NO23G01440, NO23G01440 (gene) Nannochloropsis oceanica

Overview
NameNO23G01440
Unique NameNO23G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2199
Alignment locationchr23:531330..533528 +

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Properties
Property NameValue
DescriptionAnkyrin repeat and kh domain-containing protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:531330..533528 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of NO23G01440 vs. NCBI_GenBank
Match: XP_005852525.1 (ankyrin repeat and kh domain-containing protein 1 [Nannochloropsis gaditana CCMP526] >EKU23307.1 ankyrin repeat and kh domain-containing protein 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 155.2 bits (391), Expect = 5.400e-34
Identity = 92/224 (41.07%), Postives = 119/224 (53.12%), Query Frame = 0
Query:    2 WHAIHTCVLKKDLPALRWLLHCASTFPSSSPVYTYFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFIDKGSAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIALLRSLPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGAD 226
            W  IH CV ++DLPAL  +L      P S+   +                                                 SFID+ SA+NCTALM+A  +GL A+  +LV++GADV+LRDDNGLSALYL CM GHASI SFL+ +GA P  T  RD T+ LH A LH    C  ALL  LPP LR AL+  ++    TAL+YAV+  +  ++K+ L+AGAD
Sbjct:    3 WCPIHRCVFRRDLPALCQILSETPRVPPSAATSS------------------------------LSFPSSYVLPSPTTLRLPTSFIDEPSAFNCTALMLAVGEGLGAMAMILVAHGADVNLRDDNGLSALYLGCMRGHASIVSFLLYKGADPTVTSQRDNTSCLHIAVLHHYAHCVHALLHGLPPDLRQALLQHRDAFDHTALDYAVEGRDTRIVKILLSAGAD 196          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: XP_005855373.1 (ankyrin repeat and kh domain-containing protein 1 [Nannochloropsis gaditana CCMP526] >EKU20991.1 ankyrin repeat and kh domain-containing protein 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 142.1 bits (357), Expect = 4.700e-30
Identity = 86/207 (41.55%), Postives = 107/207 (51.69%), Query Frame = 0
Query:    2 WHAIHTCVLKKDLPALRWLLHCASTFPSSSPVYTYFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFIDKGSAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIALLRSLPPALRLALVNQKNDCGETALNYAV 209
            W  IH CV ++DLPAL  +L      P S+   +                                                 SFID+ SA+NCTALM+A  +GL A+  +LV++GADV+LRDDNGLSALYL CM GHASI SFL+ +GA P  T  RD T+ LH A LH    C  ALL  LPP LR AL+  ++    TAL+YAV
Sbjct:    3 WCPIHRCVFRRDLPALCQILSETPRVPPSAATSS------------------------------LSFPSSYVLPSPTTLRLPTSFIDEPSAFNCTALMLAVGEGLGAMAMILVAHGADVNLRDDNGLSALYLGCMRGHASIVSFLLYKGADPTVTSQRDNTSCLHIAVLHHYAHCVHALLHGLPPDLRQALLQHRDAFDHTALDYAV 179          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: XP_013757260.1 (ankyrin domain-containing protein [Thecamonas trahens ATCC 50062] >KNC50101.1 ankyrin domain-containing protein [Thecamonas trahens ATCC 50062])

HSP 1 Score: 72.0 bits (175), Expect = 6.000e-9
Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 0
Query:  100 IAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIALLRSLPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGADGRVRNSGGYHP 237
            +AA  GL   V VL+ +GADV      G + L+ A +GG   +A +L+  GA P A     G TPL+ A+LH R    + +LR L   +  A V      G TAL+ A  +G++ ++   L AGAD   R+  G+ P
Sbjct:    1 MAAHQGLTEAVAVLLQHGADVAGEGQAG-APLHYAAVGGCVPVARYLLKAGADPMALARSGGYTPLYLAALHAR----LDMLRMLLGLVPAAHVGATMTNGATALHGAAMSGSLDVVAALLDAGADPNARSDRGHTP 132          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: PVD18899.1 (hypothetical protein C0Q70_21457 [Pomacea canaliculata])

HSP 1 Score: 72.0 bits (175), Expect = 6.000e-9
Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   87 IDKGSAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRG-ASPFATCLRDGTTPLHRASLHRRPACAIALLRSLPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLY 220
            I+  +A   TAL ++A  GLD +VD+L+  GAD+ ++D NG  AL+ AC+G  AS    LI  G   P   C ++G   LH A++     C  ALL         A    +ND  ET ++ A   G + +IK++
Sbjct:  186 INAKNAAGSTALHLSAYHGLDDVVDMLLRKGADITIKDINGHVALHRACVGHRASTVRLLIKSGHCDPHMRCPQNGWVALHEAAMRGNVECVKALLE------LNATPYPRNDDRETPVDVAKKYGRLDVIKVF 313          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: CDN43319.1 (Zn-dependent protease with chaperone function-like protein [Paenibacillus sp. P22])

