NO23G00060, NO23G00060 (gene) Nannochloropsis oceanica

Overview
NameNO23G00060
Unique NameNO23G00060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4127
Alignment locationchr23:25205..29331 -

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Properties
Property NameValue
DescriptionUMP-CMP kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:25205..29331 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005516calmodulin binding
GO:0004683calmodulin-dependent protein kinase activity
GO:0005524ATP binding
GO:0019205nucleobase-containing compound kinase activity
GO:0005488binding
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
IPR027417P-loop_NTPase
IPR013543Ca/CaM-dep_prot_kinase-assoc
IPR000850Adenylat/UMP-CMP_kin
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
BLAST of NO23G00060 vs. NCBI_GenBank
Match: XP_008616160.1 (cytidylate kinase [Saprolegnia diclina VS20] >EQC30307.1 cytidylate kinase [Saprolegnia diclina VS20])

HSP 1 Score: 265.0 bits (676), Expect = 4.000e-67
Identity = 130/264 (49.24%), Postives = 184/264 (69.70%), Query Frame = 0
Query:  163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDVHVSTISQ 427
            R KV+FVLGGPGAGKGTQC ++V++YGFVHLSAG+LLR+ R SG+E G +ID  + +G IVPV+++L L+R  M      +G   FLIDGFPRNFDN+ GW + M +V DV  VL  DCPED +  RLL+RG+TSGRTDDN+E IRKRF TY E+T P+I ++  +    V  I      + VF + + A++P++ + +V  TQ LLNA+ + D+ATY  LC  +++  EP++ GH+++G+KFH+ YF N    G + V+++ Q
Sbjct:    6 RHKVLFVLGGPGAGKGTQCAKIVAQYGFVHLSAGDLLREERASGSENGDMIDRMIREGAIVPVKVTLDLIRKAMV----ASGRDLFLIDGFPRNFDNLTGWNDEMVDV-DVAGVLFYDCPEDEMERRLLERGKTSGRTDDNMEAIRKRFATYTESTMPIINHFAAQN--KVFHILATSTPEAVFEETKKAIEPIVSQHLVDTTQRLLNAVFQNDYATYRALCDDNISAIEPQSMGHVVEGMKFHEFYFKN-QGRGGLGVASVCQ 261          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: XP_009834169.1 (hypothetical protein H257_09610 [Aphanomyces astaci] >ETV76044.1 hypothetical protein H257_09610 [Aphanomyces astaci])

HSP 1 Score: 264.6 bits (675), Expect = 5.300e-67
Identity = 133/264 (50.38%), Postives = 185/264 (70.08%), Query Frame = 0
Query:  163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLR-AEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTI-AVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDVHVSTI 425
            R KV+FVLGGPG+GKGTQC ++V+K+GFVHLSAG+LLR+ R SG+  G +ID  +  G IVPV+++L L+R A +E  RD      FLIDGFPRNFDN++GWE  M +V DV  VL  DCPE+ + +RLL+RG+TSGRTDDN++ IRKRF TY E+T P+I ++  K  +  +  IP       VF +    ++P+++R +V  TQ LL+A+ +GDWATY  LC   ++  EP++ GH+I+GL+FH+ YF N   +G + VS I
Sbjct:    7 RSKVLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLESGRDL-----FLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSP---DVVFDETAKVIEPIVKRHLVDSTQRLLDAVFQGDWATYKDLCDECLSAIEPQSMGHVIEGLQFHEFYFKN-QGIGGLGVSKI 260          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: OQR90117.1 (flagellar adenylate kinase [Achlya hypogyna])

