NO23G00240, NO23G00240 (gene) Nannochloropsis oceanica

Overview
NameNO23G00240
Unique NameNO23G00240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3706
Alignment locationchr23:100109..103814 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:100109..103814 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO23G00240 vs. NCBI_GenBank
Match: OQR82304.1 (hypothetical protein ACHHYP_16244 [Achlya hypogyna])

HSP 1 Score: 160.6 bits (405), Expect = 1.100e-35
Identity = 101/255 (39.61%), Postives = 143/255 (56.08%), Query Frame = 0
Query:   10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKE-KAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGL 264
            L   +R A + E FDLGG  EA+   ++ +AF+ PFE L +MVRLTFVVGGGK VR+RY + +PKW +NAL+ + F+ED+SAA  +  AG FK  HDTG+NLK+I+VFP +         P K    G A  A       +       I+S     F  ++  + PSW QK+R +K  +    E F  +EAKM+RGE L  +E A Y+  + ++  + K       +K  VD  QLT ++K+ LL  M   +D L
Sbjct:    4 LAGEIRLATENEQFDLGGYTEARTRDLVVAAFSAPFE-LPDMVRLTFVVGGGKLVRSRYPEELPKWMTNALREVGFVEDRSAACTMDCAGMFKQQHDTGQNLKTILVFPKMLA-------PTK----GKAASAPSATVVTIDDMPELQILSCDPDDFKALVRLELPSWRQKKRAVK-FIHDAMEEFALLEAKMVRGEILDAAEQAKYDGNAGAEANDAKVAHLQAEIKRMVDDKQLTASEKKELLATMTANVDAL 245          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_008880507.1 (hypothetical protein H310_14428 [Aphanomyces invadans] >ETV90871.1 hypothetical protein H310_14428 [Aphanomyces invadans])

HSP 1 Score: 160.2 bits (404), Expect = 1.400e-35
Identity = 100/256 (39.06%), Postives = 143/256 (55.86%), Query Frame = 0
Query:    8 HSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMT-SKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYE-ELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRID 262
            H L   +R AV +E FDLGG  EA+   ++ +AF TP    TEM+R TFVVGGGK VRARY + +PKW + AL+ + F+ED+S+A  L S G +K   DTG NL +I VFP +A A     + E E++  A  V               + +S  +  F  M+  +K  SW QK+R LK L   +Q AF+ +E K++RGE L   E  +Y+  +      EK  W    +K  VD+G LTKA+KE +L  ++  ++
Sbjct:    5 HGLAGDIRQAVASEQFDLGGFTEARTRDLVVAAFGTPLTAPTEMIRFTFVVGGGKLVRARYSEQLPKWMTAALREVGFVEDRSSACTLDSQGTYKQQKDTGANLLTIQVFPRLALAPSSTYDCELEDKQAAVDV----------DSPEYLCISSDLETFQRMIVPAKARSWVQKKRLLKALQASMQ-AFQHLEEKLVRGENLLPVEQLMYDGNIGLEVNTEKCTWLQGEIKRMVDEGHLTKAEKEDVLATLQQNLE 249          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_008880508.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV90872.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 160.2 bits (404), Expect = 1.400e-35
Identity = 100/256 (39.06%), Postives = 143/256 (55.86%), Query Frame = 0
Query:    8 HSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMT-SKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYE-ELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRID 262
