NO24G01560, NO24G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01560 vs. NCBI_GenBank
Match: CEL93844.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 421.4 bits (1082), Expect = 3.000e-114 Identity = 198/288 (68.75%), Postives = 233/288 (80.90%), Query Frame = 0 Query: 96 VGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSW 384 VGEDAA FDL+EQSLK+WGIF++LLVTVLGAL+V+WI+P TG G +Y++ L S E V+ L+ IF VAHSGLASLRP E +IGARAWRV+FAL+SLPLA SAI YFINHRYDG QLWDL+ VPG HE VW +S +SF FLYPSTFNLLE+AAV+KP+LH+W +G+MRITRHPQMVGQGLWC AHTLW+GNSF L S LMAHHLFGVW+GD+RLR KYG E + + +TSV+PFAA+ GRQ LP DYWKEF RLPY ++ T+GAY AHPFMQA SW Sbjct: 73 VGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLES--TSDSPEVVMTELMGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAYFINHRYDGVQLWDLRNVPGVHEVVWGLSLVSFFFLYPSTFNLLEVAAVDKPQLHLWESGVMRITRHPQMVGQGLWCLAHTLWIGNSFTLWTSVLLMAHHLFGVWHGDQRLRAKYG-EAFDQVQRRTSVVPFAAVIDGRQRLPDDYWKEFVRLPYAVVLAATLGAYWAHPFMQAYSW 357
BLAST of NO24G01560 vs. NCBI_GenBank
Match: KXZ44175.1 (hypothetical protein GPECTOR_71g536 [Gonium pectorale]) HSP 1 Score: 407.9 bits (1047), Expect = 3.500e-110 Identity = 211/372 (56.72%), Postives = 262/372 (70.43%), Query Frame = 0 Query: 27 LSPARSGQALAL---LAARHNPVLPSASMSRPSSLSALLRSGATQSLPFGQQRA---GSLSSIIMHSTESGGGNLVGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRIT-----RHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 L+PAR Q L L AR P+ + RP L+ L+ + + + G G E+ LVGEDAASFDL++QSL++WG+F LL VLGAL+V WI P GL D+Y+ + + SSE I ++L IF +AHSGLA LRP+ EE+IG RA+RV+FALVSLPLA AI+YFINHRYDG LWD++ +PG HE VW+++F+SF FLYPSTFN+LE+AAV+KPKLH+W TGIMRI RHPQMVGQ +WCAAHTLW+GNSF++V SA LMAHHLFG W+GDRRL+ KYGD EA + +TSV+PFAAI GRQ LPADYWKEFAR PY +T T+GAY AHP MQA S++L W Sbjct: 865 LTPARWQQLLQLEHTREARLRVGAPALPVVRPIRLTQLV---SQRPIIIGSSPVAIPGVACRAAQQEPEATTPQLVGEDAASFDLEKQSLQSWGLFVALLSVVLGALYVVWIQPGFGLADDYLAAIQSL--AGSSEVTITLILLIFAIAHSGLAGLRPYGEEIIGPRAYRVMFALVSLPLAVVAIVYFINHRYDGVPLWDVRGLPGVHELVWVLNFVSFWFLYPSTFNILEVAAVDKPKLHLWETGIMRIRFAGGGRHPQMVGQAIWCAAHTLWIGNSFMVVTSACLMAHHLFGCWHGDRRLKAKYGD-AFEAVKARTSVIPFAAILDGRQQLPADYWKEFARAPYFAVTALTLGAYWAHPLMQAASFSLKW 1230
BLAST of NO24G01560 vs. NCBI_GenBank
Match: GAX73050.1 (hypothetical protein CEUSTIGMA_g503.t1 [Chlamydomonas eustigma]) HSP 1 Score: 397.9 bits (1021), Expect = 3.600e-107 Identity = 185/294 (62.93%), Postives = 232/294 (78.91%), Query Frame = 0 Query: 94 NLVGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 +LVGEDAA+FD++ QSLK+WG+F LL VLG L++ WI P TGL D+Y+Q + + + + E I ++L +F + HSGLA LRP AE++IGARA+RVIFAL SLPLA+ A++YFINHRYDG LWDL+ V