HSP 1 Score: 264.2 bits (674), Expect = 6.900e-67
Identity = 130/262 (49.62%), Postives = 178/262 (67.94%), Query Frame = 0
Query:  163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDVHVSTI 425
            R KV+FVLGGPGAGKGTQC ++V++YGFVHLSAG+LLR+ R SG+  G +ID  + +G IVPV+++L L+R  M    + +G   FLIDGFPRNFDN++GW   M +V DV  VL  DCPED +  RLLKRGETSGRTDDN E IRKRF TY E+T P+I ++  +    V  I      + VF + + A++P+++  +V+ TQ LL+A+   DW TY  LC   +   EP++ GH+++G+ FH+ YF N    G + VS+I
Sbjct:    6 RHKVLFVLGGPGAGKGTQCAKIVAQYGFVHLSAGDLLREERASGSANGDMIDRMIREGAIVPVKVTLDLIRKAM----NASGRDLFLIDGFPRNFDNLEGWNAEMSDV-DVAGVLFYDCPEDEMERRLLKRGETSGRTDDNAEAIRKRFKTYTESTMPIIDHFAAQN--KVFHILATASPEAVFEETQKAIEPIVKAHLVATTQRLLDAVFSNDWVTYQALCDPGLMAIEPQSMGHVVEGMAFHEFYFKNAGR-GGLGVSSI 259          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: CBJ30430.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 247.3 bits (630), Expect = 8.700e-62
Identity = 120/228 (52.63%), Postives = 164/228 (71.93%), Query Frame = 0
Query:  162 SRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMT 390
            S+P V+FVLGGPG+GKGTQCERL  +YG+VHLSAGELLR+ R SG+ +G+LID+Y+ +G+IVPV ISL+LLR  ME +      + FLIDGFPRN DN++GW+E M +VAD+ +VL + CPEDVL +RLL RG++SGRTDDN ET ++RF TY E T PV+  +Q K    V ++ G  D + VF  +   +  + E+E++   +  + A+  GDWA YA+LC+  MT
Sbjct:  171 SKPPVVFVLGGPGSGKGTQCERLAKEYGYVHLSAGELLRQERASGSSDGQLIDDYIAEGRIVPVAISLALLRKAMETSEPH---SRFLIDGFPRNRDNMEGWDEAMGDVADIRSVLFLYCPEDVLEKRLLSRGKSSGRTDDNAETAKRRFQTYVEMTLPVVEEFQQKG--IVPRVDGNQDIESVFRDVLLGLKSVHEKEVLDANRLAVEAVCTGDWAAYAQLCAPGMT 393          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: XP_009834170.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV76045.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 244.6 bits (623), Expect = 5.600e-61
Identity = 122/241 (50.62%), Postives = 170/241 (70.54%), Query Frame = 0
Query:  163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLR-AEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTI-AVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQ 402
            R KV+FVLGGPG+GKGTQC ++V+K+GFVHLSAG+LLR+ R SG+  G +ID  +  G IVPV+++L L+R A +E  RD      FLIDGFPRNFDN++GWE  M +V DV  VL  DCPE+ + +RLL+RG+TSGRTDDN++ IRKRF TY E+T P+I ++  K  +  +  IP       VF +    ++P+++R +V  TQ LL+A+ +GDWATY  LC   ++  EP++ GH+I+
Sbjct:    7 RSKVLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLESGRDL-----FLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSP---DVVFDETAKVIEPIVKRHLVDSTQRLLDAVFQGDWATYKDLCDECLSAIEPQSMGHVIE 238          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: OQS07783.1 (flagellar adenylate kinase [Thraustotheca clavata])

HSP 1 Score: 232.6 bits (592), Expect = 2.200e-57
Identity = 117/218 (53.67%), Postives = 156/218 (71.56%), Query Frame = 0
Query:  163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATY 381
            R KV+FVLGGPGAGKGTQC ++V++YGFVHLSAG+LLR  R SG+E G +ID  + +G IVPV+++L LLR  M D    +G   FLIDGFPRN+DN+QGW + M +V DV  VL  DCPED + +RLL+RG+TSGRTDDN++ IRKRF TY+E+T P+I ++  +    V  I       EVF + + A++P+++  +V  TQ LLNA+   DWATY
Sbjct:  640 RHKVLFVLGGPGAGKGTQCAKIVAEYGFVHLSAGDLLRAERASGSENGDMIDRMIREGAIVPVKVTLDLLRKAMVD----SGRDLFLIDGFPRNYDNLQGWNDEMTDV-DVAGVLFYDCPEDEMEKRLLERGKTSGRTDDNIDAIRKRFTTYHESTMPIIEHFAEQN--KVFHILAISTPDEVFEETKKAIEPIVQTHLVETTQRLLNAVFNNDWATY 850          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: GAQ89617.1 (nucleotide kinase activity [Klebsormidium nitens])

