NO23G01850, NO23G01850 (gene) Nannochloropsis oceanica

Overview
NameNO23G01850
Unique NameNO23G01850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2421
Alignment locationchr23:667217..669637 +

Link to JBrowse

Properties
Property NameValue
DescriptionOxidoreductase nad-binding domain-containing protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:667217..669637 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR017938Riboflavin_synthase-like_b-brl
IPR017927Fd_Rdtase_FAD-bd
IPR001433OxRdtase_FAD/NAD-bd
IPR001221Phe_hydroxylase
Homology
BLAST of NO23G01850 vs. NCBI_GenBank
Match: EWM27838.1 (oxidoreductase nad-binding domain-containing protein 1 precursor [Nannochloropsis gaditana])

HSP 1 Score: 383.6 bits (984), Expect = 6.300e-103
Identity = 206/378 (54.50%), Postives = 252/378 (66.67%), Query Frame = 0
Query:    5 MQRRAILSPLLSSATPIAASRHLRHCPCCHXXXXXXXXXASLPSP--------LPDDPSLTRAYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLPLLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEE------------XXXXXXXXXXXXXXXXXXIEKD-----KGRFQVSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTREL--------GGEGAWDGRRE--RMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGG-EEEGMEGGR-RLRKAQVVTEKWW 346
            MQRRA+L P+L+S+T    SRHLRHC CCH         +S P+P        LPDDPS+T A +T IHTLSP+VRQLDL +LC K    R PFSF+AGQWVD +VP+L HCGGFSM+S PE LP LSLAIKGS  SRS+HARWAH++    EGDVVGLRVGGGFHFQMTE HW++GTRL L AGGVGINP+MSILAHVV W+E                               +E++     +  F+V+L+YSAA RAEL+FEEQI++W + H+ W +VLFIVTRE         GGEG     RE  RMD  ++W+AVEG EG RGR+KALVY+CGP+ M D++E +L+G  + EG   GR  L  +QVV EKWW
Sbjct:   35 MQRRAVLKPVLASST--YPSRHLRHCSCCHHTSSTPSLHSSSPAPAENRPSASLPDDPSITHACVTGIHTLSPTVRQLDLRLLCNKELPARDPFSFVAGQWVDFFVPSLPHCGGFSMVSPPEILPRLSLAIKGSSLSRSLHARWAHST--VAEGDVVGLRVGGGFHFQMTEAHWVEGTRLTLFAGGVGINPMMSILAHVVSWIERKEVKSKEGREEGERLTGEGALDDRIARGLGVEENCAVRVQAPFRVALVYSAATRAELLFEEQIQKWAEQHSEWFTVLFIVTREKGEGKEREGGGEGGQLRYREGSRMDEKVIWDAVEGGEGIRGRKKALVYVCGPAKMIDDVEDMLLGKLKAEGAREGRCCLEASQVVAEKWW 408          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: XP_013413750.1 (oxidoreductase NAD-binding domain-containing protein 1 [Lingula anatina])

HSP 1 Score: 138.3 bits (347), Expect = 4.600e-29
Identity = 98/289 (33.91%), Postives = 146/289 (50.52%), Query Frame = 0
Query:   59 AYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLPLLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHF--QMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQVSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            A +  +  +SP+V+QL LH+        R  F+F AGQWVD ++P+++  GGFS+ S+P++L    +   G  AS    A W H     KEGD V +R GG F++  Q  EE     T L+L+AGGVG NP+ SIL H V    E                     D+ R +V L+YS++ R EL++ + IKE     +S +   F VT++   + +   R  R+    V EA+E    +   EK L YICGPS M++ +E  L+            + K +++ EKWW
Sbjct:   54 AVVNEVKHISPTVKQLKLHV-------KRKDFTFKAGQWVDFFIPDVKTVGGFSISSAPKTLKDEGVIKLGVKASDHPPAHWVHNK--CKEGDAVSVRAGGDFYYDPQTAEEQ----TDLLLVAGGVGKNPIYSILQHFVNLQLEYC-------------------DRER-KVVLLYSSSAREELLYRDHIKELAD-KSSNIFYKFFVTQQPENKESTHMRNGRIGEDDVTEALE----KLNTEKLLCYICGPSTMSNAVEGFLLNS---------GVPKNKIMYEKWW 295          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: XP_021948245.1 (oxidoreductase NAD-binding domain-containing protein 1-like [Folsomia candida] >OXA57560.1 Oxidoreductase NAD-binding domain-containing protein 1 [Folsomia candida])

