NO23G00130, NO23G00130 (gene) Nannochloropsis oceanica

Overview
NameNO23G00130
Unique NameNO23G00130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3935
Alignment locationchr23:66013..69947 +

Link to JBrowse

Properties
Property NameValue
Description1,4-beta-D-glucan cellobiohydrolase C
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:66013..69947 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030245cellulose catabolic process
GO:0030245cellulose catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR036434Beta_cellobiohydrolase_sf
IPR016288Beta_cellobiohydrolase
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO23G00130 vs. NCBI_GenBank
Match: OLP91954.1 (Exoglucanase 3 [Symbiodinium microadriaticum])

HSP 1 Score: 489.6 bits (1259), Expect = 1.100e-134
Identity = 240/444 (54.05%), Postives = 306/444 (68.92%), Query Frame = 0
Query:   19 LLSSFTSVQAAIKTQNMRGMAVTSTG--KPRGTNIFKGADMYVNPYFQEELDSSIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDYQAEGD--CKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMDYLAILEKINVAKHVRGFALNTANYQPVGEMCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSP-LVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANA 458
            L  S T+ +A   T    G   TS+G  KP G N F+    YVNP +Q  L SSI TA G +K+TL+++  L SAYWLD + K+H     G    SMEGILEDAASK  P    FIVYDLPNRDCHA ASNGE+CC+Y  DGRCDY A GD  CK+G++ YK++YID I  VL++F G+VP+ LVIEPDSLPNL+TN  DPRCG+ AT +AY +GV+YAV+ +    P   +YLD+ HGGWLGW+ ++ DY+ ++ ++ V+ H+RGFA N A YQ VGE+C  +D+CL   + + +CC DPC L  ++N  +NE+ +AL +    +     FEP  +IDTGRNG +GMR  C+NWCNIRGAG+G   TT+T  P +VDA+ WLKTPGESDGC+Q L  PD + CPRFD  C S DSI     +PRAPEAG WFDYQIK+LAANA
Sbjct:  490 LYDSDTTTEAPETT----GGESTSSGPEKPDG-NPFEDKVFYVNPSYQASLTSSIETAEGPIKETLEAMMDLPSAYWLDKRDKIH-----GTSTNSMEGILEDAASKPVPELVVFIVYDLPNRDCHAKASNGELCCSYKDDGRCDYLAVGDGSCKDGLKQYKEEYIDQIASVLREFSGRVPVVLVIEPDSLPNLSTNQHDPRCGNAATKSAYTRGVSYAVKALAEADPHAAIYLDAGHGGWLGWKDNMKDYVQMIRRLRVSDHIRGFASNVAGYQYVGEVCEEYDWCLNNAHPDDSCCQDPCGLTSEWNPSHNELQYALHLRKAMSEGIRGFEPHMIIDTGRNGVAGMRTDCANWCNIRGAGVGLAATTNTAKPSVVDAYFWLKTPGESDGCSQTL--PDGSTCPRFDEDCASIDSISFRPEEPRAPEAGQWFDYQIKQLAANA 921          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: OLP73243.1 (Exoglucanase 3, partial [Symbiodinium microadriaticum])

HSP 1 Score: 399.4 bits (1025), Expect = 1.500e-107
Identity = 202/419 (48.21%), Postives = 261/419 (62.29%), Query Frame = 0
Query:   67 LDSSIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPD---GRCDYQAEG------------DCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPR------CGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMD----YLAILEKINVAKHVRGFALNTANYQPVGE-MCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSPLVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANANL 460