HSP 1 Score: 230.7 bits (587), Expect = 8.400e-57
Identity = 124/276 (44.93%), Postives = 171/276 (61.96%), Query Frame = 0
Query:  163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDV----------HVSTISQPR 429
            +P VIFVLGGPG+GKGTQCE +V +YGFVHLSAG+LLR   +SG++ G +I   + +GKIVP  +++ LL    ++A   +G   FLIDGFPRN +N   +E   +     E VL  DCPE+V+  RLL RG++SGR+DDN+E+IRKRF T+   + PV+ +Y G     V ++     +++VF  I+       +  ++  TQ LL+AI  GD+  YA+LC   +T FEPEAQGHL +GL FHK YFD    + D             STIS P+
Sbjct:  106 KPIVIFVLGGPGSGKGTQCENIVREYGFVHLSAGDLLRAEMKSGSQYGDMIATMIKEGKIVPSEVTVRLL----QNAMAASGKNKFLIDGFPRNDENRAAFER--ETGIQPEFVLFFDCPEEVMEARLLDRGKSSGRSDDNMESIRKRFKTFVNQSVPVVDHYDGLG--KVKKVSATRSKEDVFRSIQPFFTEFQQANLLEATQMLLDAIDGGDYEAYAKLCDEKLTAFEPEAQGHLAEGLGFHKFYFDLKKPVADAASPESLALIRPKSTISSPK 373          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: OAE30749.1 (hypothetical protein AXG93_2265s1060 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 227.6 bits (579), Expect = 7.100e-56
Identity = 122/272 (44.85%), Postives = 170/272 (62.50%), Query Frame = 0
Query:  162 SRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQ--GKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFD----NGNALGDVHVSTISQP 428
            S+P+V+FVLGGPG+GKGTQC ++V  YGFVHLSAG+LLR   +SG+ +G +I   + +GKIVP  ++++LL+  M +    + +  FLIDGFPRN +N   +E++   +   E +L  DCPE  L  RLL R E  GR DDN+ETIRKRF  + E++ PVI +Y+  GK      +I     R+EVF  I+    P +E ++   T+ LL  I  GD +TY R C   MT FEPEA GHL++GL FH+ YF+     GN   +   ST++ P
Sbjct:  112 SKPRVVFVLGGPGSGKGTQCAKIVDSYGFVHLSAGDLLRAEIKSGSPDGTMIQNMIKEGKIVPSSVTINLLKKAMAE----SNTDKFLIDGFPRNEENRADFEKVTGILP--EFILFFDCPETELERRLLGRNE--GRVDDNIETIRKRFKVFIESSLPVIDHYEKIGK----ARKIDATKSREEVFNAIDPLFRPFLETDLQRATEVLLKGIDSGDLSTYERFCDPGMTAFEPEASGHLVKGLDFHRFYFNKKVAGGNEAENFRQSTVTSP 371          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: PTQ44272.1 (hypothetical protein MARPO_0021s0126 [Marchantia polymorpha])