            H L   +R AV +E FDLGG  EA+   ++ +AF TP    TEM+R TFVVGGGK VRARY + +PKW + AL+ + F+ED+S+A  L S G +K   DTG NL +I VFP +A A     + E E++  A  V               + +S  +  F  M+  +K  SW QK+R LK L   +Q AF+ +E K++RGE L   E  +Y+  +      EK  W    +K  VD+G LTKA+KE +L  ++  ++
Sbjct:    5 HGLAGDIRQAVASEQFDLGGFTEARTRDLVVAAFGTPLTAPTEMIRFTFVVGGGKLVRARYSEQLPKWMTAALREVGFVEDRSSACTLDSQGTYKQQKDTGANLLTIQVFPRLALAPSSTYDCELEDKQAAVDV----------DSPEYLCISSDLETFQRMIVPAKARSWVQKKRLLKALQASMQ-AFQHLEEKLVRGENLLPVEQLMYDGNIGLEVNTEKCTWLQGEIKRMVDEGHLTKAEKEDVLATLQQNLE 249          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_002297116.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86584.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 152.9 bits (385), Expect = 2.300e-33
Identity = 116/370 (31.35%), Postives = 184/370 (49.73%), Query Frame = 0
Query:   14 VRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLK--DLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGL--EKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRKHALLSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKASKKK 380
            +R++ +++TFDLGG + + +   + +AF++PF  L +M+R+TFVVG GK  RA+YD+   +  ++ LK ++++ED+ A+      G FK  HDTGKNLK++VVFP I+   G     + +NE G   +         T      I   + + F +++++ CP++SQK++ L+  D LL L++A   IE KMMRG  L   E A Y+   AS LKEK     +     VD+G+LT  +K  L+   E RI  L  EK                                                 L    AL     D  KGRLL+++E K  +  + +E++I  L E S G+FE ++  ++R + S+ K
Sbjct:   15 IRSSTESDTFDLGGHSASNIETTIHAAFSSPFA-LDDMIRITFVVGAGKLGRAKYDEKAMQAVTSTLKSLDYVEDRGASCVKECGGSFKLQHDTGKNLKTVVVFPNISDVHGKEARKKTKNEEGEPLIP--------TNSPGYSIAVSNHSTFKNLLSNFCPTYSQKKQCLRCLDGLLQLEQA---IEEKMMRGNPLDSGEQAFYD--VASDLKEKIAHVKEEAGRHVDEGKLTIEEKNTLVSLNENRIKTLMNEKNSASVAEQLKKALARKEQLQSLTDDMLRMTASYPPPLRYESQINTLRKKLLPLQAL----EDSSKGRLLTLSETKALTGKEEIEQEIERLEEASYGWFEEEDAFRERIQQSRDK 366          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_002179900.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48886.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 152.1 bits (383), Expect = 3.900e-33
Identity = 117/368 (31.79%), Postives = 172/368 (46.74%), Query Frame = 0
Query:   10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFR-KHALLSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKAS 377
            L   +R AVD ETFDL G N + + + +  AF   F  L E +RLTFV G GK  R +YDD   K  ++ L+ + + ED         AG FK  HDTGKNLK++VV+P ++ +GG     E EN    A  A    ++A        I   S  VF  M+ SKCP+WSQK +G    +  ++   + +E K++ G  LS+SE   Y+ +S + L+EK     + M AQVD G++T  +K  LL Q+  R+  L K                                                   R + A L +  +  KGRLL++ E +     D ++E+I  L   S+G+FESD+    R +A+
Sbjct:    8 LAASIRRAVDNETFDLAGKNASTIENAVQDAFREAFA-LPETIRLTFVTGAGKLARQKYDDGAAKAITSPLRELGYQEDHG-----GGAGTFKLQHDTGKNLKTVVVYPHVSKSGG-----ESENTTQVATAALLAEDSA-----EYKIAYSSANVFQRMVESKCPTWSQK-KGCVAAVETVKSMVQVLETKLLTGTPLSESEQDFYDAVSITSLEEKLTLLKELMHAQVDTGKITSREKIELLAQVNDRLATLRKDIVEAESEGKAKRVDNLKNVQTKATARKEKLESISPQAPPLLKNILEINKLRTEMAPLLEMEENAKGRLLTLKESQAIGRKDEIQEEIEDLERSSRGWFESDDAFATRVEAA 358          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_002290118.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91870.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 151.8 bits (382), Expect = 5.200e-33
