NO23G00170, NO23G00170 (gene) Nannochloropsis oceanica

Overview
NameNO23G00170
Unique NameNO23G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2202
Alignment locationchr23:79858..82059 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:79858..82059 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO23G00170 vs. NCBI_GenBank
Match: XP_005852517.1 (hypothetical protein NGA_0683000, partial [Nannochloropsis gaditana CCMP526] >EKU23314.1 hypothetical protein NGA_0683000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 406.4 bits (1043), Expect = 1.400e-109
Identity = 206/320 (64.38%), Postives = 238/320 (74.38%), Query Frame = 0
Query:  193 YYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEG-TRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAYDLFFRAYEA 512
            YYHFKSQ+LLD+S G EPV+L L E          +  +  A ERE+E   + LPS LASK V V+  AE+ G + G  +G+ WLPLPG  SFT KHLEALR G  ++R T +RPP FFCHGAHEWAMLYHP SS HPPP KYQD+LPLRI Q  LN FVE RP+RCTH+DAFRFF P+ARPLN++  DLS+ R  GQ  HEQPGCLHANMDLFKWAVKLGPYAPSDLL +TL LAVACRVVDMRASPYDL+ L    G   + +    GY F  SPIKIETEEGR+EYQAEQQ LF++AQPLR RL+  YDLFFR +E+
Sbjct:    1 YYHFKSQSLLDYSAGGEPVVLLLGEAGSEGD---TQRDSGGAGEREKEEATDCLPSILASKVVPVQ--AEKAGAKYGMVQGVGWLPLPGRVSFTRKHLEALRLGREILRTTQSRPPFFFCHGAHEWAMLYHPTSSAHPPPRKYQDSLPLRISQTTLNGFVESRPIRCTHYDAFRFFAPEARPLNVWGQDLSEARSHGQLAHEQPGCLHANMDLFKWAVKLGPYAPSDLLRQTLELAVACRVVDMRASPYDLSPLVLPVG---KGRGLPSGYRFDASPIKIETEEGRKEYQAEQQALFDKAQPLRTRLLNVYDLFFRMWES 312          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: EWM28937.1 (hypothetical protein Naga_100511g2 [Nannochloropsis gaditana])

HSP 1 Score: 280.0 bits (715), Expect = 1.500e-71
Identity = 136/192 (70.83%), Postives = 153/192 (79.69%), Query Frame = 0
Query:  319 MLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAYDLFFRAYE 511
            MLYHP SS HPPP KYQD+LPLRI Q  LN FVE RP+RCTH+DAFRFF P+ARPLN++  DLS+ R  GQ  HEQPGCLHANMDLFKWAVKLGPYAPSDL+ +TL LAVACRVVDMRASPYDL+ L    G   + +    GY F  SPIKIETEEGR+EYQAEQQ LF++AQPLR RL+  YDLFFR +E
Sbjct:    1 MLYHPTSSAHPPPRKYQDSLPLRISQTTLNGFVESRPIRCTHYDAFRFFAPEARPLNVWGQDLSEARSHGQLAHEQPGCLHANMDLFKWAVKLGPYAPSDLVRQTLELAVACRVVDMRASPYDLSPLVLPVG---KGRGMPSGYRFDASPIKIETEEGRKEYQAEQQALFDKAQPLRTRLLNVYDLFFRMWE 189          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: CBN78709.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 230.7 bits (587), Expect = 1.000e-56
Identity = 137/369 (37.13%), Postives = 193/369 (52.30%), Query Frame = 0
Query:  145 GINPEEMTCLPRAAWEAKAREHKSRMLALMGGSTRHDHGNPIFNFLFEYYHFKSQALLDFSVGIEPVILSLDE--ENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHP--PPHKYQDALPLRIPQQVLNRFVEER--PMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEG----YAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAYD 504