HSP 1 Score: 117.9 bits (294), Expect = 6.400e-23
Identity = 88/303 (29.04%), Postives = 142/303 (46.86%), Query Frame = 0
Query:   53 DPSLTRAYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLPL---LSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQVSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWD----GRRERMDGILVWEAVEGEEG---ERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            DP      +T +  +SP+V+    H++   S  P  PFSF AGQW+D+++P +   GGFS+ SSP  L     + LA+K S +  S+   W HT    + G  V +RVGG F     ++  M  TR++ +AGGVGINPL S++  +   +                          +  V+L++SA    ELIF E   E+  + A W   ++ +T    G  +      GR +  D + V +  +  +G    +   +  VY+CGP +MT+ ++  L   ++ G+E         +  EKWW
Sbjct:   54 DPDTHDVAVTKMSMISPTVK----HLVLSTSERP-VPFSFKAGQWIDMHIPGVDTVGGFSITSSPMHLRRTGDIHLAVKNSESPPSM---WVHTK--CQVGISVSIRVGGDFFLPPLDQFTMP-TRILFIAGGVGINPLSSMIMEIRDNITRSTIGAWK-----------------QLNVTLLFSAKTHEELIFRE---EFDAIKAPWFKPIYFLTSSDKGYSSSSSVKYGRIQIQDVLAVLQQDDRSKGPNTNKALNQCHVYLCGPPDMTNTLQHCL---KDMGVE--------NIFFEKWW 314          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: XP_005097509.1 (PREDICTED: oxidoreductase NAD-binding domain-containing protein 1-like [Aplysia californica])

HSP 1 Score: 117.5 bits (293), Expect = 8.400e-23
Identity = 92/298 (30.87%), Postives = 141/298 (47.32%), Query Frame = 0
Query:   56 LTRAYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESL---PLLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKD-----KGRFQVSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            ++ A I  +  +SP+V+QL +H++        + F F AGQWVD+++P +   GG+SM S+P +L     L LA+K SP      A W HT    KEG  V +R GG F +   +    +   L+LLAGGVG+NPL SIL H +                        E+D     K + +VS +YSA    ELIF+E++KE    + + +++    TR+     A +       G +  + +E    +  + KA VYICGP +    ME   +  +  G        K+ +  E WW
Sbjct:   60 ISPAQIKEVKNISPTVKQLRVHVM-------DSCFFFKAGQWVDMFIPGVDVVGGYSMCSAPHTLVSTGQLVLAVKSSPHP---PAHWVHTK--CKEGSEVKMRAGGDFFYDPPKHACTED--LLLLAGGVGVNPLFSILQHFI------------------HLHPSQERDRNAGAKSQPKVSFLYSAQNMEELIFKEELKEIAGKNPN-VNLKMHCTRQ-----AVESADFISGGRIGQKDIELTSSQLDKSKAQVYICGPGSFIKSME---LYCQNSG------FNKSSIFYETWW 310          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: PKB77510.1 (hypothetical protein BZY70_02400 [SAR202 cluster bacterium MP-SInd-SRR3963457-G2])

