NO24G01440, NO24G01440 (gene) Nannochloropsis oceanica

Overview
NameNO24G01440
Unique NameNO24G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1619
Alignment locationchr24:385347..386965 -

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Properties
Property NameValue
DescriptionPhytanoyl-dioxygenase domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:385347..386965 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0051213dioxygenase activity
Homology
BLAST of NO24G01440 vs. NCBI_GenBank
Match: EWM24347.1 (phytanoyl- dioxygenase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 305.8 bits (782), Expect = 1.500e-79
Identity = 182/442 (41.18%), Postives = 217/442 (49.10%), Query Frame = 0
Query:    7 DAASAAAFKEQMASLQKRSAATLKLGPPAWLTHPHCTEGPLNADELHSFFH-------------------DD-----------------------------------------------------------------------------------------------SSVVPWHQDAAYLDPESAHTL---------------------------------QVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHV------------QEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTA 290
            D A + AF++Q+ +L+ RSAAT+ + PP WLT P+ T+GPLN  EL  FF                    DD                                                                                               SSVVPWHQDAAYLDPE+A TL                                 QVTAWIP ++A A NGCLQV+R AH++G+TA+HTCC GGTWYV+MD+DDASSRLG++C DE  W+TCEVPLGSVLFLSNLIPHRSL N S  IRWS+DLRWQDA +P GFWGIKD VLM    REGGKE    E ++V WD FLAVDRG+AQS+AAA A                          + V AA    +D L PVI+GPWMLRW++ +HNAHTA
Sbjct:    5 DNAGSFAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPVMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLM----REGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGXXXXXXXXXXXXXXXXXXXXXXDMVLAAXXXXSDALTPVISGPWMLRWDLVHHNAHTA 442          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_005854538.1 (phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526] >EKU21820.1 phytanoyl- dioxygenase domain-containing 1-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 285.4 bits (729), Expect = 2.100e-73
Identity = 173/434 (39.86%), Postives = 206/434 (47.47%), Query Frame = 0
Query:    7 DAASAAAFKEQMASLQKRSAATLKLGPPAWLTHPHCTEGPLNADELHSFFH-------------------DD-----------------------------------------------------------------------------------------------SSVVPWHQDAAYLDPESAHTL---------------------------------QVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHV------------QEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEI 282
            D A + AF++Q+ +L+ RSAAT+ + PP WLT P+ T+GPLN  EL  FF                    DD                                                                                               SSVVPWHQDAAYLDPE+A TL                                 QVTAWIP ++A A NGCLQV+R AH++G+TA+HTCC GGTWYV+MD+DDASSRLG++C DE  W+TCEVPLGSVLFLSNLIPHRSL N S  IRWS+DLRWQDA +P GFWGIKD VLM    REGGKE    E ++V WD FLAVDRG+AQS+AAA A                            V       +D   PVI+GPWMLRW++
Sbjct:    5 DNAGSCAFEKQIQTLKTRSAATMNVDPPPWLTRPYSTQGPLNKKELDHFFQEGYLIKRDVFAPSELQPAMDDIDSQVDALAHKLLQAGRITDVCPSLGFYRRMAAIEAQCPGASVLLHKNPDLPPSFRALWSDPRLLDIAQQLLGGPSVPVAGHPVWNLRVKVPQTASSVVPWHQDAAYLDPEAAATLEVASRLSPPPYLPATPDFSLSSPTPSVLPFSSSQVTAWIPLLDANAANGCLQVMRRAHQSGRTARHTCCVGGTWYVEMDLDDASSRLGMDCRDESFWDTCEVPLGSVLFLSNLIPHRSLPNVSAHIRWSIDLRWQDAREPAGFWGIKDMVLM----REGGKEGGTREGYLVDWDGFLAVDRGEAQSQAAARAKRAGXXXXXXXXXXXXXXXXXXXXXXXMVXXXXXXXSDASTPVISGPWMLRWDL 434          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_002603086.1 (hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae] >EEN59097.1 hypothetical protein BRAFLDRAFT_63281 [Branchiostoma floridae])