            L +SI   SG V+ TL+S++ + SA+W+DVKSK+++  G   D  ++EGILEDAAS +PP     IVYDLPNRDC A ASNGEICC Y  D    +CD    G            +C +G+  YK  YIDP  +V+ +F  +VP+ LVIEPDSLPNL TN+ D R      C  +  V AYE+G+ YAVE++        +Y+D+ HGGWLGW +S  D    +  I+  + +A  VRGFA N ANYQP+G  +C     C G  + +  C  DPC L + +N  +NE+N+  ++  K     P F P F+IDTGRNG+   R  C NWCN RGAGIG  PTT T    +DA+ WLKTPGESDGCT++L  PD T CPRFD MC S DS+GS   +PRAPEAGLW+ YQI  LA NA++
Sbjct:   46 LSTSINLTSGGVRATLESMQNVPSAFWIDVKSKIYKGQG-HPDHSTVEGILEDAASCSPPSLVVLIVYDLPNRDCFALASNGEICCHYGEDKGRTKCDMSTSGPNAGFYREVAGANCADGLAEYKSTYIDPFAEVVGRFADRVPVVLVIEPDSLPNLVTNMKDKRPDNFRGCHDETKV-AYEEGIRYAVEKLS--VTGAQLYVDAGHGGWLGWANSNDDQTGKFANIIANMQIADKVRGFATNVANYQPLGSVVCSEPGKCKGQMSSDPCCADDPCNLQKDWNWAHNELNYVDVLDYKMRAAIPGFTPSFIIDTGRNGKPNTRSDCGNWCNARGAGIGRVPTTATPDARIDAYFWLKTPGESDGCTEVL--PDGTNCPRFDEMCASVDSLGSRNGEPRAPEAGLWYHYQIAMLAENADM 458          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: OLP95804.1 (Endoglucanase [Symbiodinium microadriaticum])

HSP 1 Score: 399.4 bits (1025), Expect = 1.500e-107
Identity = 202/419 (48.21%), Postives = 261/419 (62.29%), Query Frame = 0
Query:   67 LDSSIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPD---GRCDYQAEG------------DCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPR------CGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMD----YLAILEKINVAKHVRGFALNTANYQPVGE-MCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSPLVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANANL 460
            L +SI   SG V+ TL+S++ + SA+W+DVKSK+++  G   D  ++EGILEDAAS +PP     IVYDLPNRDC A ASNGEICC Y  D    +CD    G            +C +G+  YK  YIDP  +V+ +F  +VP+ LVIEPDSLPNL TN+ D R      C  +  V AYE+G+ YAVE++        +Y+D+ HGGWLGW +S  D    +  I+  + +A  VRGFA N ANYQP+G  +C     C G  + +  C  DPC L + +N  +NE+N+  ++  K     P F P F+IDTGRNG+   R  C NWCN RGAGIG  PTT T    +DA+ WLKTPGESDGCT++L  PD T CPRFD MC S DS+GS   +PRAPEAGLW+ YQI  LA NA++
Sbjct: 1625 LSTSINLTSGGVRATLESMQNVPSAFWIDVKSKIYKGQG-HPDHSTVEGILEDAASCSPPSLVVLIVYDLPNRDCFALASNGEICCHYGEDKGRTKCDMSTSGPNAGFYREVAGANCADGLAEYKSTYIDPFAEVVGRFADRVPVVLVIEPDSLPNLVTNMKDKRPDNFRGCHDETKV-AYEEGIRYAVEKLS--VTGAQLYVDAGHGGWLGWANSNDDQTGKFANIIANMQIADKVRGFATNVANYQPLGSVVCSEPGKCKGQMSSDPCCADDPCNLQKDWNWAHNELNYVDVLDYKMRAAIPGFTPSFIIDTGRNGKPNTRSDCGNWCNARGAGIGRVPTTATPDARIDAYFWLKTPGESDGCTEVL--PDGTNCPRFDEMCASVDSLGSRNGEPRAPEAGLWYHYQIAMLAENADM 2037          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: KOO25881.1 (glycoside hydrolase family 6 protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 375.6 bits (963), Expect = 2.300e-100
Identity = 178/419 (42.48%), Postives = 253/419 (60.38%), Query Frame = 0
Query:   48 GTNIFKGADMYVNPYFQEELDSSIATASGEVK-KTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDYQAEGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMDYLAILEKINVAKHVRGFALNTANYQPVGEMCP-------FWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSP-LVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANA 458