HSP 1 Score: 116.3 bits (290), Expect = 1.900e-22
Identity = 96/290 (33.10%), Postives = 137/290 (47.24%), Query Frame = 0
Query:   61 ITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPN--LRHCGGFSMISSPESLPLLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVG-GGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQ--VSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            IT+I  +SP+V+     +             FL GQWVDLYV        GG+S+IS+P    ++ LAIK  P  R      A+  + AK GD V LR G GGFHF   E  W     LVL+AGG+GI PL+SIL +V                           D+ R +  V LIYSA+  +EL+F E+I+     +   +   F V+R  G  GAWDGR  R+D  L+ E    ++       +L Y+CGP +  D++  ++      G+E       + +  E+WW
Sbjct:    7 ITSIQQISPTVKVFGFDL-------GGVELDFLPGQWVDLYVDTGLSVQVGGYSIISTPLQQGIIELAIKRLPQGRVA----AYLHDHAKVGDEVELRGGSGGFHF---EPEWQ--GPLVLIAGGIGITPLISILRYV---------------------------DQSRLENPVELIYSASQPSELLFREEIQAIADRNTG-IRCAFTVSRPQG--GAWDGRVGRIDLELLREHAPTQD-------SLYYVCGPPSFQDDLSVLV---SNLGVEA------SMIRAERWW 234          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: EXX74992.1 (hypothetical protein RirG_045950 [Rhizophagus irregularis DAOM 197198w] >GBC31312.1 nitric oxide dioxygenase [Rhizophagus irregularis DAOM 181602] >POG58789.1 hypothetical protein GLOIN_2v1727598 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 115.9 bits (289), Expect = 2.400e-22
Identity = 81/265 (30.57%), Postives = 135/265 (50.94%), Query Frame = 0
Query:   85 SPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLP---LLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQ-VSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            S  + FSFL GQW+D+++PN+   GGFS+ S+P+S        LAIK    S    A+W H  E A  GD + +RVGG F +   +E   +   ++ +AGGVGINPL+S+L  +                        ++K K   + + L YS    +EL+F ++I+   K     L   + +TR+     +    ++R+D  ++ + +E +EG+   EK   +ICGPS+M D++ + L    E G++      + +++ EKWW
Sbjct:   60 SSSSEFSFLPGQWLDVFIPNVSIVGGFSLTSTPQSYKETNTFELAIK---YSNHPPAKWFH--EQANIGDEISVRVGGEFVWDSLKEKQEQTEHVIFIAGGVGINPLISMLESI-------------------CQDKLLDKKKSFIEKIRLFYSVRTFSELLFYKRIEGLNKQFPEMLECSYFLTRDDPLHKSEFYYKQRIDKKIINDVIE-KEGDY-LEKLKCFICGPSSMEDDIIKFL---NESGVD------EERILFEKWW 289          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: PKK59257.1 (ferredoxin reductase-like protein [Rhizophagus irregularis])

HSP 1 Score: 115.9 bits (289), Expect = 2.400e-22
Identity = 81/265 (30.57%), Postives = 135/265 (50.94%), Query Frame = 0
Query:   85 SPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLP---LLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQ-VSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            S  + FSFL GQW+D+++PN+   GGFS+ S+P+S        LAIK    S    A+W H  E A  GD + +RVGG F +   +E   +   ++ +AGGVGINPL+S+L  +                        ++K K   + + L YS    +EL+F ++I+   K     L   + +TR+     +    ++R+D  ++ + +E +EG+   EK   +ICGPS+M D++ + L    E G++      + +++ EKWW
Sbjct:   87 SSSSEFSFLPGQWLDVFIPNVSIVGGFSLTSTPQSYKETNTFELAIK---YSNHPPAKWFH--EQANIGDEISVRVGGEFVWDSLKEKQEQTEHVIFIAGGVGINPLISMLESI-------------------CQDKLLDKKKSFIEKIRLFYSVRTFSELLFYKRIEGLNKQFPEMLECSYFLTRDDPLHKSEFYYKQRIDKKIINDVIE-KEGDY-LEKLKCFICGPSSMEDDIIKFL---NESGVD------EERILFEKWW 316          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: PKY45887.1 (ferredoxin reductase-like protein [Rhizophagus irregularis])