G HE VW ++FISF FLYPSTFN+LE+AAV++PKLHMW TGIMRITRHPQMVGQ +WC AHTLW+GNSF +V S LMAHHLFG W+GDRRL KYG E E+ + +TS+ PF AI++GRQ LPADY+KEF R+PY +T+ T+GAYLAHP MQ S+ L W Sbjct: 68 SLVGEDAAAFDVQRQSLKSWGLFFGLLTGVLGLLYLVWIQPGTGLADDYVQTI-KTLSNDNPEGTITLILLVFAIFHSGLAGLRPQAEKLIGARAYRVIFALGSLPLATVALVYFINHRYDGTPLWDLRGVSGIHELVWTLNFISFYFLYPSTFNILEVAAVDEPKLHMWETGIMRITRHPQMVGQAMWCLAHTLWIGNSFTVVTSLGLMAHHLFGCWHGDRRLSSKYG-EAFESVKARTSIAPFQAIWEGRQQLPADYYKEFLRVPYAAVTIFTLGAYLAHPIMQGASYYLGW 359
BLAST of NO24G01560 vs. NCBI_GenBank
Match: GAQ80590.1 (15-cis-zeta-carotene isomerase [Klebsormidium nitens]) HSP 1 Score: 384.4 bits (986), Expect = 4.100e-103 Identity = 186/313 (59.42%), Postives = 229/313 (73.16%), Query Frame = 0 Query: 75 QRAGSLSSIIMHSTESGGGNLVGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 Q A ++ + + + LVGEDA FD+ Q +W FT++L VL L+V WI+P TG G +YI L V G S EA I LL+IF + HSG A+LR AE++IGARA+RV+FA +SLPLA S+++YFINHRYDG QLW L+ VPGAHE VWI+SFISF FLYPSTFNLLE+AAV+KPKLHMW TGI+RITRHPQM GQ LWC AHTLW+GNSF LV S L AHHLFGVW+GD+RL KYGD + +TSV+PF AI +GRQ LP D++KE+ R+PY +I T+GAY +HP MQ GS+ LHW Sbjct: 105 QEASTVPDALAAQSGALADGLVGEDAGVFDVTAQKTSSWVNFTIVLAVVLAILYVVWIDPTTGFGGKYIDALEGAV-GGSHEATIIALLSIFALVHSGGAALRAKAEDIIGARAYRVLFAGLSLPLAVSSVVYFINHRYDGTQLWQLRTVPGAHELVWIVSFISFFFLYPSTFNLLEVAAVDKPKLHMWETGILRITRHPQMTGQLLWCLAHTLWIGNSFTLVTSLGLCAHHLFGVWHGDQRLEAKYGD-AFRTVKARTSVVPFQAIIEGRQKLPQDWYKEYLRVPYFVIVGFTLGAYFSHPLMQQGSFWLHW 415
BLAST of NO24G01560 vs. NCBI_GenBank
Match: XP_020690862.1 (15-cis-zeta-carotene isomerase, chloroplastic [Dendrobium catenatum] >PKU77559.1 15-cis-zeta-carotene isomerase, chloroplastic [Dendrobium catenatum]) HSP 1 Score: 384.0 bits (985), Expect = 5.400e-103 Identity = 185/298 (62.08%), Postives = 227/298 (76.17%), Query Frame = 0 Query: 90 SGGGNLVGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 +G +LVGED+A+F+L EQ L +W FT++L VL AL WINP+TG G +I ++ I S E V+ +L+ IF V HSGLASLR E++IG RA+RV+FA VSLPLA S+I+YFINHRYDG QLW ++ VPG H+ VW+ SFISF FLYPSTFNLLE+AAV+KPK+H+W TGIMRITRHPQMVGQ +WC AHTLW+GNS + AS L+ HHLFGVWNGDRRL +YGD +A + +TS++PFAAI GRQ LP DY KEF RLPY+ IT T+GAY AHP MQA S+ LHW Sbjct: 79 AGDDSLVGEDSAAFELGEQKLASWVYFTVILGAVLFALDALWINPSTGYGAAFISAVSSI--SESPEVVVLILVLIFAVIHSGLASLRDTFEKLIGERAYRVLFAGVSLPLAVSSIVYFINHRYDGTQLWQVQSVPGVHQLVWLSSFISFFFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVAIAASIGLIGHHLFGVWNGDRRLAARYGD-AFDAVKSRTSIVPFAAILDGRQRLPKDYHKEFLRLPYLTITALTLGAYFAHPLMQASSFGLHW 373
BLAST of NO24G01560 vs. NCBI_GenBank