HSP 1 Score: 236.1 bits (601), Expect = 1.500e-58
Identity = 119/253 (47.04%), Postives = 156/253 (61.66%), Query Frame = 0
Query:   58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311
            ++   VPWHQD AYL P S  TLQ TAWIP ++AT +NGC+Q++RG H+ G TA H CCAGGTWYV++  +D    LG  C  E +  TCEVP G VLFL+N +PHRSL N S +IRWS+DLRWQD  +P+GFWG ++HVLMR         +EE+  +   WD F+ V +            H++ +E  K  G+E+         DE  P I GPWMLRW+I +HN HT  +EE     G D + ++WHKA
Sbjct:  163 NEQVTVPWHQDNAYLQPPSLGTLQPTAWIPLLDATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLG--CDLENDIVTCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR---------TEEDPGYKPVWDGFVDVSK------------HIRYEEIMK--GEEQ-----EHNEDEFDPTIQGPWMLRWKIVHHNRHTKGIEE-----GHDKM-STWHKA 379          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_002603083.1 (hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae] >EEN59094.1 hypothetical protein BRAFLDRAFT_63284 [Branchiostoma floridae])

HSP 1 Score: 235.7 bits (600), Expect = 1.900e-58
Identity = 119/253 (47.04%), Postives = 155/253 (61.26%), Query Frame = 0
Query:   58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311
            ++   VPWHQD AYL P S  TLQ TAWIP +NAT +NGC+Q++RG H+ G TA H CCAGGTWYV++  +D    LG  C  E +  TCEVP G VLFL+N +PHRSL N S +IRWS+DLRWQD  +P+GFWG ++HVLMR         + E+  +   WD F+ V +            H++ +E  K  G+E+         DE  P I GPWMLRW+I +HN HT  +EE     G D + ++WHKA
Sbjct:  163 NEQVTVPWHQDNAYLQPPSLGTLQPTAWIPLLNATKKNGCMQIMRGGHKKGITAPHVCCAGGTWYVELSEEDMEKTLG--CDLENDIVTCEVPYGGVLFLNNCVPHRSLENYSDEIRWSLDLRWQDPAKPSGFWGDREHVLMR---------TAEDPGYKPVWDGFVDVSK------------HIRYEEIMK--GEEQ-----EHNEDEFDPTIQGPWMLRWKIVHHNRHTKGIEE-----GHDKM-STWHKA 379          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019628497.1 (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Branchiostoma belcheri])