            G+   +   L R AW A+A  H+ R+ +L  GS  HD  +PIFNFLFEYYHFK + LL ++ G +  +L  D   +  P   K  +    A       G+D        ++ V V+   +                                   +++ATT+R P+  C G HEWAMLY P  +             LPLR+ Q  +N  VE R   + CTHFDAFRFFTP+A+PLN       Q   +GQ  ++QPGC+HANMDLFKWA++L P  PS+ L   L LAV+CR++DMRASPYDLT   ++    + +   + G     A+  +P++IETEEGR+EYQ  Q  L++R+ P+R  L++  D
Sbjct:   94 GVEVSQREVLSREAWMARAEAHRKRVRSLTNGSVHHDKSDPIFNFLFEYYHFKPRMLLQWTPGFDAYLLDADPSLKGCPLPQKAWESGPGAGGSYNPFGLDN-------NRRVQVQWMRD-----------------------------------LLQATTSRAPVLHCFGLHEWAMLYRPRGAEEAGIDARSVHQTLPLRVSQDEINAMVEGRGGALACTHFDAFRFFTPEAKPLNPV-----QLERVGQRSNDQPGCVHANMDLFKWALRLWPLLPSEKLANALELAVSCRMLDMRASPYDLTAHGKVPDTVVGRGGGRVGGLPPEAWDPTPVRIETEEGRKEYQQAQAELYQRSMPVRRSLMRHMD 415          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: KOO23409.1 (conserved unknown protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 223.8 bits (569), Expect = 1.300e-54
Identity = 143/358 (39.94%), Postives = 189/358 (52.79%), Query Frame = 0
Query:  159 WEAKAREHKSRMLALMGGSTRHDHGNPIFNFLFEYYHFKSQALLDFSVGIEPVILSLD-EENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAYDLFFRAYEAGREE 516
            W   A  H++RML+L+GGS   D  NPI+NF+F YY F  + LL +S G   V+  +  +E D   G+        +A  +                                      P+    S  +  + A      +MRAT+ R P   C+G HEWAMLY PP ST     KYQ+ LPLR+ Q  LN  VE  P+ CTHFDAFRFFT  A PLN      S+     QA  EQPGC+HA+MDLF++++KL P+ P++LL +TL LA+A RV+DMRASPYDL+           Q Q     +F +SP++IET EGR+ YQ EQ  L   AQPLRARL++ YD     +E+   E
Sbjct:   19 WRDAAEAHRARMLSLIGGSLNVDLSNPIYNFIFVYYSFDQKLLLRYSPGAGVVLKGVGVKEEDLWTGRGYVSYGDGSARMD--------------------------------------PMLCKPSMRNGAVTA----ASIMRATSGRAPHLNCYGLHEWAMLYQPPGST-CHLSKYQE-LPLRVSQAELNAVVESMPLACTHFDAFRFFTAPATPLNTISPTPSRAT---QAQLEQPGCVHASMDLFRYSLKLWPWLPAELLADTLELAIASRVLDMRASPYDLS-----------QWQGGAAGSFDLSPVRIETAEGRKLYQREQSRLASWAQPLRARLLREYDSAIAVWESAEAE 318          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: XP_005852412.1 (hypothetical protein NGA_0700800, partial [Nannochloropsis gaditana CCMP526] >EKU23419.1 hypothetical protein NGA_0700800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 203.0 bits (515), Expect = 2.300e-48
Identity = 103/173 (59.54%), Postives = 123/173 (71.10%), Query Frame = 0
Query:  192 EYYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEG-TRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDA 364
            +YYHFKSQ+LLD+S G EPV+L L E      G   ++ +  A ERE+E   + LPS LASK V V+  AE+ G + G  +G+ WLPLPG  SFT KHLEALR G  ++R T +RPP  FCHGAHEWAMLYHP SS HPPP KYQD+LPLRI Q  LN FVE RP+RCTH+DA
