NO23G00510, NO23G00510 (gene) Nannochloropsis oceanica

Overview
NameNO23G00510
Unique NameNO23G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2068
Alignment locationchr23:217098..219165 +

Link to JBrowse

Properties
Property NameValue
DescriptionNucleoporin SEH1-B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:217098..219165 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR037363Sec13/Seh1_fam
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of NO23G00510 vs. NCBI_GenBank
Match: XP_002297003.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED86731.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 203.4 bits (516), Expect = 1.200e-48
Identity = 119/333 (35.74%), Postives = 167/333 (50.15%), Query Frame = 0
Query:    4 GHDYYILDAEYDFYGRRFATCSSDHSIRIWD---QQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPL---QDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCEL--SRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            GH  Y+LD  +D+YGRRFAT S D ++R+WD       ++W       +A R A+ R+SWAH                                            TL ++ R V+TV FAP  LGL++A+G+ADG+VR+YEA++  NL HW L       +G         V+SLSW   RF+PP +V G S G + ++   ++GQ      R W     L           GV DVAWAP +GRSYHLIA+ G+DN+L++H ++R                      E T+ +D   + WR++WNV GT+LASSG+ GVV+LW+ D  GRW
Sbjct:    6 GHLDYVLDMAFDYYGRRFATASGDRTVRVWDLNGDGTTNEW-------QAHRGAVHRISWAH--------------------PEFGQLLATAGAGEYATSRWVNKATLSDARRAVTTVEFAPRHLGLRLASGSADGVVRIYEALDTMNLNHWKLDGRNSGLDGNVSSNENMGVSSLSWCTGRFEPPTLVTGFSSGRVSIY-RYDDGQ------RSWLEYIRLPSHATASGVPRGVLDVAWAPNVGRSYHLIASCGKDNQLKVHRVKRGRGNKGDAEGASSSSL----VYEGTEVLD-RTQAWRIQWNVTGTVLASSGDGGVVKLWKSDFQGRW 299          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: XP_024574829.1 (Nuclear pore complex component (sc Seh1) [Plasmopara halstedii] >CEG38460.1 Nuclear pore complex component (sc Seh1) [Plasmopara halstedii])

HSP 1 Score: 199.9 bits (507), Expect = 1.300e-47
Identity = 141/339 (41.59%), Postives = 185/339 (54.57%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  ++ D  +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAHXXXXXXXXXXXXXXXXXXXXXXX                     T             L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+    KVW     G +  +  RRW+++ EL+       + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEHE--WNAHQASVWKVEWAHXXXXXXXXXXXXXXXXXXXXXXXLYLNASANSSDSTAANGVASVTSAGNKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGTTCVSWNKSRFDVPMIVVGGNSDVAKVW-----GYNNSY--RRWQIVVELA----GHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLTIQENDHLHADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 321          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: ETI31760.1 (hypothetical protein F443_21320 [Phytophthora parasitica P1569])

HSP 1 Score: 199.5 bits (506), Expect = 1.700e-47
Identity = 142/339 (41.89%), Postives = 184/339 (54.28%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  ++ D  +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAHXXXXXXXXXXXXXXXXXXXXXXX                                   L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+G   KVW     G +  +  RRW+V+ EL        + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEYE--WNAHQASVWKVEWAHXXXXXXXXXXXXXXXXXXXXXXXLYLNASASSSDTATANGGAPAASAGTKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNGEVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLTIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 321          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: ETK91994.1 (hypothetical protein L915_04519 [Phytophthora parasitica] >ETP01562.1 hypothetical protein F441_21214 [Phytophthora parasitica CJ01A1] >ETP29730.1 hypothetical protein F442_21158 [Phytophthora parasitica P10297])

HSP 1 Score: 199.5 bits (506), Expect = 1.700e-47
Identity = 142/339 (41.89%), Postives = 184/339 (54.28%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  ++ D  +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAHXXXXXXXXXXXXXXXXXXXXXXX                                   L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+G   KVW     G +  +  RRW+V+ EL        + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEYE--WNAHQASVWKVEWAHXXXXXXXXXXXXXXXXXXXXXXXLYLNASASSSDTATANGGTPAASAGTKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNGEVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLTIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 321          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: ETL25568.1 (hypothetical protein L916_20602 [Phytophthora parasitica] >ETL78784.1 hypothetical protein L917_20462 [Phytophthora parasitica] >ETO60477.1 hypothetical protein F444_21338 [Phytophthora parasitica P1976])