            G N+F     YV+PYFQ+ +D + A  +       L  +R  S+A+W+  KS ++          + E IL+ AAS++PPP   F+VY+LPNRDC A  S GE CC   PDG CDY AEGDC  G+  YK  ++DPI  V+ K+  KVP+A V+EP S+PNLATN G+P+C + AT  +Y +G+  AV+ +   AP   +Y+D++HGGWLGWE +   Y  +   + V   VRG A N  N+QP+G  CP         +YC    +    CC DPC L  Q+++GNNE N+   +  +     P ++P ++IDT RNG +  R SC++WCN+RGAG+G  P+++   P LVDA  +LKTPGESDGCT+ L  PD + C  +D  C  PD+IGS   +P+AP +G ++++    LA NA
Sbjct:   19 GINVFATNRFYVDPYFQKNVDDATAGVTDPATLANLGKMRQTSTAHWITKKSIIN----------TTEPILKGAASQSPPPLVVFVVYNLPNRDCDADNSLGEFCCATKPDGSCDYLAEGDCSTGLSQYKNDFLDPIAAVVAKYADKVPMAFVLEPSSIPNLATNKGNPKCATSATEASYTKGIPMAVDALAAAAPKASIYIDAAHGGWLGWEANAQAYATLFSTLQVTAKVRGLATNMGNFQPLGVPCPASAFDDSMHNYC---GSTGGVCCEDPCALLPQFSSGNNEYNYIQALTKEIKRAIPYWDPHYIIDTSRNGITDERSSCASWCNVRGAGLGKTPSSNNLLPNLVDALFYLKTPGESDGCTETL--PDGSTCHEYDKTCGDPDAIGSQPGEPKAPVSGTFWNFYAVSLAKNA 422          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: XP_005713951.1 (exoglucanase 3 1,4-beta-cellobiohydrolase3 family GH6, Exoglucanase 3 (Pyrenophora tritici-repentis (strain Pt-1C-BFP)), Predicted CDS Pa_4_2420 (Podospora anserina) [Chondrus crispus] >CDF34132.1 exoglucanase 3 1,4-beta-cellobiohydrolase3 family GH6, Exoglucanase 3 (Pyrenophora tritici-repentis (strain Pt-1C-BFP)), Predicted CDS Pa_4_2420 (Podospora anserina) [Chondrus crispus])

HSP 1 Score: 373.6 bits (958), Expect = 8.700e-100
Identity = 172/411 (41.85%), Postives = 265/411 (64.48%), Query Frame = 0
Query:   49 TNIFKGADMYVNPYFQEELDSSIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDY-QAEGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMDYLAILEKINVAKHVRGFALNTANYQPVGEMCPFWDYCLGGKNVNATCC-ADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSPLV-DAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAAN 457
            TN +     +++P ++++++SSIA+AS   +  L  +    +A WL  K+ V R     +    +   L+ A+    PP  T IVY+LPNRDC A +S GE CC+   +G C++      C++G++ Y+ +YI P+++ +++++  VP++ V+EPDSLPNL TNL +P+CG+KAT ++Y  G+ +AV  +    P   +YLD++HGGWLGWE S + ++ +L+K+ + + +RGFA+N +NYQ +G +CP   +CL G N +  CC  D C L +++N G+  +N+A+ + +        +EP+F++DT RNG    RE CS WCN+R A +G   TT+T +  V DA+L++K PGESDGCT+ILP   K  CPRFDS+C S DS+GS   +PRAPEAG WFDY IK +A N
Sbjct:   39 TNPYTVRRAFIDPVYKKQVNSSIASASAGERAALTELLTTPTAVWLSTKADVQR-----NRKSRIAKALKQASRWKNPPMVTLIVYNLPNRDCAAESSAGEFCCSPNKNGTCNFLDGSTMCEDGLRRYQNEYIKPLLKFVREYRKIVPMSFVVEPDSLPNLVTNLENPKCGNKATNSSYMNGIKFAVNSLSEACPHCPLYLDAAHGGWLGWEDSSVGFVKLLKKLRIVRKLRGFAINVSNYQEMGVICPEVGFCLDGANPDHECCKIDSCGLLEKFNPGHTILNYAMSLKSYVESAIDGYEPKFIVDTSRNGAGDAREDCSVWCNVRSAALGEPFTTETANKTVFDAYLYIKPPGESDGCTEILPEGGK--CPRFDSVCASDDSVGSKRGEPRAPEAGDWFDYMIKGIATN 442          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: KOO25121.1 (glycoside hydrolase family 6 protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 302.0 bits (772), Expect = 3.200e-78