Sbjct:    3 QYYHFKSQSLLDYSAGGEPVVLLLGEAGSE--GDIQRD-SGGAGEREKEEATDCLPSILASKAVPVQ--AEKAGAKYGMVQGVGWLPLPGRVSFTRKHLEALRLGREILRTTQSRPPFLFCHGAHEWAMLYHPTSSVHPPPRKYQDSLPLRISQTTLNGFVESRPIRCTHYDA 170          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: WP_068124269.1 (3-methyladenine DNA glycosylase [Rhodothermaceae bacterium RA] >ARA95159.1 3-methyladenine DNA glycosylase [Rhodothermaceae bacterium RA])

HSP 1 Score: 198.0 bits (502), Expect = 7.500e-47
Identity = 133/357 (37.25%), Postives = 171/357 (47.90%), Query Frame = 0
Query:  157 AAWEAKAREHKSRMLALMG---GSTRHDHGNPIFNFLFEYYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAYDLFFRAYE 511
            A W+A+ R H++R+  ++            +P+ +FLFEYY F+   LL +S G+              G   A  AA A                   +T  VRT A          G+   P    +SF  + L+A+R+   ++  T  RPP   C G HEWAM+Y   +  HP        +PLR+P   +   V+  P+ C+HFDAFRFFTP ARPLN      S          EQPGCLH NMDL++WA KL PY P DLL +T  LA   R VDMRASPYDL               +  G    +SPI +ET EGRR Y+A QQ     A PLRARLI AYD    A +
Sbjct:   14 AVWQAQQRAHEARLRPVLDPYLARRSRGQADPVMDFLFEYYAFRPAQLLRWSPGL--------------GVALAGPAAEA----------------FLDQTGFVRTPA----------GVTLDP----SSFPRRRLDAVRWTRRLLAGTAARPPFLGCSGLHEWAMVYRTTAVRHP-------QVPLRLPPDAIAAVVDAGPVVCSHFDAFRFFTPAARPLNRHQPTRS-----AMPDFEQPGCLHTNMDLYRWAFKLAPYVPGDLLADTFLLACRIREVDMRASPYDL---------------RDRG----LSPIPVETPEGRRHYRACQQRFAAEAAPLRARLIAAYDRLIAALD 295          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: WP_069961268.1 (3-methyladenine DNA glycosylase [Lacunisphaera limnophila] >AOS43963.1 hypothetical protein Verru16b_01023 [Lacunisphaera limnophila])

HSP 1 Score: 191.4 bits (485), Expect = 7.000e-45
Identity = 132/352 (37.50%), Postives = 170/352 (48.30%), Query Frame = 0
Query:  151 MTCLPRAAWEAKAREHKSRMLALMG-GSTRHDHG--NPIFNFLFEYYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLI 500
            +T L    W A+   H++R+ A       R   G  +P+ +FLFEYY F+   L  +  G + V+L          G+ A+E        E +G   L                                   VA+F  K  ++L + L ++RAT  RPP+F C G HEWAM+Y        P     +A PLR P   L R VE +P+RC+HFDAFRFFTP ARPLN    + S    L     EQ GCLHANMDL+KWA KL P+ P++L  +  +LA   R VDMRASPYDL  L               GY     PI IET EGR  Y+  Q+   +R+QPLRARLI
Sbjct:   10 LTLLAEPDWRARQSAHEARVRAWTDPHQARQARGEKHPVEDFLFEYYRFRPSWLRRWHPGPDVVLL----------GESAREFLRWPEYHESDGGIAL----------------------------------NVAAFEAKRRDSLVWLLGLLRATAERPPMFACFGLHEWAMVYR-----QTPDEVRHNAWPLRFPPDELARIVEAQPVRCSHFDAFRFFTPPARPLNRLQPERSTVTQL-----EQRGCLHANMDLYKWAFKLAPFTPAELTADCFALARDIREVDMRASPYDLARL---------------GY----PPIGIETPEGRATYETHQRAFADRSQPLRARLI 288          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: OUV14699.1 (hypothetical protein CBC46_05755 [Verrucomicrobiaceae bacterium TMED86])