HSP 1 Score: 199.5 bits (506), Expect = 1.700e-47
Identity = 142/339 (41.89%), Postives = 184/339 (54.28%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  ++ D  +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAHXXXXXXXXXXXXXXXXXXXXXXX                                   L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+G   KVW     G +  +  RRW+V+ EL        + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEYE--WNAHQASVWKVEWAHXXXXXXXXXXXXXXXXXXXXXXXLYLNASASSSDTATANGGTPAASAGTKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNGEVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLMIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 321          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: ETM32055.1 (hypothetical protein L914_20474 [Phytophthora parasitica])

HSP 1 Score: 199.5 bits (506), Expect = 1.700e-47
Identity = 142/339 (41.89%), Postives = 184/339 (54.28%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  ++ D  +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAHXXXXXXXXXXXXXXXXXXXXXXX                                   L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+G   KVW     G +  +  RRW+V+ EL        + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEYE--WNAHQASVWKVEWAHXXXXXXXXXXXXXXXXXXXXXXXLYLNASASSSDTATANGGAPAASAGTKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNGEVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLMIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 321          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: XP_002895620.1 (nucleoporin-like protein [Phytophthora infestans T30-4] >EEY55485.1 nucleoporin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 199.1 bits (505), Expect = 2.200e-47
Identity = 143/339 (42.18%), Postives = 184/339 (54.28%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKESLRG-------------VSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  ++ D  +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAHXXXXXXXXXXXXXXXXXXXXXXXX                    T   S  G             V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+    KVW     G +  +  RRW+V+ EL        + + DV WAP MGR+ HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFVHDMSFDFYGKRLATCSSDRKIKIWEEHGQDWRLEYE--WNAHQASVWKVEWAHXXXXXXXXXXXXXXXXXXXXXXXXYLNVSASSTDPAATNGGSPSTSSGSKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNSEVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRTSHLLATASKDRTVRIWRLTIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 321          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: GAY04474.1 (nucleoporin-like protein [Pythium insidiosum])

HSP 1 Score: 196.4 bits (498), Expect = 1.400e-46
Identity = 148/339 (43.66%), Postives = 193/339 (56.93%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT---LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRWGLSKV-LHRP 338
            S H  +I D  +DFYG R ATCSSD  I+IW++    +W    +   A ++++ +L+WAH  XXXXXXXXXXXXXXXXXXXX         XXXXXXX          L +S   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F           VT +SWN+ RFD PM+VVGG+   +KVW          +  RRW+V+ EL        +   DVAWAP MGRSYHL+A A +D  +RI  L+  +                 +A E   +    +E+WRVEWN+ GT+LASSG+DG VRLW+     + GL +  L RP
Sbjct:   17 SQHGDFIHDMSFDFYGSRLATCSSDRKIKIWEEIAG-EWRLQCE-WNAHQASVWKLAWAHPEXXXXXXXXXXXXXXXXXXXXGAVFNSGNSXXXXXXXTRESWRNQAQLVDSRESVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGVTCISWNQSRFDAPMIVVGGNSEVVKVW-------GYNNSFRRWQVVAELQ----GHTDAXHDVAWAPNMGRSYHLVAAASKDRTVRIWKLKMTDTLQC-------------EAEEVALKHHHDSEVWRVEWNITGTMLASSGDDGTVRLWKTRLGRQLGLRQYDLRRP 324          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: XP_009522840.1 (hypothetical protein PHYSODRAFT_350501 [Phytophthora sojae] >EGZ20123.1 hypothetical protein PHYSODRAFT_350501 [Phytophthora sojae])

HSP 1 Score: 193.7 bits (491), Expect = 9.400e-46
Identity = 146/346 (42.20%), Postives = 189/346 (54.62%), Query Frame = 0
Query:    3 SGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAH--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            S H  +I D  +DFYG+R ATCSSD  I+IW++    +W    +   A ++++ ++ WAH                    XXXX     XXXXXXXXXXXXXXXXXXXXXXXX            L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+    KVW     G +  +  RRW+V+ EL        + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:   12 SQHSDFIHDMSFDFYGKRLATCSSDRKIKIWEEH-GQEWRLEYE-WNAHQASVWKVEWAHPXXXXXXXXXXXXXXXXXXXXXXXYLNGSXXXXXXXXXXXXXXXXXXXXXXXXPGTKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNSDVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLTIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 328          
BLAST of NO23G00510 vs. NCBI_GenBank
Match: ETI31761.1 (hypothetical protein, variant [Phytophthora parasitica P1569])