HSP 1 Score: 70.9 bits (172), Expect = 1.300e-8
Identity = 53/142 (37.32%), Postives = 71/142 (50.00%), Query Frame = 0
Query:   87 IDKGSAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIALLRS-LPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGADGR 228
            ID  +    T L  AAS+G +  V  L+  GAD ++R  +G S L   CM GHA I   L+  GA P  TC  DG TPL  AS + R  C   LL +   P +R       +  G TAL++A D G+  + +L  A  A G+
Sbjct:  703 IDGANRDGNTPLFWAASEGNEEAVCWLLEKGADPNVRYVSGRSVLSPVCMYGHARILKLLLDAGAEPVHTCHSDGETPLMIASYNGRYDCVELLLAAGADPDVR-------DKHGNTALSFAKDHGHDDVAELLQAHAASGQ 837          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: WP_048746117.1 (hypothetical protein [Paenibacillus sp. P22])

HSP 1 Score: 70.9 bits (172), Expect = 1.300e-8
Identity = 53/142 (37.32%), Postives = 71/142 (50.00%), Query Frame = 0
Query:   87 IDKGSAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIALLRS-LPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGADGR 228
            ID  +    T L  AAS+G +  V  L+  GAD ++R  +G S L   CM GHA I   L+  GA P  TC  DG TPL  AS + R  C   LL +   P +R       +  G TAL++A D G+  + +L  A  A G+
Sbjct:  674 IDGANRDGNTPLFWAASEGNEEAVCWLLEKGADPNVRYVSGRSVLSPVCMYGHARILKLLLDAGAEPVHTCHSDGETPLMIASYNGRYDCVELLLAAGADPDVR-------DKHGNTALSFAKDHGHDDVAELLQAHAASGQ 808          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: XP_011665987.1 (PREDICTED: ankyrin repeat and KH domain-containing protein mask-like [Strongylocentrotus purpuratus])

HSP 1 Score: 70.1 bits (170), Expect = 2.300e-8
Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   87 IDKGSAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLIS-RGASPFATCLRD-GTTPLHRASLHRRPACAIALL----RSLPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGADGRVRNSGG 234
            +D  S  N T L++AA  G  + V+ L+SYGAD   RD++G S +++A +GG      F++   G S   +   + G  PLH A+      C   LL    R         LV++++  G+T L+ AV+ G  P+I+  + AGAD  ++N+ G
Sbjct:  234 VDVKSTNNSTPLLLAAEYGHQSCVEELISYGADPTKRDNDGDSLVHVASLGGGLETLKFVLDLEGMSKLISSKNNVGQIPLHSAAKVGNIDCVELLLAQDTRQEDGEDSCFLVDEQDSQGKTPLHLAVEGGFSPVIEALIEAGADLNIQNNDG 386          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: GAX99693.1 (Hypothetical protein PINS_007545 [Pythium insidiosum])

HSP 1 Score: 68.2 bits (165), Expect = 8.700e-8
Identity = 49/154 (31.82%), Postives = 71/154 (46.10%), Query Frame = 0
Query:   96 TALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIALLRSLPPALR--LALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGADGRVR------NSGGYHPFGRYW 242
            TAL  A   G  AIVD L+  GAD +++D +G   L++A   G   IA  L+ +           G TPLH A  +     A+ L++ L  + +    +V+ ++  G TAL+YA   GN+  +   L AGA   V         G  H  G YW
Sbjct:  335 TALHEATEQGHTAIVDQLLKLGADAYIQDQHGELPLHIAARKGFEKIAICLVFKFPGTIRLQNSTGKTPLHYAVEYHHSTIALKLVKVLVDSSQDHAKIVDFQDVHGFTALHYACIDGNVQFVSALLEAGAHSEVSCHTYKLEKGADHMIGSYW 488          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: ACO15472.1 (26S proteasome non-ATPase regulatory subunit 10 [Caligus clemensi])