HSP 1 Score: 188.7 bits (478), Expect = 4.600e-44
Identity = 126/351 (35.90%), Postives = 168/351 (47.86%), Query Frame = 0
Query:  154 LPRAAWEAKAREHK---SRMLALMGGSTRHDHGNPIFNFLFEYYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKA 502
            L  + W+  A  H+    ++   M         +P+++FL  YY F    L  +  G+  V+     E+DP      K   S    R E GV  +  S L                                  TDK  E L + L +++ T +RPP   CHG HEWAM+Y      H      +++ PLR+ Q+ ++  V  RP+ C+HFDAFRFFTP A PLN     L       +  HEQPGC+H NMDL+KWA K  P+  SDLL ETL  A+  R VDMRASPYDLT                  Y +P  PI IET+EGRR+Y+AEQ  L+++  PLR +LI A
Sbjct:   11 LETSEWKHLASSHRVEVEKITIPMRRRRSRREKHPVYDFLNTYYSFSLGRLEGWHPGVGVVL-----EDDP------KHEFSPKYYRRENGVVSIDTSRL----------------------------------TDKGRERLEWILQLLKLTQSRPPNLACHGLHEWAMVYEGGDIRH------RESAPLRLSQKEIDALVASRPICCSHFDAFRFFTPTAIPLNKLSPSLH-----SREEHEQPGCIHTNMDLYKWAYKSSPWISSDLLRETLFFAIEAREVDMRASPYDLT-----------------DYGYP--PIPIETQEGRRQYEAEQLALYQKGLPLREKLIAA 286          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: CEL95644.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 185.7 bits (470), Expect = 3.900e-43
Identity = 123/324 (37.96%), Postives = 162/324 (50.00%), Query Frame = 0
Query:  180 HDHGNPIFNFLFEYYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAYD 504
            HD  +PIFNF+ EYY F    L  +S G   + L     +DP+  + A                     F+A         AE GG  +          PG+    +K L   ++   ++R T  R P F C G HEWAMLY P +    P  ++Q  L LR+ QQ LN  VE   + CTH+DA R F   A PLN      S+ R L     EQPGC+H NMDLFKWAVK  P+ PSD++ E LS+A+  RV+DMRASPYDLT          +   Q+    F  SP+++ET  GR +YQ  Q  +  RA+PLR RL+  Y+
Sbjct:   14 HDPAHPIFNFILEYYGFNHADLHRYSPG-SCIFLQGALADDPRLHRKA---------------------FVA---------AEGGGFFD----------PGL--IPEKRLAWFKWIAELLRVTMDREPSFKCFGLHEWAMLYRPAADEDAPVSRFQQ-LRLRLSQQELNMVVEAGLLSCTHYDASRHFPHSALPLNAIQPPPSKSRRLNL---EQPGCVHTNMDLFKWAVKAVPFIPSDIVREALSIAIEARVLDMRASPYDLT----------KVSLQRGSADFDASPVRVETAGGREDYQLMQWAIHRRAKPLRERLLHHYE 280          
BLAST of NO23G00170 vs. NCBI_GenBank
Match: WP_066217943.1 (3-methyladenine DNA glycosylase [Balneola sp. EhC07] >OAN63595.1 3-methyladenine DNA glycosylase [Balneola sp. EhC07])

HSP 1 Score: 185.3 bits (469), Expect = 5.000e-43
Identity = 120/352 (34.09%), Postives = 175/352 (49.72%), Query Frame = 0
Query:  154 LPRAAWEAKAREHKSRMLALMGG--STRHDH-GNPIFNFLFEYYHFKSQALLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFLASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMRATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRFVEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHANMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISGAELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIKAY 503