HSP 1 Score: 193.4 bits (490), Expect = 1.200e-45
Identity = 137/328 (41.77%), Postives = 177/328 (53.96%), Query Frame = 0
Query:   14 YDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKASRSAISRLSWAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------LKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLAHWPLQDSFEGGXXXXXXXXVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGREEGQSGGHGGRRWEVLCELSRGGXXXXEGVRDVAWAPKMGRSYHLIATAGRDNKLRIHTLRREEXXXXXXXXXXXXXXXVHDAVEDTQEIDVGAEIWRVEWNVLGTLLASSGEDGVVRLWRKDQDGRW 329
            +DFYG+R ATCSSD  I+IW++   D  L       A ++++ ++ WAH  XXXXXXXXXXXXXXXXXXXXX                                   L ++   V  V FAP  LGL++A  + DG VR+YEAI+V NL+HWPLQ+ F            T +SWNK RFD PM+VVGG+G   KVW     G +  +  RRW+V+ EL        + + DV WAP MGRS HL+ATA +D  +RI  L  +E                HD           +E+WRVEWNV GT+LASSG+DG VR+W+ D +G W
Sbjct:    3 FDFYGKRLATCSSDRKIKIWEEHGQDWRLEYE--WNAHQASVWKVEWAHPEXXXXXXXXXXXXXXXXXXXXXLYLNASASSSDTATANGGAPAASAGTKEGWRNQAQLVDARDSVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQEEF-----LADKDGATCVSWNKSRFDVPMIVVGGNGEVAKVW-----GYNNSY--RRWQVVAEL----VGHTDAIHDVCWAPNMGRSSHLLATASKDRTVRIWRLTIQEDDHLQADVEEVARKHHHD-----------SEVWRVEWNVTGTMLASSGDDGTVRMWKSDFEGNW 301          
The following BLAST results are available for this feature:
BLAST of NO23G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002297003.11.200e-4835.74predicted protein, partial [Thalassiosira pseudona... [more]
XP_024574829.11.300e-4741.59Nuclear pore complex component (sc Seh1) [Plasmopa... [more]
ETI31760.11.700e-4741.89hypothetical protein F443_21320 [Phytophthora para... [more]
ETK91994.11.700e-4741.89hypothetical protein L915_04519 [Phytophthora para... [more]
ETL25568.11.700e-4741.89hypothetical protein L916_20602 [Phytophthora para... [more]
ETM32055.11.700e-4741.89hypothetical protein L914_20474 [Phytophthora para... [more]
XP_002895620.12.200e-4742.18nucleoporin-like protein [Phytophthora infestans T... [more]
GAY04474.11.400e-4643.66nucleoporin-like protein [Pythium insidiosum][more]
XP_009522840.19.400e-4642.20hypothetical protein PHYSODRAFT_350501 [Phytophtho... [more]
ETI31761.11.200e-4541.77hypothetical protein, variant [Phytophthora parasi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00510.1NO23G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626194gene_8394Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101101g1gene7464Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00510.1NO23G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00510 ID=NO23G00510|Name=NO23G00510|organism=Nannochloropsis oceanica|type=gene|length=2068bp
ATGGACTCGGGCCACGACTACTACATTTTGGATGCAGAGTATGATTTCTA
TGGCCGCCGGTTCGCGACATGCTCTTCCGACCACTCCATTCGCATCTGGG