Match: AIU50044.1 (15-cis-zeta-carotene isomerase, partial [Magnolia denudata]) HSP 1 Score: 382.9 bits (982), Expect = 1.200e-102 Identity = 186/292 (63.70%), Postives = 221/292 (75.68%), Query Frame = 0 Query: 96 VGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 VGEDAA FDL EQ L +W FT +L VL AL + WI+P+TG G ++ ++ + H E VI +L+ IF HSGLASLR E+VIG RA+RV+FA +SLPLA S I+YFINHRYDG QLWD+K VPG HE VWI SFISF FLYPSTFNLLE+AAV+KPK+H+W TGIMRITRHPQMVGQ +WC AH LW+GNS V AS L+ HHLFGVWNGDRRL +YG E +A + +TSV+PF AI GRQ LP DY++EF RLPY+ IT T+GAYLAHP MQA S+ LHW Sbjct: 1 VGEDAAVFDLGEQKLSSWIYFTGILGAVLFALNLVWIDPSTGFGTAFVDSVSGLSESH--EVVILILILIFATVHSGLASLRDAGEKVIGERAFRVLFAGISLPLAVSTIVYFINHRYDGIQLWDVKGVPGVHELVWISSFISFFFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHMLWIGNSVVAAASFGLIGHHLFGVWNGDRRLASRYG-EAFDAVKGRTSVIPFVAILDGRQKLPKDYYREFLRLPYLTITFLTLGAYLAHPLMQAASFRLHW 289
BLAST of NO24G01560 vs. NCBI_GenBank
Match: EFJ13919.1 (hypothetical protein SELMODRAFT_13999, partial [Selaginella moellendorffii]) HSP 1 Score: 382.1 bits (980), Expect = 2.000e-102 Identity = 179/293 (61.09%), Postives = 226/293 (77.13%), Query Frame = 0 Query: 95 LVGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 LVGED+A F+L+ Q L +W FT +L V L+ AW++P+TG G Y+ +L+ + +S E VI +L IF + HSGLAS R E++IG RA+RV+FA +SLPLA SA++YFINHRY+GAQLW ++ VPG H+ VW++SF SF FLYPSTFNLLE+AAV+KPKLHMW TGIMRITRHPQMVGQ +WC AHTLW+G+SF L S L+AHHLFGVWNGDRRL +YGD EA ++TSV+PF AI QGRQ LP D++KEF RLPY+IIT T+GAY +HP ++ GS +LHW Sbjct: 1 LVGEDSAVFELQSQKLSSWLYFTAILAAVTVVLYFAWLDPSTGYGTAYVDWLSTLT-NNSPELVITAMLAIFALVHSGLASFRDRGEQLIGERAYRVVFAGLSLPLAVSAVVYFINHRYEGAQLWHVQDVPGVHQLVWLLSFTSFFFLYPSTFNLLEVAAVDKPKLHMWETGIMRITRHPQMVGQFMWCFAHTLWIGSSFTLTTSIGLLAHHLFGVWNGDRRLSLRYGD-AFEAVRQRTSVVPFVAIAQGRQKLPRDFYKEFLRLPYLIITALTLGAYFSHPLLRLGSSSLHW 291
BLAST of NO24G01560 vs. NCBI_GenBank
Match: AIU50049.1 (15-cis-zeta-carotene isomerase, partial [Acorus calamus]) HSP 1 Score: 382.1 bits (980), Expect = 2.000e-102 Identity = 182/292 (62.33%), Postives = 221/292 (75.68%), Query Frame = 0 Query: 96 VGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 VGED+A+F+L EQS+K+W F +L VL AL V WI+P+TG G +++ + S E ++ VL+ IF HSGLASLR E+++G RA+RV+FA SLPLA S I+YFINHRYDG QLW ++ VPG H+FVW+ SFISF FLYPSTFNLLE+AAV+KPKLHMW TGIMRITRHPQMVGQ +WC AHTLW+GNS + AS L+ HHLFGVWNGDRRL +YG E + +TSV+PFAAI GRQ LP DY+KEF RLPY+ IT T+GAYLAHP MQA S+ LHW Sbjct: 1 VGEDSAAFELGEQSIKSWVYFGAILGAVLFALDVVWIDPSTGFGTAFVEAVGGF--SDSPEVMVLVLILIFATVHSGLASLRASCEKLVGERAYRVLFAGTSLPLAVSTIVYFINHRYDGTQLWQVQSVPGVHQFVWVASFISFFFLYPSTFNLLEVAAVDKPKLHMWETGIMRITRHPQMVGQVIWCVAHTLWIGNSVAVAASIGLIGHHLFGVWNGDRRLSLRYG-EAFNVLKSRTSVLPFAAILDGRQKLPKDYFKEFIRLPYLTITFLTLGAYLAHPLMQAASYRLHW 289