HSP 1 Score: 115.9 bits (289), Expect = 2.400e-22
Identity = 82/265 (30.94%), Postives = 131/265 (49.43%), Query Frame = 0
Query:   85 SPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLP---LLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQ-VSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            S  + FSFL GQW+D+++PN+   GGFS+ S+P+S        LAIK    S    A+W H  E A  GD V +RVGG F +   +E   +   ++ +AGGVGINPL+S+L  +                        ++K K   + + L YS    +EL+F ++I+   K     L   + +TR+     +    ++R+D  ++ + +E E      EK   +ICGPS M D++ + L    E G++      K +++ EKWW
Sbjct:   60 SSSSEFSFLPGQWLDVFIPNVSIVGGFSLTSTPQSYKETNTFELAIK---YSNHPPAKWFH--EQANIGDEVSVRVGGEFVWDSLKEKQEQTEHVIFIAGGVGINPLISMLESI-------------------CQDKLLDKKKSFIEKIRLFYSVRTFSELLFYKRIEGLNKQFPEMLECSYFLTRDDPLRKSEFYYKQRIDKKIINDVIEKERDY--LEKLKCFICGPSAMEDDIIKFL---NESGVD------KERILFEKWW 289          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: PIK56696.1 (putative oxidoreductase NAD-binding domain-containing protein 1 isoform X2 [Apostichopus japonicus])