Identity = 168/411 (40.88%), Postives = 237/411 (57.66%), Query Frame = 0
Query:   82 LKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDYQAEGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQI--------------GTHAPDVMMYLDSSHGGWLGWEHSLMDYLAILEKINVAKHVRGFALNTANYQPVGE--MCPFWDYCLGG---------------KNVNATCCA-DPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSP-LVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANANL 460
            L+ ++ + SA+W+D   K+  +    +   ++EGIL+DAASK+ PP   FI YDLPNRDC+A ASNGEI       G  D     +    +  Y+ +Y+DP V VL ++  +VP+ +VIEPDSL N+ +N G   C + ATV  Y+ GV YAV+ +               +    + +Y+D++HGGW+G+E +   +++++ +I +   +RGF  N ANYQP+GE  +CP   Y   G               K+V+  CC  DPC++    + G+ E+++   +      M   ++P FVIDTGRNG+   R SC +WCNI GAG GH PT +TG P +VDAF WLKTPGESDGCT++LP      C RFDS C   DSI +    P APEAG WF YQ   LA NA+L
Sbjct:    2 LEQMKTIPSAFWIDNYGKIRGS----NRLDTLEGILQDAASKSDPPLCVFIFYDLPNRDCNAKASNGEISF-----GEQDVAEASEA--ALAIYRTRYVDPFVAVLGEYP-RVPVVIVIEPDSLGNVISNAGQHSC-TAATVATYKLGVRYAVDALSGARGHLAAGGTVGASMGAPIALYVDAAHGGWMGFEPNAQAFVSLMIEIGILDKIRGFTTNVANYQPLGEGALCPAEAYERAGEMLHGAVLGVADWCKKHVDHACCTEDPCEVLGLGSGGSTELSYVQSLQQHFV-MRTGWQPHFVIDTGRNGRPHARSSCRSWCNINGAGAGHVPTMNTGLPSVVDAFYWLKTPGESDGCTRLLPSGQ--SCARFDSDCEGRDSITT----PAAPEAGRWFHYQATMLARNADL 392          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: XP_009034246.1 (hypothetical protein AURANDRAFT_62046 [Aureococcus anophagefferens] >EGB10646.1 hypothetical protein AURANDRAFT_62046 [Aureococcus anophagefferens])

HSP 1 Score: 285.4 bits (729), Expect = 3.100e-73
Identity = 138/287 (48.08%), Postives = 172/287 (59.93%), Query Frame = 0
Query:   58 YVNPYFQEELDSSIATA-SGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDYQAEGDCKEG---------------IQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMDYLAILEKINVAKHVRGFALNTANYQPVGEMCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNE 329
            YVNP     LD+SIAT     V  TL++++G++SAYW+DVK K+   D  G       GIL DAA+   PP   FIVYDLPNRDCHA+ASNGEICC Y  DG CDY   GDC  G               +  YK  Y+DP   +L +F+G VP+AL++EPDSLPN ATNL DPRCG+  T NAYE G+AYAVE +   AP   +YLD+ HGGWLGWE +L  + + +  +            TANYQP+GE C     C+ G   ++ CC DPC L  QYN G N+
Sbjct:  211 YVNPTLAANLDASIATTDDAAVAATLEAMKGVASAYWIDVKGKL---DPNGTSTADARGILLDAAAHAEPPLVVFIVYDLPNRDCHAYASNGEICCAYNDDGTCDYDNSGDCAAGLDQGGKQTYSTRLQCLDEYKTTYVDPFAAILAEFEGVVPVALILEPDSLPNFATNLDDPRCGNIGTKNAYELGIAYAVEALKAAAPSAHIYLDAGHGGWLGWEDNLESFASTVASLXXXXXXXXXXXXTANYQPLGEPCADGVDCITGPGASSACCDDPCGLLSQYNRGQNQ 494          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: EJY73621.1 (Exocellobiohydrolase (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 235.0 bits (598), Expect = 4.800e-58
Identity = 169/481 (35.14%), Postives = 239/481 (49.69%), Query Frame = 0
