (guanine deaminase [Nannochloropsis gaditana])

HSP 1 Score: 186.4 bits (472), Expect = 6.600e-44
Identity = 96/148 (64.86%), Postives = 107/148 (72.30%), Query Frame = 0 
Query:    1 MLSAVRSCVIASRVLEDGVEEWRHGEEVDEEGEKIKCERQEKIQNEGMAEGGKEMWCKSGRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVVVVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREVK 149
            MLSA+RSCV+ASR LEDGVEEWR                                 CK GR+GMRIDWKEALWLATMGGA CLGLE+EVGS+ VGKAFDAVR+DVKKGG VVV+EGG DSAEDLV+KWVN GDDRHV+EV+V GRE+K
Sbjct:  380 MLSAIRSCVLASRALEDGVEEWR-----------XXXXXXXXXXXXXXXXXXXXXXCKEGREGMRIDWKEALWLATMGGAECLGLEEEVGSWAVGKAFDAVRVDVKKGGAVVVLEGGGDSAEDLVEKWVNNGDDRHVLEVYVVGREIK 516
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: XP_005855454.1 (guanine deaminase, partial [Nannochloropsis gaditana CCMP526] >EKU20913.1 guanine deaminase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 144.1 bits (362), Expect = 3.800e-31
Identity = 80/148 (54.05%), Postives = 90/148 (60.81%), Query Frame = 0 
Query:    1 MLSAVRSCVIASRVLEDGVEEWRHGEEVDEEGEKIKCERQEKIQNEGMAEGGKEMWCKSGRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVVVVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREVK 149
            MLSA+RSCV+ASR LEDG                                                   EALWLATMGGA CLGLE+EVGS+ VGKAFDAVR+DVKKGG VVV+EGG DSAEDLV+KWVN GDDRHV+EV+V GRE+K
Sbjct:  345 MLSAIRSCVLASRALEDG---------------------------------------------------EALWLATMGGAECLGLEEEVGSWAVGKAFDAVRVDVKKGGAVVVLEGGGDSAEDLVEKWVNNGDDRHVLEVYVVGREIK 441
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: XP_005855543.1 (guanine deaminase, partial [Nannochloropsis gaditana CCMP526] >EKU20809.1 guanine deaminase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 136.3 bits (342), Expect = 7.900e-29
Identity = 76/125 (60.80%), Postives = 83/125 (66.40%), Query Frame = 0 
Query:    1 MLSAVRSCVIASRVLEDGVEEWRHGEEVDEEGEKIKCERQEKIQNEGMAEGGKEMWCKSGRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVVVVEGGRDSAEDLV 126
            MLSA+RSCV+ASR LEDGV           E                         CK GR+GMRIDWKEALWLATMGGA CLGLE+EVGS+ VGKAFDAVR+DVKKGG VVV+EGG DSAEDLV
Sbjct:  242 MLSAIRSCVLASRALEDGV-----------EXXXXXXXXXXXXXXXXXXXXXXXXXCKEGREGMRIDWKEALWLATMGGAECLGLEEEVGSWAVGKAFDAVRVDVKKGGAVVVLEGGGDSAEDLV 355
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: XP_023944745.1 (guanine deaminase [Bicyclus anynana])

HSP 1 Score: 94.4 bits (233), Expect = 3.400e-16
Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 0 
Query:   63 GMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVV----VVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREVKKVNQ 153
            G  I WKEAL+LAT GGA  LGL+D +G+FEVGK+FDA+ ID+    G +        G D+  D VQK+V CGDDR++++ +V G++VK + Q
Sbjct:  346 GPAIGWKEALYLATAGGAKALGLQDRIGTFEVGKSFDALLIDMAVPHGPIDNYSTSSAGTDAIVDKVQKFVYCGDDRNIVQAYVNGKQVKNIQQ 439
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: XP_004931359.1 (guanine deaminase isoform X1 [Bombyx mori] >XP_021207069.1 guanine deaminase isoform X2 [Bombyx mori])

HSP 1 Score: 89.0 bits (219), Expect = 1.400e-14
Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:   60 GRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVV------VVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREVKKV 151
            G D   +DWKEA +LAT+GGA  L L+D++G+FEVGK FDA+ ID    GG +      V E   + A  L+Q+++  GDDR++++V+V G+ VK +
Sbjct:  348 GADNYSLDWKEAFYLATLGGAKALNLDDKIGNFEVGKDFDALLIDAYAPGGPIDEYEYTVDENKEEHAVSLLQRFIYLGDDRNILQVYVKGKSVKTI 444
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: OWR41262.1 (Adenylate cyclase type 10 [Danaus plexippus plexippus])

HSP 1 Score: 85.5 bits (210), Expect = 1.600e-13
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0 
Query:   60 GRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVV---VVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREVKKV 151
            G+    +DWKEA +LAT+GGA  L LED++GSF+VGK FDA+ IDV   GG +     + G  +  +LVQ++V   DDR++ +V+V G  +K V
Sbjct: 1959 GQPHTTLDWKEAFYLATLGGARALRLEDKIGSFDVGKQFDALLIDVYAKGGPIDKYAYDSGEHALVELVQRFVYLADDRNIRQVYVNGETIKNV 2052
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: XP_009537316.1 (hypothetical protein PHYSODRAFT_340799 [Phytophthora sojae] >EGZ07750.1 hypothetical protein PHYSODRAFT_340799 [Phytophthora sojae])

