jgi.p|Nanoce1779_2|626194, gene_8394 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626194
Unique Namegene_8394
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_24:163820..165451 +

Link to JBrowse

Properties
Property NameValue
TranscriptId626280
ProteinId626194
Product namenucleoporin-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:163820..165451 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL039ncniL039Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00510NO23G00510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626194mRNA_8394-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626194mRNA_8394Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626194

>mRNA_8394-protein ID=mRNA_8394-protein|Name=jgi.p|Nanoce1779_2|626194|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MDSGHDYYILDAEYDFYGRRFATCSSDHSIRIWDQQPNDQWLPSAKILKA
SRSAISRLSWAHPEYGTLLAAASEDASVTIWEEQTHPSSLPSSSSSSSSS
TWVCRVTLKESLRGVSTVAFAPPFLGLQIAAGAADGMVRVYEAIDVTNLA
HWPLQDSFEGGREGGREGGVTSLSWNKCRFDPPMMVVGGSGGGIKVWVGR
EEGQSGGHGGRRWEVLCELSRGGGGGGEGVRDVAWAPKMGRSYHLIATAG
RDNKLRIHTLRREEEEEREGERRGGRRRWVHDAVEDTQEIDVGAEIWRVE
WNVLGTLLASSGEDGVVRLWRKDQDGRWGLSKVLHRPSGRTRGEGVVLMN
K*
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Synonyms
Publications