            LP   W+++  +H+S++  L+G     R  H  NP+ +FLF+YY F+   L  +S G    +   D E  P              + EE  + +                              W+ +     F ++ + +  + L ++++T    P F C G HEWAM+Y      H       D +PLR+    L  FVE RP+ CTHFDAFRFFT  A+P+N F  +LS+      +  EQPGC+H+NMDL+KWA KL P+  SDL+ E   LA+  R +DM+ASPYDL               +  G    + PIKIETEEGR+EY+A Q+ +FE+ +P+R +LI  Y
Sbjct:   14 LPEEEWKSRQTDHESKVDNLVGQYLIERSQHKKNPVMDFLFQYYAFRPSMLKRWSPGFGTALEFSDVETLP--------------DFEELNISD---------------------------NKAWIDMD---LFPERRIRSATWILEMLKSTQNSRPSFGCFGMHEWAMVYKAEKPRH-------DQVPLRMEPDELAEFVESRPLLCTHFDAFRFFTKPAQPMNRF--ELSRDTF---SETEQPGCIHSNMDLYKWAFKLYPWVSSDLILEAFELALEARTIDMQASPYDL---------------RDHG----LEPIKIETEEGRKEYKALQEAIFEKGKPVRDKLITDY 290          
The following BLAST results are available for this feature:
BLAST of NO23G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852517.11.400e-10964.38hypothetical protein NGA_0683000, partial [Nannoch... [more]
EWM28937.11.500e-7170.83hypothetical protein Naga_100511g2 [Nannochloropsi... [more]
CBN78709.11.000e-5637.13conserved unknown protein [Ectocarpus siliculosus][more]
KOO23409.11.300e-5439.94conserved unknown protein [Chrysochromulina sp. CC... [more]
XP_005852412.12.300e-4859.54hypothetical protein NGA_0700800, partial [Nannoch... [more]
WP_068124269.17.500e-4737.253-methyladenine DNA glycosylase [Rhodothermaceae b... [more]
WP_069961268.17.000e-4537.503-methyladenine DNA glycosylase [Lacunisphaera lim... [more]
OUV14699.14.600e-4435.90hypothetical protein CBC46_05755 [Verrucomicrobiac... [more]
CEL95644.13.900e-4337.96unnamed protein product [Vitrella brassicaformis C... [more]
WP_066217943.15.000e-4334.093-methyladenine DNA glycosylase [Balneola sp. EhC0... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR095ncniR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00170.1NO23G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|406969gene_10827Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|673280gene_8354Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00170.1NO23G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00170 ID=NO23G00170|Name=NO23G00170|organism=Nannochloropsis oceanica|type=gene|length=2202bp
AAACCACAGGATAAGAGACATGAACCCTTGGTCGAAGCCGCACGAAAAAG
AGAAGGGGTTCTCAAGGATCTGAGGCGGGGAAGGATGCAACAAACTTGTC
GTTCTGCTGCTGCTGCCGCTCCTAGTATCCCAACCAGTGCACTTCTCCCT
CCCCTCCCTTTGCTGCACCTCATCCTCCTCGTCCTTCTCCTCATCCCAGT
GCGACCTCTAGCAATGCCAGTCACCTTCAACAGACTATCTACGCTGGCTA
CCGCTGCACGGGTCCGGACAATTGCTGCCCACTCATCCCATTCCTTGGCT
TTTGCCACCAGAGCTTCTCCCTCCTCTCTTCCCTCGTCCTCCTGCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTTCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTTGCCAACCCT
