NO24G00890, NO24G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_005853569.1 (CDP-diacylglycerol-inositol 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526] >EKU22790.1 CDP-diacylglycerol-inositol 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 192.2 bits (487), Expect = 2.200e-45 Identity = 105/170 (61.76%), Postives = 125/170 (73.53%), Query Frame = 0 Query: 71 ATFYATQVS-NTGLLPHAANTLLGKGLDHLSAALVDDGNRQKANNSNGTAFLRSAEPDLLAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALG 240 AT YA TGLL A TLLGK L S+AL+ D R +A ++ T L + EPDLLAAL+VF+ ALD LDG ARR+ Q S+LGA+LD+ ADNVLR CMWVSSALLDAR ALPAL+C+SVEW TLLA+QL+ RE GRHWK LR ++P +V+YFFSNNFRN LG Sbjct: 2 ATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMER-RAGSTGETEALPTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCMWVSSALLDARTALPALICISVEWLTLLASQLLQHREQGRHWKKLRTSEPWVVRYFFSNNFRNVLG 170
BLAST of NO24G00890 vs. NCBI_GenBank
Match: EWM21096.1 (CDP-alcohol phosphatidyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 156.4 bits (394), Expect = 1.300e-34 Identity = 92/163 (56.44%), Postives = 114/163 (69.94%), Query Frame = 0 Query: 14 RLPVLLYIPNLICYSRLVLSFYGLSIVAHTVTRQQEDARHAAHDG-GSSCSVQAMMQTATFYATQVS-NTGLLPHAANTLLGKGLDHLSAALVDDGNRQKANNSNGTAFLRSAEPDLLAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCM 175 RLPVLLY+PNL+CY+RL+LS YGLS+V TV RQQE +R A G ++CSVQA++Q AT YA TGLL A TLLGK L S+AL+ D R +A + T L + EPDLLAAL+VF+ ALD LDG ARR+ Q S+LGA+LD+ ADNVLR C+ Sbjct: 31 RLPVLLYVPNLLCYARLLLSIYGLSMVIQTVLRQQEASRRALLAGEAANCSVQAVVQMATHYAAHAGYTTGLLAPIATTLLGKALAQASSALLRDMER-RAGGAGETEALSTVEPDLLAALVVFLAAGALDLLDGVAARRMKQCSRLGALLDVVADNVLRGCI 192
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_005838811.1 (hypothetical protein GUITHDRAFT_102442 [Guillardia theta CCMP2712] >EKX51831.1 hypothetical protein GUITHDRAFT_102442 [Guillardia theta CCMP2712]) HSP 1 Score: 115.2 bits (287), Expect = 3.400e-22 Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = 0 Query: 123 SAEPDLLAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAPSTPCSSMQSPRLAT 265 + P ++L V +++ LD +DG +ARRL QTS+LGA+LDI ADN+ RS +W ++ A + A+ +S+EW TL ATQ+ E GRHWK +P +V+ +F NNF+N LG GI LFL P+ Q P +A+ Sbjct: 28 AVSPPSFSSLAVLLLSFILDLVDGMLARRLGQTSKLGAILDILADNLGRSAVWAKASGRSASVHAFAVFFISLEWVTLFATQMTSHLEGGRHWKQQTSEEPWMVRAYFKNNFKNPLGTSGILGLFLLPTYIFIDSQFPSIAS 169
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_002177371.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51834.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 114.0 bits (284), Expect = 7.600e-22 Identity = 55/117 (47.01%), Postives = 80/117 (68.38%), Query Frame = 0 Query: 131 ALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLF 248 A +++++ +LD +DG +AR L QTS+ G +LDI ADN+LRSC+WV++A+ + +P+ + L +EW T+LATQL + HWK R DP +Q FF+NNFRN LG+ GI LF Sbjct: 35 AFSLWILSASLDLIDGILARALKQTSKFGVLLDIGADNILRSCVWVAAAVSNPAYLIPSTIILCLEWCTMLATQLHAEAHRS-HWKNARQKDPIFIQAFFANNFRNPLGLLGIYGLF 150
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_008306892.1 (PREDICTED: uncharacterized protein LOC103377748 [Cynoglossus semilaevis] >XP_008306893.1 PREDICTED: uncharacterized protein LOC103377748 [Cynoglossus semilaevis] >XP_016887503.1 PREDICTED: uncharacterized protein LOC103377748 [Cynoglossus semilaevis] >XP_016887504.1 PREDICTED: uncharacterized protein LOC103377748 [Cynoglossus semilaevis]) HSP 1 Score: 77.8 bits (190), Expect = 6.100e-11 Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 0 Query: 132 LLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAP 251 +L++++ + LD +DG++ARRL QTS+ GA LD+ DN+ R +W +L L +VEW + G HWK + P L+Q +N FR+ALG+W + L P Sbjct: 35 VLIYLVFIVLDGVDGWLARRLGQTSKFGAWLDVVVDNLGRGMLW-------GQLFKWGWLVSAVEWCVFVCN----HSSRGDHWKSSFTSSPPLIQAIMANGFRSALGLWVVSGLHCLP 142