Query:   39 AVTSTGKPRGTNIFKGADMYVNPYFQEELDSSIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAA--SKNPPPATT--FIVYDLPNRDCHAHASNGEICCTYLP----DGRCDYQA--EGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGD-PRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGW------------------------------EHSLMDYLAILEKI------NVAKHVRGFALNTANYQPVGEMCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNF-----ALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRES---CSNWCNIRGAGIGHRPTTDT-------GSPLVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANA 458
            A+ ST  P   N     +M+VNP+FQ+E+++S  T +   K+ LK    + +AYW+D +S +           S+  +L++A+  +K      T  FI Y+LPNRDC A ASNGEICC+  P     G CD  +   GDC +G+  Y   Y D + QV+ K+  ++ I  +IEPDSLPNLATNLG  P C ++ T  +Y  GV YA++++ +   ++ +Y+D  HGGWLGW                              + +   +++ ++ I      +    +RGFA NTANYQP+G                     D C L  Q+N   NE+ +     AL   N  +  W       + DTGRNG   MR S   C NWCN++G G+G RPT+          S  +DA +W KTPGESDGC+   PG  + QC R D MC   D     +  P APEAG W D  IK L+ +A
Sbjct:   29 ALYSTRNPFDENTH---EMFVNPWFQKEVEAS-KTLTDTQKQRLKD---MPAAYWVDTQSAIQTRTP------SLNSLLQEASHYAKQTSKKVTVMFIHYNLPNRDCSASASNGEICCSGNPPNPNTGSCDDSSYTSGDCSKGLNKY-HSYTDEVYQVVSKYP-ELEIVALIEPDSLPNLATNLGKLPHC-TETTKQSYVNGVGYAIKKL-SQISNLQLYIDVGHGGWLGWCGNHPCKESSECGSNNKCMRGYCECPADRLDQNSQTFVSTIKDIFNLAGQDAVLKIRGFATNTANYQPLGYPDD----------------TDHCMLGSQWNFAYNELRYIDQMDALFKKNGISKNW-------ITDTGRNGVPEMRSSAQQCQNWCNVKG-GLGLRPTSQVQELQKLLQSASLDAVVWSKTPGESDGCS---PGSGQ-QCTRVDQMCQR-DCQSEFQKCP-APEAGQWDDDMIKYLSDHA 462          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: XP_023093131.1 (unnamed protein product [Aspergillus oryzae RIB40] >BAE64227.1 unnamed protein product [Aspergillus oryzae RIB40])

HSP 1 Score: 234.6 bits (597), Expect = 6.300e-58
Identity = 154/418 (36.84%), Postives = 217/418 (51.91%), Query Frame = 0
Query:   48 GTNIFKGADMYVNPYFQEELDS-SIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDYQAEGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMD----YLAILEKINVAKHVRGFALNTANYQPVG-EMCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRES-CSNWCNIRGAGIGHRPTTDTGSPLVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANAN 459
            G N F+G D+YVNPY++ E++S +I + +G + +   +   + S +WLD   KV     P    F  +   ++AA  NPP A  F+VYDLP+RDC A ASNGE     + DG            G++ Y K YID I + ++K+     I LVIEPDSL NL TNL   +C +    +AY +   YA+ Q+  + P+V MYLD+ H GWLGW  ++      Y ++ +  +    VRG A N ANY     + CP   Y  G     +T C +   +           NFA  +  K+ G    F+  F++DTGRNG     +S   +WCN++  G G RPTTDTG  LVDAF+W+K  GESDG +        T   R+D+ C   D++        APEAG WF    ++L  NAN