HSP 1 Score: 115.2 bits (287), Expect = 4.200e-22
Identity = 91/298 (30.54%), Postives = 131/298 (43.96%), Query Frame = 0
Query:   57 TRAYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLP---LLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGG---FHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQVSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGI---LVWEAVEGEEGERGREKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            + A + +I   S SV+ L L +           F+F AGQWVD  VP +   GGFSM +SP+ L     L LA+K    S    A W HT      G  V LRVGG    +  Q     W     L+L+AGG+GINP+ S+L  V G+  +                             L+YSA++  ELIF E I E  K H + +S  + +TR  G +G+    ++  + I   +  + +            L  +CGP  M D  E IL   +++G      + K  ++TEKWW
Sbjct:   17 SEAEVISISDASESVKLLTLKVTAN-------DFTFKAGQWVDFVVPGVERVGGFSMYTSPDQLTENGTLGLAVK---KSEHQPAMWVHTK--CSVGSKVSLRVGGDQLLYDPQPDSPSW----NLLLIAGGIGINPIFSVLNRVCGFHRQCKNVNGVYKPGV---------------TELLYSASVPNELIFRESISEMVKQHPNEISSKYFITR--GKDGSIQELKKTENVIERRISEDDLRSSITRLNNNSLLCMVCGPPPMIDSFEEIL---QKQG------IPKDNILTEKWW 272          
BLAST of NO23G01850 vs. NCBI_GenBank
Match: KOO53180.1 (oxidoreductase NAD-binding domain-containing protein 1 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 114.8 bits (286), Expect = 5.400e-22
Identity = 93/326 (28.53%), Postives = 128/326 (39.26%), Query Frame = 0
Query:   59 AYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDLYVPNLRHCGGFSMISSPESLPLLSLAIKGSPASRSIHARWAHTSEGAKEGDVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVEEXXXXXXXXXXXXXXXXXXIEKDKGRFQVSLIYSAAMRAELIFEEQIKEWTKMHASWLSVLFIVTRELGGEGAWDGRRERMDGI-----------------LVWEAVEGEEGERGR----------------------EKALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW 346
            A IT +  LSP+   L L +    +  P + F+F+ GQWVD Y+P +   GG+S+ S P  LP+L LA+K      S H   A  +  AK GD VG+RVGG F  +    +       + +AGGVGINPL  +L  +                         E  +G  +  L+Y+A  R EL+F E+++   +            TRE    GA DG      G+                 L W   E      GR                       +   Y+CGP  MTDE    L           RR+  A+V  EKWW
Sbjct:   38 ATITRLTQLSPTTTALQLMLDNDGTGEPASRFTFVPGQWVDFYIPQIDVVGGYSITSLPSELPILELAVKA-----SAHPPAAWCTGRAKVGDKVGVRVGGSFVLRPAPSN-------LFVAGGVGINPLFGMLRQL------------------------FELPEGTSKAVLLYTARTRDELVFAEELQALAQRQPERTRFWLRATRE--PAGALDGGATAAPGVAGLGAGGRLCELDLEEALRWLGCEPSAVREGRGVPWRAESRAREPGPGGAGCATGRLGAYVCGPPRMTDETVAAL-----------RRMGVAEVYLEKWW 314          
The following BLAST results are available for this feature:
BLAST of NO23G01850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27838.16.300e-10354.50oxidoreductase nad-binding domain-containing prote... [more]
XP_013413750.14.600e-2933.91oxidoreductase NAD-binding domain-containing prote... [more]
XP_021948245.16.400e-2329.04oxidoreductase NAD-binding domain-containing prote... [more]
XP_005097509.18.400e-2330.87PREDICTED: oxidoreductase NAD-binding domain-conta... [more]
PKB77510.11.900e-2233.10hypothetical protein BZY70_02400 [SAR202 cluster b... [more]
EXX74992.12.400e-2230.57hypothetical protein RirG_045950 [Rhizophagus irre... [more]
PKK59257.12.400e-2230.57ferredoxin reductase-like protein [Rhizophagus irr... [more]
PKY45887.12.400e-2230.94ferredoxin reductase-like protein [Rhizophagus irr... [more]
PIK56696.14.200e-2230.54putative oxidoreductase NAD-binding domain-contain... [more]