Identity = 113/365 (30.96%), Postives = 173/365 (47.40%), Query Frame = 0
Query:   14 VRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEEL-SASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRKHAL-LSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKAS 377
            +R+A +++TFDL G + + +   ++SAF  PF NL+E++R+TFVVG GK  R++YDD      ++AL+ + ++ED+ A+      G FK  HDTGKNL ++VVFP +   G  G   E  N GG   +          G     ++  S A F  M+ S  PSWS+K +   +LL    +  E ++ K+M G  LSD E A Y+++  A  +  K E   + M+ QV+ G LT  ++  L+ Q+  R++GL                                                     +K    L K     KGRLL+V E K  +E D L E+I  L   S+G+FE ++    R +AS
Sbjct:   12 IRSATESDTFDLAGHSPSNIETTVTSAFTDPF-NLSEIIRITFVVGAGKLGRSKYDDKASLHVTSALRQLGYVEDRGASCVNECGGSFKTQHDTGKNLFTVVVFPKLVQEGDNG--GESNNTGGGNSMEYPIPIPLFEGSALHTVLLSSEATFEKMVPSMAPSWSEK-KFCSELLKDSLDTVEQMDGKLMTGTPLSDDEQAFYDDVGGALVIGSKLECIKKQMQQQVEAGALTADERNNLIHQVSERLEGLNDEIESALQKSQEKKVAKLNMQREKAEARRKMLVGHSPQPTHKLKHEDQIMTLKKRLQPLLKLEASAKGRLLTVKETKTLAEKDELLEEIEELELASQGWFEEEDVFMVRLEAS 372          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: OEU10280.1 (hypothetical protein FRACYDRAFT_247895 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 151.8 bits (382), Expect = 5.200e-33
Identity = 113/370 (30.54%), Postives = 169/370 (45.68%), Query Frame = 0
Query:   10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVD-KGQLTKADKERLLQQMEGRIDGLEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRKH-ALLSKERDGIKGRLLSVAEVKKFSEIDRLEEQIAALVEESKGFFESDEEVQDRAKASK 378
            L  H+R++ +++TFDL G N + +T  +  AF  PF  L  M+R+TFV G GK  R +YDD   +  ++ L+   F ED+ A+      G FK  HDTGKNLK+IVVFP I      G                        G   +MI    +++F ++++S+C SWSQK +G    +  +QE   ++E ++M G  L D+E ALY+ +S   L EK      AM  Q++  G +T  +++ LL Q+  R+  +E                                                    RK  A L K  DG KGRL+SV E +  +  D + E+I  L + S+G+FE D     R K S+
Sbjct:    5 LAAHIRSSTESDTFDLAGQNPSTITVNIEQAFKDPFP-LDSMIRITFVTGAGKLGRQKYDDGCARAVTSTLRSCGFEEDRGASCVRECGGFFKQQHDTGKNLKTIVVFPNIREIDDHG-XXXXXXXXXXXXXXXNLLLLFQPGSPEEMIALSPISMFSNLLSSRCQSWSQK-KGCNAAIANIQETISNLEQRLMEGVALDDNEQALYDVVSVDDLNEKHSIVKDAMHKQIEIDGDITIEEQKSLLGQVSDRLSIIEDDLNEAKTEKKTKKVEKLTIAKTKVEQREVMLKKISPKIPQRLKHQDEILELRKELAPLIKLEDGAKGRLMSVKETQTLARKDEILEEITELEDSSRGWFEDDVSFDLRVKRSR 371          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_008615417.1 (hypothetical protein SDRG_11165 [Saprolegnia diclina VS20] >EQC31244.1 hypothetical protein SDRG_11165 [Saprolegnia diclina VS20])

HSP 1 Score: 151.0 bits (380), Expect = 8.800e-33
Identity = 94/256 (36.72%), Postives = 144/256 (56.25%), Query Frame = 0