HSP 1 Score: 84.0 bits (206), Expect = 4.600e-13
Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:   59 SGRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVVVVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREV 148
            SG      D+K+A WLATMGGA  L LE++ GSF VGK FDA+ +DV +G  +VV +  RD+  D+ QK ++ GDDR+  +V+V G+ V
Sbjct:  358 SGAPPQPFDFKDAFWLATMGGAKALRLENDTGSFAVGKCFDAILVDVDRGSNLVVSD--RDTPMDVFQKAIHNGDDRNFAKVFVKGKVV 444
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: ORY95044.1 (guanine deaminase-like protein [Syncephalastrum racemosum])

HSP 1 Score: 84.0 bits (206), Expect = 4.600e-13
Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 0 
Query:   66 IDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVVVVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGR 146
            +DW  ALW+AT+GGA CLG++ +VG+FE+GK FDA+ +DV      V V    +  +  ++K+++ GDDR+++ VWV G+
Sbjct:  341 VDWVTALWMATLGGAQCLGIDHKVGTFEIGKDFDALLVDVTVPTSPVDVFTREEPMDRWIEKFIHLGDDRNIVRVWVGGK 420
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: XP_022815537.1 (guanine deaminase [Spodoptera litura])

HSP 1 Score: 84.0 bits (206), Expect = 4.600e-13
Identity = 43/95 (45.26%), Postives = 64/95 (67.37%), Query Frame = 0 
Query:   60 GRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDV-KKGGGVVVVEGGRDS-----AEDLVQKWVNCGDDRHVIEVWVAGREVK 149
            G D   +DWKEA +LAT+GGA  L L+ ++G+F++GK FDA+ +DV  K G +   EG   S     A DL+QK++  GDDR++++V+V G +VK
Sbjct:  350 GNDKYALDWKEAFYLATLGGAKALNLDHKIGNFDIGKDFDALLVDVYTKDGQIDKYEGTLQSTPEEYALDLLQKFIFVGDDRNIVQVYVKGEKVK 444
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BLAST of NO24G01710 vs. NCBI_GenBank
Match: ORY01224.1 (guanine deaminase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 83.6 bits (205), Expect = 6.100e-13
Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 0 
Query:    1 MLSAVRSCVIASRVLEDG-VEEWRHGEEVDEEGEKIKCERQEKIQNEGMAEGGKEMWCKSGRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDAVRIDVKKGGGVVVVEGG-----RDSAEDLVQKWVNCGDDRHVIEVWVAGREVK 149
            MLSA+R  VI SR LE   +EE +  +  D                               ++  ++++KEA WLATMGGA  LG+  +VGSFEVGK+ DA+ ID+        +E        D+ ED  QK+++ GDDR++ E WV GR+V+
Sbjct:  336 MLSAIRQAVITSRFLEVARLEEDKTADTAD-------------------------------KNSHQLNYKEAFWLATMGGAEALGIHRDVGSFEVGKSLDALLIDLSNFEDNQSLENPVELFVYDTIEDAFQKFIHIGDDRNIKETWVQGRKVR 458
The following BLAST results are available for this feature:
BLAST of NO24G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24381.16.600e-4464.86guanine deaminase [Nannochloropsis gaditana][more]
XP_005855454.13.800e-3154.05guanine deaminase, partial [Nannochloropsis gadita... [more]
XP_005855543.17.900e-2960.80guanine deaminase, partial [Nannochloropsis gadita... [more]
XP_023944745.13.400e-1648.94guanine deaminase [Bicyclus anynana][more]
XP_004931359.11.400e-1444.33guanine deaminase isoform X1 [Bombyx mori] >XP_021... [more]
OWR41262.11.600e-1345.74Adenylate cyclase type 10 [Danaus plexippus plexip... [more]
XP_009537316.14.600e-1348.31hypothetical protein PHYSODRAFT_340799 [Phytophtho... [more]
ORY95044.14.600e-1343.75guanine deaminase-like protein [Syncephalastrum ra... [more]
XP_022815537.14.600e-1345.26guanine deaminase [Spodoptera litura][more]
ORY01224.16.100e-1335.71guanine deaminase [Basidiobolus meristosporus CBS ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01710.1NO24G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598600gene_7395Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01710.1NO24G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01710 ID=NO24G01710|Name=NO24G01710|organism=Nannochloropsis oceanica|type=gene|length=468bp
ATGTTAAGTGCAGTGAGATCGTGCGTGATCGCCTCGAGAGTGCTGGAGGA
TGGAGTAGAGGAGTGGAGGCACGGAGAAGAGGTAGACGAGGAGGGGGAAA
AGATAAAATGTGAGCGACAGGAGAAGATACAAAATGAGGGGATGGCGGAG
GGAGGGAAAGAGATGTGGTGTAAATCTGGGAGGGACGGCATGCGGATTGA
TTGGAAAGAGGCTCTGTGGTTGGCGACGATGGGAGGTGCGGGTTGCTTGG
GGCTGGAGGACGAAGTCGGAAGCTTTGAGGTGGGGAAAGCATTTGATGCT
GTTCGAATAGATGTCAAAAAGGGTGGAGGGGTGGTCGTAGTGGAGGGAGG
GCGAGATAGCGCGGAGGATTTGGTCCAGAAGTGGGTAAATTGTGGCGATG
ATAGGCATGTGATTGAGGTGTGGGTGGCCGGGAGGGAGGTCAAGAAAGTC
AACCAACAAGAAAAATAG
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protein sequence of NO24G01710.1

>NO24G01710.1-protein ID=NO24G01710.1-protein|Name=NO24G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=156bp
MLSAVRSCVIASRVLEDGVEEWRHGEEVDEEGEKIKCERQEKIQNEGMAE
GGKEMWCKSGRDGMRIDWKEALWLATMGGAGCLGLEDEVGSFEVGKAFDA
VRIDVKKGGGVVVVEGGRDSAEDLVQKWVNCGDDRHVIEVWVAGREVKKV
NQQEK*
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Synonyms
Publications