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_011617280.1 (PREDICTED: uncharacterized protein LOC105418711 [Takifugu rubripes]) HSP 1 Score: 77.4 bits (189), Expect = 7.900e-11 Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 0 Query: 119 AFLRSAEPDLLAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAP 251 A+ S P + L + + +ALD +DG++ARRL+Q+S+ GA LD+ DNV R +W +RL L +VEW + G HWK A PR VQ +N FR LG+W + L P Sbjct: 24 AWAASETPSVFVPL--YSVFIALDGVDGWLARRLDQSSRFGAWLDVVVDNVGRGMLW-------SRLFKWGWLVSTVEWCVFVCN----HNARGDHWKDSFAASPRFVQAVMANGFRTPLGLWVVSGLHCLP 142
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_024113856.1 (uncharacterized protein LOC112136403 isoform X2 [Oryzias melastigma]) HSP 1 Score: 77.0 bits (188), Expect = 1.000e-10 Identity = 43/137 (31.39%), Postives = 69/137 (50.36%), Query Frame = 0 Query: 129 LAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAPSTPCSSMQSPRLATW 266 +A L +++++ ALD +DG++ARRL Q S+ GA LD+ DN+ R +W +RL L ++EW + G WK D+ PRL++ +N F LG+W + L L P + ++ L W Sbjct: 32 VAFLWLYLVSAALDGVDGWLARRLRQRSRFGAWLDVVVDNLSRGMLW-------SRLFEWGWLVSAMEWCAFVCN----HSSRGEQWKASFDSSPRLIRAIMANGFYTPLGLWVVSGLHLLPVWLYACQEAIDLPLW 157
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_024113855.1 (uncharacterized protein LOC112136403 isoform X1 [Oryzias melastigma]) HSP 1 Score: 77.0 bits (188), Expect = 1.000e-10 Identity = 43/137 (31.39%), Postives = 69/137 (50.36%), Query Frame = 0 Query: 129 LAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAPSTPCSSMQSPRLATW 266 +A L +++++ ALD +DG++ARRL Q S+ GA LD+ DN+ R +W +RL L ++EW + G WK D+ PRL++ +N F LG+W + L L P + ++ L W Sbjct: 54 VAFLWLYLVSAALDGVDGWLARRLRQRSRFGAWLDVVVDNLSRGMLW-------SRLFEWGWLVSAMEWCAFVCN----HSSRGEQWKASFDSSPRLIRAIMANGFYTPLGLWVVSGLHLLPVWLYACQEAIDLPLW 179
BLAST of NO24G00890 vs. NCBI_GenBank
Match: XP_020504690.1 (uncharacterized protein LOC109995351 [Labrus bergylta]) HSP 1 Score: 76.3 bits (186), Expect = 1.800e-10 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 0 Query: 132 LLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAP 251 + + I++ALD +DG++ARRL QTS+ GA LD+ DNV R +W + L L +VEW + G HWK + PRL++ N FR LG+W + L P Sbjct: 35 IFFYSISIALDGVDGWLARRLGQTSRFGAWLDVVVDNVGRGMLW-------SLLFKWGWLMSAVEWCVFVCN----HNARGDHWKNSFSSSPRLIRAIMDNGFRTPLGLWVVSGLHCLP 142
BLAST of NO24G00890 vs. NCBI_GenBank
Match: ELT87632.1 (hypothetical protein CAPTEDRAFT_132044, partial [Capitella teleta]) HSP 1 Score: 75.5 bits (184), Expect = 3.000e-10 Identity = 43/122 (35.25%), Postives = 64/122 (52.46%), Query Frame = 0 Query: 129 LAALLVFVINVALDSLDGYVARRLNQTSQLGAMLDIFADNVLRSCMWVSSALLDARLALPALLCLSVEWATLLATQLVVQREDGRHWKMLRDADPRLVQYFFSNNFRNALGMWGIGSLFLAP 251 L ++ ++ + LD++DG++AR+LNQTS GA D+ DN+ R +W R L S+EW T T + G WK + DP LV+ +NNFRN G+ +GSL + P Sbjct: 22 LLSISLYCSSAFLDAVDGFLARKLNQTSAFGAWFDVVIDNLGRGMIW-------CRTYHIGYLVSSLEWMTFACT-----HQRGASWKGVNQRDPWLVRAVMANNFRNLCGVMSVGSLHVLP 131 The following BLAST results are available for this feature:
BLAST of NO24G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00890 ID=NO24G00890|Name=NO24G00890|organism=Nannochloropsis oceanica|type=gene|length=855bpback to top protein sequence of NO24G00890.1 >NO24G00890.1-protein ID=NO24G00890.1-protein|Name=NO24G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top Synonyms
Publications
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