Sbjct:  136 GGNPFEGYDLYVNPYYKSEVESLAIPSMTGSLAEKASAAANVPSFHWLDTTDKV-----PQMGEFLEDIKTKNAAGANPPTAGIFVVYDLPDRDCAALASNGEF---LISDG------------GVEKY-KAYIDSIREQVEKY-SDTQIILVIEPDSLANLVTNLNVQKCAN--AQDAYLECTNYALTQL--NLPNVAMYLDAGHAGWLGWPANIGPAAELYASVYKNASSPAAVRGLATNVANYNAFSIDSCP--SYTQG-----STVCDEKTYI----------NNFAPQL--KSAG----FDAHFIVDTGRNGNQPTGQSQWGDWCNVKNTGFGVRPTTDTGDELVDAFVWVKPGGESDGTSD-------TSAERYDAHCGYADAL------TPAPEAGTWFQAYFEQLVENAN 491          
BLAST of NO23G00130 vs. NCBI_GenBank
Match: XP_002380541.1 (cellobiohydrolase, putative [Aspergillus flavus NRRL3357] >EED50160.1 cellobiohydrolase, putative [Aspergillus flavus NRRL3357] >BAI65845.1 cellobiohydrolase II [Aspergillus oryzae] >BAI65846.1 cellobiohydrolase II [Aspergillus oryzae] >KOC17742.1 putative cellobiohydrolase [Aspergillus flavus AF70])

HSP 1 Score: 234.6 bits (597), Expect = 6.300e-58
Identity = 154/418 (36.84%), Postives = 217/418 (51.91%), Query Frame = 0
Query:   48 GTNIFKGADMYVNPYFQEELDS-SIATASGEVKKTLKSIRGLSSAYWLDVKSKVHRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEICCTYLPDGRCDYQAEGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVIEPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDSSHGGWLGWEHSLMD----YLAILEKINVAKHVRGFALNTANYQPVG-EMCPFWDYCLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRFVIDTGRNGQSGMRES-CSNWCNIRGAGIGHRPTTDTGSPLVDAFLWLKTPGESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQIKELAANAN 459
            G N F+G D+YVNPY++ E++S +I + +G + +   +   + S +WLD   KV     P    F  +   ++AA  NPP A  F+VYDLP+RDC A ASNGE     + DG            G++ Y K YID I + ++K+     I LVIEPDSL NL TNL   +C +    +AY +   YA+ Q+  + P+V MYLD+ H GWLGW  ++      Y ++ +  +    VRG A N ANY     + CP   Y  G     +T C +   +           NFA  +  K+ G    F+  F++DTGRNG     +S   +WCN++  G G RPTTDTG  LVDAF+W+K  GESDG +        T   R+D+ C   D++        APEAG WF    ++L  NAN
Sbjct:   49 GGNPFEGYDLYVNPYYKSEVESLAIPSMTGSLAEKASAAANVPSFHWLDTTDKV-----PQMGEFLEDIKTKNAAGANPPTAGIFVVYDLPDRDCAALASNGEF---LISDG------------GVEKY-KAYIDSIREQVEKY-SDTQIILVIEPDSLANLVTNLNVQKCAN--AQDAYLECTNYALTQL--NLPNVAMYLDAGHAGWLGWPANIGPAAELYASVYKNASSPAAVRGLATNVANYNAFSIDSCP--SYTQG-----STVCDEKTYI----------NNFAPQL--KSAG----FDAHFIVDTGRNGNQPTGQSQWGDWCNVKNTGFGVRPTTDTGDELVDAFVWVKPGGESDGTSD-------TSAERYDAHCGYADAL------TPAPEAGTWFQAYFEQLVENAN 404          
The following BLAST results are available for this feature:
BLAST of NO23G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OLP91954.11.100e-13454.05Exoglucanase 3 [Symbiodinium microadriaticum][more]
OLP73243.11.500e-10748.21Exoglucanase 3, partial [Symbiodinium microadriati... [more]
OLP95804.11.500e-10748.21Endoglucanase [Symbiodinium microadriaticum][more]
KOO25881.12.300e-10042.48glycoside hydrolase family 6 protein [Chrysochromu... [more]
XP_005713951.18.700e-10041.85exoglucanase 3 1,4-beta-cellobiohydrolase3 family ... [more]
KOO25121.13.200e-7840.88glycoside hydrolase family 6 protein [Chrysochromu... [more]
XP_009034246.13.100e-7348.08hypothetical protein AURANDRAFT_62046 [Aureococcus... [more]