HSP 1 Score: 235.3 bits (599), Expect = 2.500e-58
Identity = 120/253 (47.43%), Postives = 151/253 (59.68%), Query Frame = 0
Query:   58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGEDAVPASWHKA 311
            ++   VPWHQD AYL P S  TLQ TAWIP +NAT  NGC+Q++RG H+ G TA H CCAGGTWYV++  DD    LG  C  + +  TCEVP G VLFL+N +PHRSL N+S DIRWS+DLRWQD  +P+GFWG K  VLMR         +EE+  +   W+ F  V +            H Q D+  K+  +E       A  DE  P I GPWMLRW+I +HN HT      G E G + + ++WHKA
Sbjct:  163 NEQVTVPWHQDNAYLQPPSLGTLQPTAWIPLLNATRENGCMQIVRGGHKKGITAPHVCCAGGTWYVELAEDDMEKTLG--CDMKKDVVTCEVPYGGVLFLNNCVPHRSLENNSNDIRWSLDLRWQDPAKPSGFWGDKKPVLMR---------TEEDPGYKPVWEGFADVSK------------HTQYDDKMKDTDQE-------ANDDEFDPTIQGPWMLRWKIVHHNRHTK-----GLETGHNTI-STWHKA 379          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_005647135.1 (hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169] >EIE22591.1 hypothetical protein COCSUDRAFT_47613 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 231.9 bits (590), Expect = 2.700e-57
Identity = 119/240 (49.58%), Postives = 143/240 (59.58%), Query Frame = 0
Query:   59 DSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEG 299
            + + VPWHQD  YL PES   LQVTAWIP + AT RNGC+QVIRG HR GKT KH+CC GGTWYVQMD +DA   LGV+     +  TCEVP GSVLFL+NLIPHRSL N S  IRWS+DLRWQ    P GF+G+KD + M +    G         +   W ++ + DR   Q KAA +A  + E            +A VA    EL   I+GPWM RWE+ +HN H A      A G
Sbjct:  149 EQATVPWHQDNGYLHPESWEVLQVTAWIPMLTATPRNGCMQVIRGGHRAGKTVKHSCCVGGTWYVQMDEEDAERELGVDM--AADVVTCEVPFGSVLFLNNLIPHRSLDNMSDQIRWSLDLRWQRPGLPNGFYGLKDCITMAKSGEPG---------YAPDWTDWGSQDRTPMQ-KAAISADKIAE---------VTAAADVAQADKELDTTISGPWMDRWELVHHNRHVAAHLAANAAG 367          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019644504.1 (PREDICTED: phytanoyl-CoA dioxygenase-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 231.1 bits (588), Expect = 4.700e-57
Identity = 118/234 (50.43%), Postives = 143/234 (61.11%), Query Frame = 0
Query:   58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292
            +++  VPWHQD AYL P+   TLQ TAWIP ++AT +NGC+QV++G HR G TA HTCCAGGTWYV++  ++    LG  C  E +  TCEVP G VLFL+N IPHRSL N S +IRWS+DLRWQD N+P+GFWG KD VLMR     G K          RW+EFL  D G              E+EDGK                +L+P I GPWMLRWEI +HN HT  L
Sbjct:  163 NEALTVPWHQDNAYLLPDCLGTLQPTAWIPLLDATKKNGCMQVLKGGHRKGITATHTCCAGGTWYVEVSAEEMEKTLG--CDMERDLVTCEVPYGGVLFLNNCIPHRSLENYSDEIRWSLDLRWQDPNKPSGFWGEKDLVLMRTAKDPGYKP---------RWEEFLH-DEG--------------EEEDGK------------VNPADLEPTIQGPWMLRWEIVHHNRHTKAL 358          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_003388895.1 (PREDICTED: phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [Amphimedon queenslandica])

HSP 1 Score: 228.8 bits (582), Expect = 2.300e-56
Identity = 118/262 (45.04%), Postives = 147/262 (56.11%), Query Frame = 0
Query:   32 GPPAWLTHPHCTEGPLNADELHSFFHDDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEE 294
            G P W   P   + P+N          + + VPWHQD AY   ES HT   TAWIPFI+A   NGC+QV++G HR GKTA HTCCAG TWYV +  ++    LGVN   + +  TCEVPLG VLFL+N IPHRSL N S  IRWS+DLRWQD  +P+GF GIKD +LMR         +E++ N+ + W++F   DR  AQ ++                G EE         DE    + G WM RW ITNHN HT  L +
Sbjct:  156 GSPGWNLRP---KTPVN----------EQTTVPWHQDNAYFYEESLHTFIATAWIPFIDANMTNGCMQVVKGGHRAGKTATHTCCAGSTWYVDLAEEEMEKTLGVNM--KTDVVTCEVPLGGVLFLNNCIPHRSLENFSDKIRWSIDLRWQDPKKPSGFEGIKDPILMR---------TEQDPNYQIDWEDFATTDRNTAQKESL---------------GIEE---------DEFDTTVHGQWMSRWPITNHNRHTEALRK 369          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_003388894.1 (PREDICTED: uncharacterized protein LOC100640001 isoform X1 [Amphimedon queenslandica])