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-7
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 0
Query:   96 TALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRD--GTTPLHRASLHRRPACAIALLRSLPPALRLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGADGRVRN 231
            T L+IA+S G + +V  L+S+GA V+ R D G SA + AC     SIA+ L    A      ++D  G +PLHRA         I +    P   +L   N ++  G T L+ A + GN   ++++L AG+D  ++N
Sbjct:   77 TPLIIASSAGHEKVVRTLLSFGASVNARTDQGRSAFFYACSRNRTSIANMLADANAD---MNIQDNLGASPLHRAVGVGHVELLINIFEKFP---KLVDPNLRDLQGNTPLHIACEDGNFACLEVFLKAGSDPSIQN 207          
BLAST of NO23G01440 vs. NCBI_GenBank
Match: KID70560.1 (Ankyrin repeat-containing domain protein, partial [Metarhizium anisopliae ARSEF 549])

HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7
Identity = 50/172 (29.07%), Postives = 76/172 (44.19%), Query Frame = 0
Query:   87 IDKG-----SAYNCTALMIAASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRGASPFATCLRDGTTPLHRASLHRRPACAIAL----------LRSLPPAL------------------RLALVNQKNDCGETALNYAVDTGNIPLIKLYLAAGAD 226
            +DKG       Y+ T L  A + G   I ++L+  GA++H+R   G + L++A   GH  +   L+  GA P  T    G+TPL  A +H + A A  L          +R+L  AL                  R  L+N ++  G T L  A   GN  +++ +LA  AD
Sbjct:  168 LDKGVDPSAEIYDRTPLEAAVNIGSSDITNILLENGANIHVRPHPGDTLLHIAARSGHVDVLKILLKHGADPSVTLRGCGSTPLKDAIVHEKRAAACLLMQKTTNHGASMRTLFSALRHGATITLAVLHLKAGVARAGLINTRDYAGRTVLFIAARQGNPKMVQQFLAHEAD 339          
The following BLAST results are available for this feature:
BLAST of NO23G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 18
Match NameE-valueIdentityDescription
XP_005852525.15.400e-3441.07ankyrin repeat and kh domain-containing protein 1 ... [more]
XP_005855373.14.700e-3041.55ankyrin repeat and kh domain-containing protein 1 ... [more]
XP_013757260.16.000e-935.77ankyrin domain-containing protein [Thecamonas trah... [more]
PVD18899.16.000e-935.07hypothetical protein C0Q70_21457 [Pomacea canalicu... [more]
CDN43319.11.300e-837.32Zn-dependent protease with chaperone function-like... [more]
WP_048746117.11.300e-837.32hypothetical protein [Paenibacillus sp. P22][more]
XP_011665987.12.300e-832.68PREDICTED: ankyrin repeat and KH domain-containing... [more]
GAX99693.18.700e-831.82Hypothetical protein PINS_007545 [Pythium insidios... [more]
ACO15472.11.100e-733.5826S proteasome non-ATPase regulatory subunit 10 [C... [more]
KID70560.12.500e-729.07Ankyrin repeat-containing domain protein, partial ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR062ncniR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01440.1NO23G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|308660gene_10048Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01440.1NO23G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01440 ID=NO23G01440|Name=NO23G01440|organism=Nannochloropsis oceanica|type=gene|length=2199bp
ATGTGGCATGCTATCCACACCTGTGTCCTCAAAAAGGACTTGCCGGCCCT
TCGTTGGCTTCTTCATTGTGCCTCTACCTTCCCTTCATCCTCCCCCGTCT
ACACCTACTTCTCTTCGTCCTCCAATCCCTCTTTATCCCCCTCTTCTAGC
ATCCTCTCCTCCTCCTCCGCCGCCTTCGTCCCACCCCATCTTTCCTCCTG
CCCCTCTTCTCCTCCCTCCATGACTTTTCGCCCTTCTTCTCGCCCTCCTT
CCTCCTTCATCGACAAAGGGAGTGCCTACAACTGCACAGgtaggaaaatt
atccgcatttttaaagggagacaatccgtaccttccccttctcttcctcc
tcccttccctgccttcttccatccctccctccttgcatacctgtttaaac
atgctactgtcagggtggtgctaacatccctctctcgcctccctcccttc
gtaccctacacacagCTCTAATGATCGCTGCCTCAGACGGGTTGGACGCA
ATTGTTGATGTCCTTGTCTCATACGGAGCCGATGTACACCTGAGAGACGA
CAACGGCCTCAGCGCTCTCTACCTGGCTTGCATGGGTGgtaagtcacccg
cctttccacccttcctcctctcttctctcctttcctctctcctttcttcc
ctctcttgacatacaactgagagacgaccagggccctacttctcttcttc
cccccttcccttgtttgagaggaaagctcacacccttcccttcctccttc
ccttcctccttccctcccttcctccccttcgtccagGCCACGCCTCTATC
GCCTCCTTCCTCATCAGCCGGGGAGCCTCTCCTTTTGCCACTTGCCTTCG
CGATGGAACCACCCCTTTACACCGCGCTTCCCTCCACCGCCGCCCTGCCT
GTGCCATTGCCCTCCTTCGCTCCCTTCCTCCCGCACTCCGCCTCGCCCTT
GTCAATCAAAAGAATGATTGTGGAGAGACAGCCTTGAATTACGCAGTGGg
taaggttcttccccttcctccccccccctcccttcctccctccctcatca
ttcccaaagagtcctttcatccccctagctcttttcgtccctcgccttcc
ttccatactccttcccacattccttccctcccttcccatcatgttcgccg
agtgtgtcatattgactgacacccgcatctcccatgtgcatctcccaaat
taatagttcttcgggcttccgcccctccctccctccctccctccctccct
ccctccccccctccctctttccttcccttcagACACGGGAAATATCCCTC
TGATCAAACTTTACTTGGCTGCTGGTGCCGATGGCCGCGTCAGGAATAGC
GGTGGGTACCATCCCTTCGGGCGGTACTGGACGATAGAGGAAGAGAGGAA
GGGAGGGGTGATTGCGGTGCTGAGGGAGATCGAGAGGGTGGGGTGTCTTA
TTAAGGCCCGAACGCTAGTGGATGATGTGTGGGAGCTCGTAGAGGGGGAG
GGAGGGAAGGAGGAAGAGAAAGAGAAGAGAAAAAGAGGGGTGGTGAAGAA
AGAGGGAGAGGAGAGGGAGGGAAGAAAAGTGCCGTTGTACTTGCAAAAGC
GGATGAGCGGTCTATGCCGGGTAACGAGGGAGAGGGAGAGGACATGGATG
AGGAGGAGGAAAGGGGGTGGGAAGAGGAGGAAGGAGGTGTTGCTGAAAGG
CTTGCCGCGGGTGGTGATTCGGGGAGTAAGGCGGAGAGGGAAGGAGGGCG
AGAGGAGGAGAATGGTTGGGGGGGGAAGGGAGCAAGAGCAGGAGGAGGAG
ATAGAGCGTGGAGAGCAAGGGAGAATGGCAAAAAGGTTGAAAAGGGGTGC
GGCAATGCTTGACGAATGTAAATTGGAAAATATGGTGGAGGAGAATGAGG
AAAAGGATGCGGAGGAAGAGATAGAGGGAAGGAAGGAAGCGGCAAAGAAA
GAGATCGAGACGGCAAAAAATCTCGTCGGGGAGGGTGAGAAATGGAGGAA
GGTGGAAGATGAGCAGGAAGAGCAGGAGGAGACTACGGTGGAAGTGTTTC
GGGCGGTGGTAGAGGGAAATGTACTTACGAGAGTGGTGTTCGAGGAACTC
GTTGCTTACATGCGTTGCCCTTGGGATCCGGTCGTGGCTGTGTGGGATGG
GGGGGAGGATGGCAGGGAGGTGGCGAAGGTGGGAGGGGTGCAACAATGA
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protein sequence of NO23G01440.1