Query:   10 LVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVF-PDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKE-KAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRIDGL 264
            L   +RAA ++E FDLGG  EA+   ++ +AF   FE ++EM+R TFVVGGGK VR+RY + +PKW +NAL+ + F+ED+SAA  +   G FK  HDTG+NLK+I+VFP +               GG    A      +V      +++S  +  F   ++  + PSW QK+R +K +   + E F  +EAKM+RGE L  +E A Y+  +  +  + K       +K  VD+ QLT ++K+ L+  +   +D L
Sbjct:    4 LAGEIRAATESEQFDLGGYTEARTRDLVVAAFGAAFE-ISEMLRFTFVVGGGKLVRSRYPEELPKWMANALRDVGFVEDRSAACTMDCQGMFKQQHDTGQNLKTILVFPKVVATA----------TGGKTAAAAPIAIPSVDETPELLMLSCEVDDFIKTLVPLELPSWRQKKRAVKFIQDAMAE-FALLEAKMVRGEILDAAEQAAYDGNAGQEANDAKIAHLQAEIKRMVDEKQLTASEKKELVATVTANVDAL 247          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: XP_009845368.1 (hypothetical protein H257_18055 [Aphanomyces astaci] >ETV65163.1 hypothetical protein H257_18055 [Aphanomyces astaci])

HSP 1 Score: 151.0 bits (380), Expect = 8.800e-33
Identity = 96/256 (37.50%), Postives = 138/256 (53.91%), Query Frame = 0
Query:    8 HSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMT-SKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYE-ELSASQLKEKAEWTSQAMKAQVDKGQLTKADKERLLQQMEGRID 262
            H L   +R AV  E FDLGG  E +   ++ +AF TP    TEM+R TF+VGGGK VRARY + +PKW + AL+ + F+ED+SAA  L   G +K   DTG NL +I VFP +  A G G E + E++     V               + +S  +  F  M+  +K  SW QK+R LK  L     AF+ +E K+MRGE L   E  +Y+  +      EK  W    +K  VD+G LTKA+K+ ++  ++  ++
Sbjct:    5 HGLAGDIRQAVANEQFDLGGFTEPRTHDLIVAAFGTPLTAPTEMIRFTFIVGGGKLVRARYSEQLPKWMTAALREVGFVEDRSAACTLDCQGTYKQQKDTGANLLTIQVFPRLTLAVGTGGE-DLEDKPATVDV----------DSPEYLCISSDLETFQRMIVPAKARSWVQKKRFLK-ALQGSMTAFQHLEEKLMRGEALMPVEQLMYDGNIGLEVNTEKCVWLQGEIKRMVDEGHLTKAEKDEVIATLQQNLE 248          
BLAST of NO23G00240 vs. NCBI_GenBank
Match: OQS04755.1 (hypothetical protein THRCLA_03028 [Thraustotheca clavata])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 93/251 (37.05%), Postives = 145/251 (57.77%), Query Frame = 0
Query:   14 VRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTEMVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGCFKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAVTGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEAKMMRGEQLSDSESALYEELSASQLKEKAEWTSQA-MKAQVDKGQLTKADKERLLQQMEGRIDGL 264
            +R   ++E  DLGG  EA+   ++++AF+ PFE L EM+R TFVVGGGK VR++Y + +PKW + AL+ I F+ED+SAA      G FK  HDTG+NLK+I+VFP +          EK+        A G    +V      +++S  +  F  ++  + PSW+QK+R ++ +   + E F  +EAKM+RGE L+++E A Y+  +  ++        QA +K  VD G+LT  +K+ L+  M   +D L
Sbjct:    4 LRQVTESEQVDLGGYTEARTRELVTAAFSEPFE-LNEMIRFTFVVGGGKLVRSKYPEELPKWMTGALRDIGFLEDRSAACTWDCQGTFKQQHDTGQNLKTILVFPKVV---------EKKASSAEQPAAKG---PSVQEIPELLLLSCDLEDFEKLLPLELPSWTQKKRAVRFIQDAMNE-FALLEAKMVRGEILTEAEQAQYDGNAGQEVNAAKLTRLQAEIKKHVDDGRLTANEKKELVATMTSNVDAL 240          