ATCAAgtaagaccctccctccctccctctctccccccctctctccctccc
tcccccccttttcaccttacttctctcacctttatcccagcaccttagct
cttataaattgtttcatttacagacacttgtcccttcttaacctttgctc
aaatatcacagCAACCCAACGACCAGTGGCTCCCGTCGGCCAAAATCCTC
AAGGCAAGTCGATCCGCTATCTCGCGTCTCTCCTGGGCCCACCCCGAGTA
CGGCACCCTCCTCGCCGCAGCCTCCGAGGACGCTTCCGTCACCATCTGGG
AGGAGCAAACACACCCTTCTTCCCTCCCTTCCTCGTCCTCGTCCTCGTCT
TCCTCTACTTGGGTATGTCGTGTCACATTGAAGGAGTCTCTCCGAGGGGT
GAGCACTGTGGCTTTTGCTCCCCCTTTTTTGGGCTTGCAAATTGCAGCAG
GAGCAGCCGATGGGATGGTGAGGGTATATGAAGCTATTGAGGTCACGAAC
CTCGCGCACTGGCCGTTGCAAGACTCGTTTGAAGGAGGTCGGGAGGGCGG
GAGGGAGGGGGGAGTGACCTCGCTCTCTTGGAATAAATGCCGCTTTGATC
CGCCGATGATGGTGGTGGGAGGAAGTGGGGGAGGGATAAAGGTGTGGGTG
GGGAGGGAGGAAGGGCAGAGCGGAGGCCATGGGGGAAGGAGGTGGGAGGT
GTTGTGTGAGTTGTCGAGAGGGGGAGGGGGAGGGGGGGAAGGTGTGCGTG
ACGTGGCTTGGGCACCGAAGATGGGAAGGAGCTATCATTTGATTGCGACG
GCAGGCAGGGACAATAAATTAAGAATTCACACCTTGAGGAGAGAGGAGGA
GGAGGAGAGGGAGGGAGAGAGGCGGGGAGGGAGGAGGAGGTGGGTGCATG
ATGCAGTGGAGGACACCCAGGAGATCGACGTCGGTGCAGAAATATGGCGC
GTGGAATGGAATGTCTTGGGGACGCTGTTGGCATCATCAGGGGAGGATGG
TGTGGTGCGGCTGTGGAGGAAGGATCAGGACGGACGGTGGGGCCTGAGCA
AGGTGCTGCACCGGCCGTCGGGACGGACGAGGGGGGAGGGCGTGGTGTTG
ATGAACAAGTGAGTGGAGGGGGGTAGAGGGGGCGTAGCGTCCAGAAAGAG
AGGATTCAACCAAGGGAGGAGACATCTGAATGCAGGGAAATGAGAGGATC
TGGAGTGGGAAAAATATTGAGAATGACATGGCAGGGCTGGAAGGCGACGA
CACGAACCGCACCCTGCTACCCGGATGTAGTGAGAAGTCGCCGAACGAGA
GAGAATGAGGGACCAAGCAAAGCACAGCGAAGGGAAGCAAATAAAGACAG
TGTTTAGAGGCCAATCACTCTAGAGGAGGCGAAGCCGAGTGTTTCTTGCT
CCTTGCTTCTTCTTTGTCGTCGTCTGGTTCCATTTTCTCCTTCCGTCGTC
CCCCCCTTCCTCTTCTCCTTCCTCCTCTTCTCCTTCCTCCTCTCCCGCGC
CTCCCTACCCATTCCCCCCTTTCGCAAGGAGAGCAGACACAGGGCTCAAC
GCCCACAATGCGTCAGGAGGACGACTGGCCAGCAAGGCCACAAGCCGGAG
GCTTTGACACCTATTCCCAATCCTATCACTGCCTAGAAACCTTCTATCTC
TTCTCTTCTGTCGATAAGAAATAAGAAGGCAAGGTCCTCGCACCCTCTAC
TCCATCCCACCCTCTTCCCTCTCTCCCTCCCTCTTAAAGATATGATTGAT
CCTGTGCTTGTTTTCTGACTAAGGACTCACTGCGCAGGAATGACGAAGGT
AAGAGGGAAATAAAATAGTTAGTACTGTATTAGATACCTTAGGGGGAAAT
GCGCTGCCCGAGGACCGGCAGGTAGGCAGGGAGGGAGGGCGTGAGGGCGT
GACTGTCCATCCACGTGTGTGTGTTCTTGGCTCAACACACACGAAAGCAC
TGATGGACCATCCTTCAA
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protein sequence of NO23G00510.1

>NO23G00510.1-protein ID=NO23G00510.1-protein|Name=NO23G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MDSGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKA
SRSAISRLSWAHPEYGTLLAAASEDASVTIWEEQTHPSSLPSSSSSSSSS
TWVCRVTLKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIEVTNLA
HWPLQDSFEGGREGGREGGVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGR
EEGQSGGHGGRRWEVLCELSRGGGGGGEGVRDVAWAPKMGRSYHLIATAG
RDNKLRIHTLRREEEEEREGERRGGRRRWVHDAVEDTQEIDVGAEIWRVE
WNVLGTLLASSGEDGVVRLWRKDQDGRWGLSKVLHRPSGRTRGEGVVLMN
K*
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Synonyms
Publications