BLAST of NO24G01560 vs. NCBI_GenBank
Match: XP_002985044.2 (15-cis-zeta-carotene isomerase, chloroplastic [Selaginella moellendorffii]) HSP 1 Score: 382.1 bits (980), Expect = 2.000e-102 Identity = 179/293 (61.09%), Postives = 226/293 (77.13%), Query Frame = 0 Query: 95 LVGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 LVGED+A F+L+ Q L +W FT +L V L+ AW++P+TG G Y+ +L+ + +S E VI +L IF + HSGLAS R E++IG RA+RV+FA +SLPLA SA++YFINHRY+GAQLW ++ VPG H+ VW++SF SF FLYPSTFNLLE+AAV+KPKLHMW TGIMRITRHPQMVGQ +WC AHTLW+G+SF L S L+AHHLFGVWNGDRRL +YGD EA ++TSV+PF AI QGRQ LP D++KEF RLPY+IIT T+GAY +HP ++ GS +LHW Sbjct: 81 LVGEDSAVFELQSQKLSSWLYFTAILAAVTVVLYFAWLDPSTGYGTAYVDWLSTLT-NNSPELVITAMLAIFALVHSGLASFRDRGEQLIGERAYRVVFAGLSLPLAVSAVVYFINHRYEGAQLWHVQDVPGVHQLVWLLSFTSFFFLYPSTFNLLEVAAVDKPKLHMWETGIMRITRHPQMVGQFMWCFAHTLWIGSSFTLTTSIGLLAHHLFGVWNGDRRLSLRYGD-AFEAVRQRTSVVPFVAIAQGRQKLPRDFYKEFLRLPYLIITALTLGAYFSHPLLRLGSSSLHW 371
BLAST of NO24G01560 vs. NCBI_GenBank
Match: AIU50059.1 (15-cis-zeta-carotene isomerase, partial [Buxus sinica]) HSP 1 Score: 381.3 bits (978), Expect = 3.500e-102 Identity = 181/292 (61.99%), Postives = 225/292 (77.05%), Query Frame = 0 Query: 96 VGEDAASFDLKEQSLKNWGIFTLLLVTVLGALFVAWINPATGLGDEYIQYLNEIVPGHSSEAVIAVLLTIFGVAHSGLASLRPWAEEVIGARAWRVIFALVSLPLASSAIIYFINHRYDGAQLWDLKLVPGAHEFVWIISFISFLFLYPSTFNLLEIAAVEKPKLHMWATGIMRITRHPQMVGQGLWCAAHTLWMGNSFVLVASAFLMAHHLFGVWNGDRRLRDKYGDEVMEAFEEQTSVMPFAAIFQGRQVLPADYWKEFARLPYVIITLGTIGAYLAHPFMQAGSWTLHW 388 VGED+A F+L +Q + +W FT +L TVL AL V WI+ +TG G ++ + + H E + +L+ IF +AHSGLASLR E++IG RA+RV+FA +SLPLA S I+YFINHRYDG QLW L+ VPG H+ VWI+SF+SFLFLYPSTFNLLE+AAV+KPK+H+W TGIMRITRHPQMVGQ +WC AHT+W+GNS V+ AS L+AHHLFGVWNGDRRL +YG E E + +TSV+PFAAI GRQ LP DY+KEF RLPY+ IT T+GAYL+HP MQA S+ LHW Sbjct: 1 VGEDSAVFELGKQKISSWVYFTGILGTVLFALNVVWIDSSTGFGTTFVDAVEGLSESH--EVAMLILIFIFAIAHSGLASLRDSGEKLIGERAYRVLFAGLSLPLALSTIVYFINHRYDGVQLWQLQSVPGVHQLVWILSFVSFLFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQAMWCLAHTVWIGNSVVVAASLGLIAHHLFGVWNGDRRLALRYG-EAFEIVKHRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITAVTLGAYLSHPLMQAASFNLHW 289 The following BLAST results are available for this feature:
BLAST of NO24G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01560 ID=NO24G01560|Name=NO24G01560|organism=Nannochloropsis oceanica|type=gene|length=2116bpback to top protein sequence of NO24G01560.1 >NO24G01560.1-protein ID=NO24G01560.1-protein|Name=NO24G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
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