The following BLAST results are available for this feature:
BLAST of NO23G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQR82304.11.100e-3539.61hypothetical protein ACHHYP_16244 [Achlya hypogyna... [more]
XP_008880507.11.400e-3539.06hypothetical protein H310_14428 [Aphanomyces invad... [more]
XP_008880508.11.400e-3539.06hypothetical protein, variant [Aphanomyces invadan... [more]
XP_002297116.12.300e-3331.35predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002179900.13.900e-3331.79predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002290118.15.200e-3330.96predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU10280.15.200e-3330.54hypothetical protein FRACYDRAFT_247895 [Fragilario... [more]
XP_008615417.18.800e-3336.72hypothetical protein SDRG_11165 [Saprolegnia dicli... [more]
XP_009845368.18.800e-3337.50hypothetical protein H257_18055 [Aphanomyces astac... [more]
OQS04755.11.100e-3237.05hypothetical protein THRCLA_03028 [Thraustotheca c... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00240.1NO23G00240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|655614gene_8361Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00240.1NO23G00240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00240 ID=NO23G00240|Name=NO23G00240|organism=Nannochloropsis oceanica|type=gene|length=3706bp
ATGGCGGAAGAGCAACAGCATCATTCCCTCGTGAAGCACGTCCGgtacgt
cttgcctgcttcagggagagagggaggggaggaaggaggggacggcaagc
gggtagatagcaaggtcgtgatcatcgtcgtccagctcactcatgtgcac
tcatgtgcgtccacctcatatacaaatagAGCCGCGGTCGATGCCGAGAC
CTTTGACTTGGGTGGCTTGAACGAGGCGCAAgtaagtagaggggaggcaa
gggctggaagaaggtagggcttgagggaggggcggtaggcatgccgctgc
ggtagacgtatttcacattctcatcctctgtaacagGTCACACATATTCT
GTCTAGTGCCTTCGCCACCCCTTTCGAGAACCTGACGGAAATGGTGCGAC
TGACCTTTGTGGTAGGAGGGGGGAAAGGCGTCAGGGCCCGTTACGACGAT
AGCATGCCGgtaagagggagagagaggaggagggagagggagagaaagag
aggccactcacacaagaacgcgagggtgatactgaaagacggaggaagga
gaaaaggaagggaaagaaaggccactcacacaagaacgcgagggtgatat
tgaaagagggagagagggggaagggagggaaaggaaggcccatcaaaaat
atatgcgagactgctatcgaatgagaaagatatgtgatatttgttctatc
tcacctttgtctttttctccctcctccatcagAAATGGTGCTCTAATGCT
CTGAAGGGTATCAATTTTATTGAGGACAAGTCGGCTGCCAACGACCTCGC
ATCCGCTGGATGTTTCAAATTTCACCATGACACGGgtacgtccctccctc
cctccctccctccctacctccctcccttcctccctgttctccctgccgta
ccgtcctccctccctgcccacacccccttcctatctttctttcctcccct
tctctgcccctgcagcgctggacatggcttctgcgaatgcatgactcccc
tgtccccctccttccctcctcccccctccccgtttttctctctcaaaaaa
acaaatagGCAAAAACCTTAAGTCCATCGTCGTCTTCCCCCTTATCGCGG
GCGCCGGGGGGCCAGGAGAGgtagggaaagagggagggagggagggaggg
agggaggaagggatgcacccgacaatcagtccatctgttgagttctcatc
cccgtgtgctcaatttcgtctttcaattccttgcctccctccctcttgtc
ctcctcttcctccctcccctccctccctccctccctcccctccctccctc
tctctctctcccacctaaacgtcagGAACCTGAGAAGGAGAACGAAGGGG
GAGCAGCAGGAGTAGCAGGAGGGTTCAATGAAGCGGCTGTGACAGGAAAA
GAGCGGGACATGATCGTTTCCATCTCGgtacgctgcttttccccttcctc
cctccgtccctccctccttccctccctcccctccctccctccctcccgtc