HSP 1 Score: 220.7 bits (561), Expect = 6.300e-54
Identity = 105/234 (44.87%), Postives = 135/234 (57.69%), Query Frame = 0
Query:   58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292
            ++ + VPWHQD AYLD     T Q TAWIPFI+A   NGC+QV++G HR GKTA HTCCAGGTWYV +  ++    LGVN   + +  TCEVPLG VLF +N +PHRSL N S ++RWS+DLRWQD N+  GF+ +K  +LMR  S         + N+ + W+EF   DR K Q +                        ++    +E    + GPWM RW ITNHN HT  L
Sbjct:  172 NEETTVPWHQDNAYLDETCLTTHQATAWIPFIDANKLNGCVQVVKGGHRAGKTATHTCCAGGTWYVDLAEEEMEKTLGVNM--KTDVVTCEVPLGGVLFFNNCVPHRSLENYSDNVRWSLDLRWQDPNKSPGFYNLKQPILMRTAS---------DPNYKIEWEEFATADRNKIQKE------------------------SLGIDENEFDTTVHGPWMKRWPITNHNRHTKAL 370          
BLAST of NO24G01440 vs. NCBI_GenBank
Match: XP_019855953.1 (PREDICTED: uncharacterized protein LOC100640001 isoform X2 [Amphimedon queenslandica])