EJY73621.14.800e-5835.14Exocellobiohydrolase (macronuclear) [Oxytricha tri... [more]
XP_023093131.16.300e-5836.84unnamed protein product [Aspergillus oryzae RIB40]... [more]
XP_002380541.16.300e-5836.84cellobiohydrolase, putative [Aspergillus flavus NR... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL037nonsL037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR095ncniR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008467NSK008467Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00130.1NO23G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675073gene_10833Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|601691gene_8350Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100493g1gene7434Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00130.1NO23G00130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00130 ID=NO23G00130|Name=NO23G00130|organism=Nannochloropsis oceanica|type=gene|length=3935bp
ATGCCTCGTCTTTTTCACCCTGCTGCCGCCACGGCCGCTGTGCTCGCCTC
CATGCTCCTCTCCTCCTTCACTTCCGTCCAGGCAGCAATCAAGACGCAGA
ACATGCGTGGCATGGCTGTCACCAGCACGGGCAAGCCTAGGGGCACCAAC
ATTTTTAAGGgtaaggaaggagggaaagagggaggatatggaacaggggc
aagcaggggagtgttgccctgtgtacgtgtcgagagggacccataagatg
taataagaatatccatgagagcgatagttgcagcagtcttgtgaggaaaa
ggtgagggtggtggtggtgcgctggcgggagtcacatactgaacaactca
aacagccacagggagtgtctccgtcttcccctttccctttcattttccgt
cttccccgccctcctactctccctcccttcctcttcctcgatccaccaga
atgtgtaatcgcactcattcccctctcttcctccctccctgcctccctag
GCGCGGACATGTACGTCAACCCCTACTTCCAAGAGGAGCTCGACTCCTCC
ATTGCCACGGCCTCGGGGGAAGTCAAGgtagggagggagggagggaggga
gggagggagggacagtttccctcttcaagttttacccttctggacgcacg
tcacttacttcccttccctccctccctccctccctccaacagAAAACCCT
GAAGTCGATCCGCGGCCTCTCTTCCGCGTATTGGTTGGACGTCAAAAGCA
AGgtacggaagggagggagggaatgggagaaatggatattttgccccctc
gatacaatcatttgatgtagattgattgtacccgtactcattccctccct
ccctccctcccttcctccctcccctcccctcctctctcagGTCCACCGCG
CCGACGGCCCGGGTGATGATTTTTTTTCTATGGAAGGCATTCTTGAGGAT
GCGGCTTCCAAGAACCCTCCCCCCGCCACTACTTTTATCGTCTACGACTT
GCCCAATCGgtacgtcgtgccctccctccctccctccctccctccccccc
tccctcctccccgttttccctatttggtgtgtcgtcctggatcccatctt
tccatctttgagcgactctctcactttgacacctcgctttaaacgccctt
aacgcctctaacgatggcatctgctgcatgtccctgcccgacgaccgctc
cctcaactcgcatatgtttccctccctccctccctcagCGACTGCCACGC
TCATGCCTCCAACGGCGAGATCTGCTGCACCTACCTCCCTGACGGCCGCT
GCGACTACCAGGCGGAGGGAGATTGCAAAGAGGGCATTCAGACGTACAAG
AAGCAGTACATTGATCCCATTGTCCAGgtacctccctccctcctccctcc
ctccctccctccctccatctttcccccccctctatgtgtgtgtgtcttat
tttttcccgccttccttattgtcccctcccttcccctaaccctcctcctc
tctcccttctctcccaccagcgtgtccgcctccggagcccgccctccact
ctgaaacccacatctcccacatacttccctccacccccctccccccctcc
ctccctccctcagGTCCTGAAGAAGTTCCAGGGGAAGGTTCCCATCGCCC
TCGTCATCGAGCCTGACTCTCTTCCCAATCTGGCCACTAACCTCGGAGAC
CCCCGCTGCGGCTCTAAGgtacaccctccctccctccctccctccgttcc
gtttccaagccctcccattccccacaatacaatcgcattcactttccttt
tctcttcttcctccctctctcgctctttccagGCTACCGTGAACGCCTAC
GAGCAAGGCGTGGCCTACGCCGTCGAACAGATCGGAACCCATgtaaggaa