KOO53180.15.400e-2228.53oxidoreductase NAD-binding domain-containing prote... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL035nonsL035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR062ncniR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR126ngnoR126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007507NSK007507Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01850.1NO23G01850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608523gene_10007Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100074g4gene2720Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01850.1NO23G01850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01850 ID=NO23G01850|Name=NO23G01850|organism=Nannochloropsis oceanica|type=gene|length=2421bp
GCGGATGTGGAGTTAGGGGCCGGCGCGTTAGATGGATGTGATGACGATGA
TGAATTTGCCGTCTACCTTGTGTACGGCCAGAGCGGGAACTACAGCGTCC
TGGTAGGAGCCCTTTATTGCCTGCGTTTAAAATGGTACCAATTTGAGCGT
GCGAGCAACGTGTATGGTAAGGTGAGAGTGGGATCCAGTGTAGTGTGAGG
TTGGTGTGGCGCGCACACTACCTCGCCGACGACGATGGCTTGGTGAGTGG
AGAGCTCTGAAAGCACACACGTGTCCTCCGCTACATGCTTCCACGCTAAC
TCATCAAGACTCTATACGCAAGCACAGCATGCCCATGCACAAGTGCGTGC
ATAAGACGCTCAAAATGGCCTGCTTTTCCCTCCTCTGTGGGTGACATTTT
AGGTTCTATACTCGCCTCCTCGTCGACCTCCTGCCTCCACATCCCACAGC
AAAACGCTCATTAAATGAGACAGGCACCCTTTTGGCGTCCCAGTGCTTAG
CAAGTGTCTCCGTTGCTCCCTTGAGCCCTGGGCATCTCTGCCTATCCTTG
CCGGCACTCTTTTCATAGAACCTTTTTCATTCATATCTACACACTCCCTT
TCTCGTATGCCCAATACGACGACCATAATATGCAGGAACGCATGCAAAGA
CGGGCCATTCTCTCCCCATTGCTGTCGTCCGCCACCCCCATAGCAGCCAG
CCGCCACCTCCGCCACTGCCCGTGCTGCCATCACATGTCATCCTCTTCCA
GCCCTCCGGCATCCCTCCCTTCTCCCCTCCCGGACGACCCTTCCCTCACC
CGCGCCTACATCACGGCTATTCACACTCTCAGTCCGAGTGTGCGCCAACT
TGATCTCCACATTCTGTGTGGCAAGAGCAATTCGCCTCGGGCACCCTTCT
CCTTCCTCGCCGGACAATGGGTTGACTTATACGTTCCAAATCTCCGACAC
TGTGGAGGATTCTCCATGATCTCCTCCCCCGAATCACTCCCTCTCCTCTC
ACTTGCCATCAAAGGCTCCCCTGCTTCCCGCTCTATCCACGCACGCTGGG
CGCACACATCAGAAGGCGCAAAGGAAGGCGATGTGGTCGGCCTAAGGGTA
GGAGGAGGATTTCACTTTCAAATGACGGAAGAGCACTGGATGAAGGGGAC
AAGGCTGGTGCTGCTTGCGGGAGGGGTGGGCATTAATCCACTCATGAGCA
TTTTGGCGCACGTGGTTGGGTGGGTGGAAGAGAGGGAAAAGCAGCAGGAG
GGTGGCAAGGAGAAAGAGGAAGAGGAGGAGGAAGGGATAGAGAAGGACAA
GGGTAGGTTTCAGGTGTCTCTCATTTACAGTGCAGCTATGCGAGCAGAGC
TAATTTTTGAGGAACAGATAAAGGAGTGGACAAAGATGCATGCCTCGTGG
CTGTCCGTGTTGTTTATCGTGACGAGGGAACTTGGAGGGGAGGGGGCGTG
GGACGGACGGAGGGAGAGAATGGATGGGATATTAGTGTGGGAGGCCGTTG
AAGGAGAAGAAGGGGAGAGAGGGAGGGAGAAGGCATTGGTGTACATATGT
GGGCCGTCGAACATGACAGATGAAATGGAGAGGATCCTGATTGGTGGGGA
AGAGGAAGGAATGGAGGGAGGGAGGCGTTTGAGGAAGGCGCAGGTGGTAA
CTGAGAAGTGGTGGTAAGGGTAGAAAAGAGAAGCGAGTGGTGTGAAGTAG
TTCCCCTAAAATCACAATGAAGTCAACGAAAGGTCAGACAAGGAGTTACT
TTCGGCTGCCTCACCACCACCGTTAATTCAATTTTGGTCCTATCGGAGAT
TATCAGATCTGAACGCATCGGCAGGACAAGAGGTGGCTCTCGGGTGGGAT
TGCAAAAAGATGCCGGCCTGGGTGGACGAGGACCGAGGCTCAAGGTCCAG
ACAGGAGAAGGATGGACATCAGTCAGCGAAATGGTTAGATAGACCCAATA
TAAGACGATTAAAGGATTCTTCGCCGCGCAGAGGCATCTCCTGCGCCAAG
GGCCATCCGCATCTCGAATTCATCAGGGTTCTGCGAGCTTGTGGCGTGCG
ACAAAGCAAGCGTCACATTTTACCTGGGTTGACCACGGCACACGGATGAA
AGGCTTGGGTCACGGGAAAAAAGATCTGTAATCACCGGGTCTGTAAACGA
AGGACTGATATCCAACTGATCCCCGCACAGCTGTAAGACCTACATATAAT
CCAGGAGGCTGAAGGATCCTATACGAAATTTTTTTCGTCCAAATAATCAA
AAGATTCAATACCTGCAAAACTGGTCCCGAGGCAAAAGAAAGGTCACCAC
CACCACCACCAGCAGAGCATCACCACCACCACCACCACCACCGTTGCCAT
CACTACAGTCTTCTTTGCGTCCCTTGGGCGTACCTTAGCTGGGTTTCAAC
GAAAAGGAAACACAACTTCAG
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protein sequence of NO23G01850.1

>NO23G01850.1-protein ID=NO23G01850.1-protein|Name=NO23G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp
MQERMQRRAILSPLLSSATPIAASRHLRHCPCCHHMSSSSSPPASLPSPL
PDDPSLTRAYITAIHTLSPSVRQLDLHILCGKSNSPRAPFSFLAGQWVDL
YVPNLRHCGGFSMISSPESLPLLSLAIKGSPASRSIHARWAHTSEGAKEG
DVVGLRVGGGFHFQMTEEHWMKGTRLVLLAGGVGINPLMSILAHVVGWVE
EREKQQEGGKEKEEEEEEGIEKDKGRFQVSLIYSAAMRAELIFEEQIKEW
TKMHASWLSVLFIVTRELGGEGAWDGRRERMDGILVWEAVEGEEGERGRE
KALVYICGPSNMTDEMERILIGGEEEGMEGGRRLRKAQVVTEKWW*
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Synonyms
Publications