HSP 1 Score: 220.7 bits (561), Expect = 6.300e-54
Identity = 105/234 (44.87%), Postives = 135/234 (57.69%), Query Frame = 0
Query:   58 DDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQVIRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVPLGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMRRGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKEGGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAEL 292
            ++ + VPWHQD AYLD     T Q TAWIPFI+A   NGC+QV++G HR GKTA HTCCAGGTWYV +  ++    LGVN   + +  TCEVPLG VLF +N +PHRSL N S ++RWS+DLRWQD N+  GF+ +K  +LMR  S         + N+ + W+EF   DR K Q +                        ++    +E    + GPWM RW ITNHN HT  L
Sbjct:  171 NEETTVPWHQDNAYLDETCLTTHQATAWIPFIDANKLNGCVQVVKGGHRAGKTATHTCCAGGTWYVDLAEEEMEKTLGVNM--KTDVVTCEVPLGGVLFFNNCVPHRSLENYSDNVRWSLDLRWQDPNKSPGFYNLKQPILMRTAS---------DPNYKIEWEEFATADRNKIQKE------------------------SLGIDENEFDTTVHGPWMKRWPITNHNRHTKAL 369          
The following BLAST results are available for this feature:
BLAST of NO24G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24347.11.500e-7941.18phytanoyl- dioxygenase domain-containing protein [... [more]
XP_005854538.12.100e-7339.86phytanoyl- dioxygenase domain-containing 1-like pr... [more]
XP_002603086.11.500e-5847.04hypothetical protein BRAFLDRAFT_63281 [Branchiosto... [more]
XP_002603083.11.900e-5847.04hypothetical protein BRAFLDRAFT_63284 [Branchiosto... [more]
XP_019628497.12.500e-5847.43PREDICTED: phytanoyl-CoA dioxygenase domain-contai... [more]
XP_005647135.12.700e-5749.58hypothetical protein COCSUDRAFT_47613 [Coccomyxa s... [more]
XP_019644504.14.700e-5750.43PREDICTED: phytanoyl-CoA dioxygenase-like isoform ... [more]
XP_003388895.12.300e-5645.04PREDICTED: phytanoyl-CoA dioxygenase domain-contai... [more]
XP_003388894.16.300e-5444.87PREDICTED: uncharacterized protein LOC100640001 is... [more]
XP_019855953.16.300e-5444.87PREDICTED: uncharacterized protein LOC100640001 is... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002850NSK002850Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01440.1NO24G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|652298gene_7368Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100105g18gene6127Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01440.1NO24G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01440 ID=NO24G01440|Name=NO24G01440|organism=Nannochloropsis oceanica|type=gene|length=1619bp
ATGGTTAGCAGCAGGAGTGATGCGGCCTCCGCAGCGGCTTTCAAGGAGCA
AATGGCATCTCTCCAGAAACGCAGCGCGGCTACCCTGAAACTTGGCCCGC
CCGCTTGGCTCACGCATCCTCATTGCACGGAAGGGCCCTTGAACGCCGAC
GAGgcaggttactacggaaagagaggaagtgatcccggtgcatattttta
gtcgaagctcgtaacctcctctctatctctctcgcacctctcatgtgaca
gCTCCATAGCTTCTTCCACGACGgttttctcatcaaacatggcctctttg
cccccgccgagcttcgacctgtcatgaacgacatcgaaaaacaagtcgac
tccctagcgtccacccttctctctgccgggctgatcgccgactctgcccc
ttccctcggattctaccagcgcatggcagctctcgagaagcaatttccag
gggccagcgtcctcttgcacaagacacccgcccttcctccatccttccaa
tcgctctggactgacaatcgcttgcttgatatcgcgcagcaattgttggg
ggtcgggatatagatgtggctggtcaccctgtctggaatttacgcgttaa
agtgccacaaacagACTCGTCAGTCGTGCCTTGGCATCAAGACGCGGCGT
ACCTCGACCCCGAATCCGCACATACTTTGCAGgtaggctagtgctccttc
ctttccttccgcccctcctaccttctattatttccccttttctcagtcgt
gtcgatgtcctccctccctccctctctccttccctctctccctccctccc
tctctgcatagGTCACGGCATGGATCCCTTTTATCAATGCCACAGCTCGT
AATGGCTGTTTGCAAGTGATCAGAGGCGCGCACCGCACGGGGAAAACAGC
CAAGCATACATGCTGTGCGGGGGGTACGTGGTATGTGCAGATGGACATGG
ACGATGCGTCCTCGCGGCTGGGAGTTAATTGCCACGACGAAGGAGAATGG
GAGACATGTGAAGTACCTTTAGGGTCGGTACTTTTTCTCAGgtacagctt
attttttcgattgtttattttctcttctcccctgcagccagcaagcttac
acttcctccctttccttcctccctcccaccccccattcctccctctctcc
ctccttcagCAATTTGATCCCTCATCGTTCGCTTGCAAACAGTTCTCCTG
ACATTCGATGGAGCGTGGACTTACGATGGCAGGACGCAAACCAACCCACC
GGGTTCTGGGGCATTAAAGACCATGTCCTGATGAGGAGGGGATCGAGGGA
GGGAGGGAAGGAGAGCGAGGAGGAGGAGAACTTCATGGTGCGTTGGGATG
AGTTTCTGGCGGTGGACCGTGGGAAAGCTCAGAGTAAGGCAGCCGCGAAT
GCAACACATGTACAGGAGGACGAGGACGGAAAGGAGGGTGGGAAGGAGGA
GGTTTCAGCAGCAGTGGCGGCCGGGGCGGATGAGTTAAAGCCAGTGATTG
CAGGTCCATGGATGCTGCGATGGGAGATTACGAATCACAATGCGCACACT
GCGGAGTTGGAAGAGGTGGGGGCGGAGGGAGGAGAGGACGCAGTGCCGGC
ATCGTGGCATAAGGCGTGA
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protein sequence of NO24G01440.1

>NO24G01440.1-protein ID=NO24G01440.1-protein|Name=NO24G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MVSSRSDAASAAAFKEQMASLQKRSAATLKLGPPAWLTHPHCTEGPLNAD
ELHSFFHDDSSVVPWHQDAAYLDPESAHTLQVTAWIPFINATARNGCLQV
IRGAHRTGKTAKHTCCAGGTWYVQMDMDDASSRLGVNCHDEGEWETCEVP
LGSVLFLSNLIPHRSLANSSPDIRWSVDLRWQDANQPTGFWGIKDHVLMR
RGSREGGKESEEEENFMVRWDEFLAVDRGKAQSKAAANATHVQEDEDGKE
GGKEEVSAAVAAGADELKPVIAGPWMLRWEITNHNAHTAELEEVGAEGGE
DAVPASWHKA*
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Synonyms
Publications