ggagggagggagggagggtaagaagtaatgtgatcaccgtgtgtcggtac
tcacactcttcctgtcctttcctaactcatcccttccctccctccctccc
tctcctcctccccaagGCCCCGGACGTGATGATGTACCTCGACTCGTCCC
ACGGCGGCTGGCTGGGCTGGGAGCACTCGCTCATGGACTACCTGGCCATC
CTCGAGAAGATCAACGTCgtacgtccctccctccctccctcctcgcctgc
ctgacgtttacttgcttgccttccctccctccctccctccctccctccct
cccttgtcctgcatttccccccactacaactcgaatccacactccctccc
tccttccctccctccctccttccctccctccccccagGCCAAGCACGTCC
GCGGCTTTGCCCTCAACACGGCCAATTATCAGCCCGTCGGGGAAATGTGC
CCCTTCTGGGATTATTGCCTCGGGGGGAAGAACGTCAACGCCACgtacgg
ccctccctccctctttccctccctcctgtattcgactcatgtctaatcgc
ttcttcggcgggcgtagatttatatggtccctccctccctccctcccttc
cttcctccctccagaacctccttccttccctgccttttccgaaatcctcg
aggcatcattctgaccatctccctccctccctcctcccagGTGTTGCGCG
GACCCGTGCAAGCTTGCGCAGCAGTACAACGCAGGGAACAACGAGATGAA
CTTTGCCCTGATGATGCACAATAAGACCACCGGCATGTGGCCCTCCTTCG
AGCCGCGCTTCGTCATCGACACGGGCCGCAACGGGCAGgtagggagagag
ggagggagggagggagggagtaagcacaagcatctggacatgggccgctg
tatcacacatgggtattaccaccagaataagtgtcctccagaacgtacac
tcaaccaccttccctccctccctcccgccctccctagTCCGGCATGCGCG
AGTCTTGCTCCAACTGGTGCAACATCCGCGGGGCTGGTATTGGGCACCGC
CCCACCACCGACACAgtacgtttcctcccacccttccttctctccccctt
ccttctctccctccttctctccctccctctctccctctttccttccatcc
ctccttccctccctccctccttgcctcatcctgccttttttgacccggca
tttcccacgtagcttaatctcatcttcttattgtaatcattttgattagc
tgtaaaccttacttaaacctaattactttgacttatacaacacctatctt
ctcacgcagGGCTCGCCGTTGGTGGACGCCTTCCTGTGGCTCAAGACCCC
CGGGGAGTCGGACGGGTGCACGCAGgtacgtgagtagaaggaggaaggtt
ttgtgcgcaagagggtgcgtgaatgataatgaatgatagtgctgctttca
gagcactccctctctatgtatatatgtaatacgggccggcctctgtttgg
tcccgggcgtgtggatggatgggcgaatgtatgtgtcgtgtgtccgcggg
gttgttgcgcgggtgtctgtctctgtccctctctctaccgcgtgtgagtt
tttctatgtatgtacttgtaccaatatacatatgtacatatatccgttca
acgaggcgtaaagggacgctccccactcacattttcctcactccctccct
ccctccttcccgcttagATCTTGCCGGGCCCGGATAAGACGCAGTGCCCT
CGTTTTGACTCCATGTGCATGTCCCCCGACTCCATTGGCTCCCTTGAGAT
GGATCCGCGCGCGCCCGAGGCCGGCCTTTGGTTCGACTACCAGgtacgct
gctaaggagggagggagggatggaaggcggaagaagcgggtgcggaggat
taaatttggtcgtccacgattgaggatcaggtgatgttacgcgacagctg
acactctctctctcgctctctccctccctcggctcatccacaacagATCA
AGGAGCTGGCCGCCAATGCCAACCTGGACGGTTAA
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protein sequence of NO23G00130.1

>NO23G00130.1-protein ID=NO23G00130.1-protein|Name=NO23G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MPRLFHPAAATAAVLASMLLSSFTSVQAAIKTQNMRGMAVTSTGKPRGTN
IFKGADMYVNPYFQEELDSSIATASGEVKKTLKSIRGLSSAYWLDVKSKV
HRADGPGDDFFSMEGILEDAASKNPPPATTFIVYDLPNRDCHAHASNGEI
CCTYLPDGRCDYQAEGDCKEGIQTYKKQYIDPIVQVLKKFQGKVPIALVI
EPDSLPNLATNLGDPRCGSKATVNAYEQGVAYAVEQIGTHAPDVMMYLDS
SHGGWLGWEHSLMDYLAILEKINVAKHVRGFALNTANYQPVGEMCPFWDY
CLGGKNVNATCCADPCKLAQQYNAGNNEMNFALMMHNKTTGMWPSFEPRF
VIDTGRNGQSGMRESCSNWCNIRGAGIGHRPTTDTGSPLVDAFLWLKTPG
ESDGCTQILPGPDKTQCPRFDSMCMSPDSIGSLEMDPRAPEAGLWFDYQI
KELAANANLDG*
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Synonyms
Publications