>NO23G01440.1-protein ID=NO23G01440.1-protein|Name=NO23G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=514bp
MWHAIHTCVLKKDLPALRWLLHCASTFPSSSPVYTYFSSSSNPSLSPSSS
ILSSSSAAFVPPHLSSCPSSPPSMTFRPSSRPPSSFIDKGSAYNCTALMI
AASDGLDAIVDVLVSYGADVHLRDDNGLSALYLACMGGHASIASFLISRG
ASPFATCLRDGTTPLHRASLHRRPACAIALLRSLPPALRLALVNQKNDCG
ETALNYAVDTGNIPLIKLYLAAGADGRVRNSGGYHPFGRYWTIEEERKGG
VIAVLREIERVGCLIKARTLVDDVWELVEGEGGKEEEKEKRKRGVVKKEG
EEREGRKVPLYLQKRMSGLCRVTRERERTWMRRRKGGGKRRKEVLLKGLP
RVVIRGVRRRGKEGERRRMVGGGREQEQEEEIERGEQGRMAKRLKRGAAM
LDECKLENMVEENEEKDAEEEIEGRKEAAKKEIETAKNLVGEGEKWRKVE
DEQEEQEETTVEVFRAVVEGNVLTRVVFEELVAYMRCPWDPVVAVWDGGE
DGREVAKVGGVQQ*
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Synonyms
Publications