CCCTCGTCGCCTTCCTATTGTCTTCCCCGACTCACACTTGATACCAGGAC
AACACAGCGTCTCTGGGGCATAAATCCCGAGGAGATGACTTGCTTGCCGC
GGGCCGCATGGGAGGCCAAGGCCCGAGAGCACAAGTCAAGGATGCTGGCT
CTGATGGGAGGGAGCACCAGGCATGACCACGGCAACCCGgtaatgagata
gtagggagttgtggaggagggagggaggaacagaatggaacgtttccttg
cactgatgtcgataccgccatttactgtaagcgtacactcatacatctcc
ctcttgtttccctatcgtcctcactactggttggtacagATATTCAACTT
CTTATTTGAGgtaaaggcagcaaatacacagaatggatggagagggcgaa
ggaatgaagagctatgtagagtggtgcatgccaaatactcacaaatgatt
ctcactctgacatccctctctctccctgcctccctccctccctcccttcc
ttcctccctccctccctccctcctgtagTACTACCACTTTAAGTCTCAAG
CCCTACTGGACTTTTCGGTGGGAATTGAGCCTGTAATCCTCTCGCTGGAT
GAGGAAAATGACCCAAAGGGAGGGAAATTCGCGAAAGAAGCAGCTTCTGC
TGCAGCAGAAAGAGAAGAGGAAGGGGTAGACGAGCTCTTGCCAAGCTTCC
TAGCGAGCAAGACCGTAATGGTTCGGACGTGTGCAGAGGAGGGAGGGAGG
GAGGAAGGAACTCGAGGACTGGTATGGCTGCCGTTACCGGGGGTGGCGTC
ATTTACCGACAAGCATTTAGAGGCTTTGCGCTTCGGCTTGTGTGTGATGC
GCGCGACGACCACACGGCCGCCCATCTTCTTTTGTCATGGCGCGCACGAG
gtaagggcatccatccacgggtttgctccaaggcaggagattcagaggga
gatgttcaaatgacttgtcagcgtttgtccttgttttgctcgcctgtctc
tgtatccgagtggacgtgagattgaaattgacggtttttcaaatatcggg
gtctcacgtcccttccccaccctcctccctcttccttccctccgcaaccc
acagTGGGCGATGCTCTATCACCCGCCCTCTTCTACCCACCCACCGCCCC
ATAAATACCAAGATGCCTTGCCTTTGCGCATACCCCAACAAGTCTTGAAT
CGCTTCGTGGAAGAGCGCCCGATGCGCTGCACGCATTTTGACGCGTTTCG
GTTTTTCACCCCTGACGCCCGTCCCCTGAATATCTTTCACGACGACTTGA
GTCAGGGTCGACTGCTTGGGCAAGCGTTACATGAACAGCCGGGATGTTTA
CACGCAAATATGGATTTGTTCAAATGGGCAGTTAAATTGGGCCCGTATGC
GCCCAGCGACCTGCTGGAGGAAACCTTGTCATTGGCGGTGGCGTGTCGGG
TGGTGGATATGCGGGCGTCTCCTTATGATCTAACTGTGCTCCGAGAAATA
AGCGGTGCTGAACTACAGCAGCAGCAGCAGCAGGAGGGATATGCATTCCC
AGTATCGCCTATTAAGATCGAAACGGAAGAGGGACGGAGGGAGTACCAGG
CGGAGCAGCAGGTGCTGTTTGAGAGAGCGCAGCCATTGCGAGCGCGTCTG
ATAAAGGCTTATGACTTATTTTTCAGGGCCTACGAGGCAGGGAGGGAGGA
AGGAAAAGACGAAATCGCCGAGAAAAAAAGAGGCATTATAGGACATGAAT
GA
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protein sequence of NO23G00170.1

>NO23G00170.1-protein ID=NO23G00170.1-protein|Name=NO23G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MQQTCRSAAAAAPSIPTSALLPPLPLLHLILLVLLLIPVRPLAMPVTFNR
LSTLATAARVRTIAAHSSHSLAFATRASPSSLPSSSCSSSSSSSSSSSSS
SSFSSSSSSSSSSSSSSSLANPPSSPSYCLPRLTLDTRTTQRLWGINPEE
MTCLPRAAWEAKAREHKSRMLALMGGSTRHDHGNPIFNFLFEYYHFKSQA
LLDFSVGIEPVILSLDEENDPKGGKFAKEAASAAAEREEEGVDELLPSFL
ASKTVMVRTCAEEGGREEGTRGLVWLPLPGVASFTDKHLEALRFGLCVMR
ATTTRPPIFFCHGAHEWAMLYHPPSSTHPPPHKYQDALPLRIPQQVLNRF
VEERPMRCTHFDAFRFFTPDARPLNIFHDDLSQGRLLGQALHEQPGCLHA
NMDLFKWAVKLGPYAPSDLLEETLSLAVACRVVDMRASPYDLTVLREISG
AELQQQQQQEGYAFPVSPIKIETEEGRREYQAEQQVLFERAQPLRARLIK
AYDLFFRAYEAGREEGKDEIAEKKRGIIGHE*
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Synonyms
Publications