cctccgtccctcctctctccctcggatggccgtcttttccgacactatgc
tttccgaatgccagtcctccaccccctccctccctccctccctccctccc
tccctccctccctcagATGGCCGTATTTCCCGACATGATGACCTCCAAAT
GTCCCTCCTGGTCGCAGAAGCAACGGGGTCTCAAAGATTTGCTCCTGCCG
CTACAGGAAGCCTTTGAATCCATCGAGgtacgtacgccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ctcttcctcttgattgcgaggatgtaagcctctgcgggtcagttagcgct
gatctctcctccctccctccctccctccctccctccctccctcccaccct
ttccccccttcctccctcccttctgctctagGCCAAGATGATGCGCGGGG
AACAGCTGTCGGACAGCGAGAGTGCTCTCTACGAGGAACTGAGTGCCAGT
CAGCTAAAGGAAAAAGCAGAGTGGACTAGTCAGGCCATGAAGgtacgccc
tccctccctccctccctccctccctccctccctccctccctccctctctt
ccttcccccctccgtttctccttccttccctccctcccttccctccccat
catgctcttacctcgtcgagcccgtcatgctattccgacgcctacatctc
ccatgtgcttcccaaacaccttattttaccctcgaatcccttcccctccc
tccctccctccctccctccctccctccctcccgcagGCCCAAGTGGACAA
GGGGCAGCTGACCAAAGCGGATAAGGAGCGGCTGCTGCAGCAGATGGAGG
GCAGGATTGATGGGCTGGAGAAGGAGAAGGCGGATGCGAAAGAGGCAGGG
AAGGAGAAGAAGgtgaggaaggaagggacggagggatggagggagggaag
gagggaaaaaaaagaagagttaagaatatttatcgcgtataggtttgatc
gcccctccctccctccctccctccctccctccctccttcctcagGTCCTG
AAGCTGGAGGAGCAGATCAAGACGCTAAGGGAGCGAAAGGAGAAGGCCGT
CCAGATCGCCATTATGGTGCACAATTTGAAGCGGGAGgtgagggagggag
ggagggagggagggaggaagggagggagggagggagggagggagggagga
ggtccgaaataaagtgcatgggtgtgtggggaatatgagtttcagaatga
cgcgctcgggaagatcaaaatcaagatgaaggcaaaaagagggaggaaag
gagggaaggagagcaggaggacaggagagcgaggagggtggaggaaggat
taaattccaagcgttgcctcaatactcacccctccctccctcagGCCGAG
CTCAAGCCCCTCTTCCGCAAGCACGCCCTCCTAAGCAAGGAGAGGGATGG
GATCAAAGGTCGTCTCTTGTCGGTGGCAGAGGTGAAGAAATTCTCGGAAA
TAGACCGCCTGGAGGAGCAGgtagggagggagggagggagggagggagta
agggggagagggagggagggagggggggagagatgggatcagtggaggag
gggcggtggactggacgcatttcttacgggggaggtgatgagggaaggac
ggaaagagggaaggagacaagcgaacagtaaatcttctcaagctatacgc
ttcacaaaccgcccctccctccctccctccctccctcagATCGCCGCCCT
GGTGGAGGAGTCCAAAGGCTTCTTCGAGAGTGACGAGGAGGTGCAAGATC
GGGCCAAGGCCAGCAAGAAAAAGgtaggccgtttcttccctccctccctc
cctccctccctccctccctccctccctccctctatccctccctccctctt
tccctcccatgctccctccctccctccctccctccttcccttctcccctc
ctttcttctccctgctcccgatccctcccatcgttccatcacccatccct
ccctccctcagGCGTTGGCAGGTTACAAGGGCGAACCGGCCAAGAAGACA
GGAGGCGCAACGAAGAGCACCAGTGGGGGCGGATGGGCCAGCGTGGGAGG
GAAGGGGGGAGGGAGGGGCGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGGAAAAAGCCCGGAAATGCATTTGCGGCGCTTGGGGATGATAGT
GATTAG
back to top

protein sequence of NO23G00240.1

>NO23G00240.1-protein ID=NO23G00240.1-protein|Name=NO23G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MAEEQQHHSLVKHVRAAVDAETFDLGGLNEAQVTHILSSAFATPFENLTE
MVRLTFVVGGGKGVRARYDDSMPKWCSNALKGINFIEDKSAANDLASAGC
FKFHHDTGKNLKSIVVFPLIAGAGGPGEEPEKENEGGAAGVAGGFNEAAV
TGKERDMIVSISMAVFPDMMTSKCPSWSQKQRGLKDLLLPLQEAFESIEA
KMMRGEQLSDSESALYEELSASQLKEKAEWTSQAMKAQVDKGQLTKADKE
RLLQQMEGRIDGLEKEKADAKEAGKEKKVLKLEEQIKTLRERKEKAVQIA
IMVHNLKREAELKPLFRKHALLSKERDGIKGRLLSVAEVKKFSEIDRLEE
QIAALVEESKGFFESDEEVQDRAKASKKKALAGYKGEPAKKTGGATKSTS
GGGWASVGGKGGGRGGGGGGGGGGGGGGKKPGNAFAALGDDSD*
back to top
Synonyms
Publications