HSP 1 Score: 227.6 bits (579), Expect = 7.100e-56
Identity = 122/272 (44.85%), Postives = 170/272 (62.50%), Query Frame = 0
Query:  162 SRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQ--GKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFD----NGNALGDVHVSTISQP 428
            S+P+V+FVLGGPG+GKGTQC ++V  YGFVHLSAG+LLR   +SG+ +G +I   + +GKIVP  ++++LL+  M +    + +  FLIDGFPRN +N   +E++   +   E +L  DCPE  L  RLL R E  GR DDN+ETIRKRF  + E++ PVI +Y+  GK      +I     R+EVF  I+    P +E ++   T+ LL  I  GD +TY R C   MT FEPEA GHL++GL FH+ YF+     GN   +   ST++ P
Sbjct:  112 SKPRVVFVLGGPGSGKGTQCAKIVDSYGFVHLSAGDLLRAEIKSGSPDGTMIQNMIKEGKIVPSSVTINLLKKAMAE----SNTDKFLIDGFPRNEENRADFEKVTGILP--EFILFFDCPETELERRLLGRNE--GRVDDNIETIRKRFKVFIESSLPVIDHYEKIGK----ARKIDATKSREEVFNAIDPLFRPFLETDLQRATEVLLKGIDSGDLSTYERFCDPGMTAFEPEASGHLVKGLDFHRFYFNKKVAGGNEAENFRQSTVTSP 371          
BLAST of NO23G00060 vs. NCBI_GenBank
Match: POM61805.1 (Flagellar adenylate Kinase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 216.9 bits (551), Expect = 1.300e-52
Identity = 112/195 (57.44%), Postives = 143/195 (73.33%), Query Frame = 0
Query:  165 KVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGW-EELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTI-AVHQIPGQLDRQEVFAKIEAAVDPLI 358
            K++FVLGGPGAGKGTQC +LV KYGFVHLSAG+LLR+ R+SG+E G+LID  + +G+IVPV+I+LSLL    + A  ++G   FLIDGFPRNFDN+QGW EE+ Q+   V+ VL  DCPE V+ ERLL+RG+TSGRTDDN E IRKRF TY ++T PVI +Y+ +  +  V   PG     EVF    A + PL+
Sbjct:    8 KILFVLGGPGAGKGTQCAKLVEKYGFVHLSAGDLLREERQSGSENGELIDRMIKEGQIVPVKITLSLL----QQAMIKSGRDLFLIDGFPRNFDNLQGWQEEMAQDEFQVQGVLFFDCPESVMEERLLERGKTSGRTDDNAEAIRKRFRTYLDSTMPVIMHYEKQDKVFKVDATPGP---DEVFEATSALIGPLV 195          
The following BLAST results are available for this feature:
BLAST of NO23G00060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
5001000150020002500300035004000SequenceXP_008616160.1XP_009834169.1OQR90117.1CBJ30430.1XP_009834170.1OQS07783.1GAQ89617.1OAE30749.1PTQ44272.1POM61805.1
Match NameE-valueIdentityDescription
XP_008616160.14.000e-6749.24cytidylate kinase [Saprolegnia diclina VS20] >EQC3... [more]
XP_009834169.15.300e-6750.38hypothetical protein H257_09610 [Aphanomyces astac... [more]
OQR90117.16.900e-6749.62flagellar adenylate kinase [Achlya hypogyna][more]
CBJ30430.18.700e-6252.63conserved unknown protein [Ectocarpus siliculosus][more]
XP_009834170.15.600e-6150.62hypothetical protein, variant [Aphanomyces astaci]... [more]
OQS07783.12.200e-5753.67flagellar adenylate kinase [Thraustotheca clavata][more]
GAQ89617.18.400e-5744.93nucleotide kinase activity [Klebsormidium nitens][more]
OAE30749.17.100e-5644.85hypothetical protein AXG93_2265s1060 [Marchantia p... [more]
PTQ44272.17.100e-5644.85hypothetical protein MARPO_0021s0126 [Marchantia p... [more]
POM61805.11.300e-5257.44Flagellar adenylate Kinase [Phytophthora palmivora... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL037nonsL037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR095ncniR095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008477NSK008477Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00060.3NO23G00060.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00060.2NO23G00060.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00060.1NO23G00060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675078gene_10841Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101592g1gene7428Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00060.3NO23G00060.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00060.2NO23G00060.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00060.1NO23G00060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00060 ID=NO23G00060|Name=NO23G00060|organism=Nannochloropsis oceanica|type=gene|length=4127bp
CCGCTTACTTGCTCGATAGTCTCTAATCATGTGTGGGGTGGAGTGTGTCC
AGTCAATTGTGTCTGTGGATAGAGGACAGTTACCGTTTGTGGTAGGCAGA
GAGTCCGCGAAGGCCCAGCAGGAGGAGGCAGCCCTGCAACCATGCAGCAG
TTGCCAATGTCGGGCTAGCAGCATACCTCTCCGACTCCTCCCTCACATCT
CCTCTCCGCACACTCAGGACCTCAGCAACGAAGTCAGCTAGTCTAGCAAG
GCCAGCCATGCGTCCACCGCCTGCCGTCTTTGGTTTCCAACGCGgttagt
ctctttctccttcccagcctcccccgcctccctccctccctccctccctc
cctccctcgtcccatctcacgcaaacacaaacacatagGCGGCGGCGCCC
TGGCCCTCATCCTCTGTTTCCTCCATCGCCGCGGCGGGATCTTGTCCTTC
GTACAGgtacgatcgcagtggggatcaggagaaaggggagaggagctagg
agtatagagggaggagagaggctgggcctggcttgctgggtgaatatcca
ccgcgatgaataacagcgtgaaagaagagaacaacatgataaaaaggaag
gacagggaggaggggaagaccccggaataatccgcgaactcaaacgcccc
gtttgacatccatacatccctcccttgatcccttcctccctacctaccta
cctacctacctacctacccccctgtttcaacagGCCCTTCGTCCTCCCTT
CCACCGTCCCTTACGCTTATCCCATGCCGCAGCCGCCTTTTCTTCTGCTG
CCGTCTCCTCCTCCCCTCCCTCCTTCTTCTCCCTTTCAGCCCTTAGAAGA
AGAGGAGGGAAAGGAGGGCGGGAGGGAGGAAGCACATCTGCACGACGAGC
ATTTGCCTCCTCTTCCTCCTCCTCCTCATCGTCTTCTGCCTCCTCCTCCT
CGTCTTCTGTCTCCTCCGCTTCTTCTCCCTCCTCCTCCTCCTCTGCGTCG
TCGAAAGGCATCATCCTGGCGGGTGCGGCAACTGTGCTGGCCGCCTCCAC
GAGCAGTGACATGCGGCAGCAAGGgtgaggaggatggagggagggaggga
gaaagagattgacgtatagatagatgcattgacatacgacaggaagggtg
tgaggaggatggagggagagagggatggagaaagagagagacgtatggat
agacgcagtgacatacgaccgcaagggtgaggaggagggaggaaaggagg
gagtgagaaagtcatgagtagatggacgatgttcatgttgttccctcatc
tgtccactaaaaccacagGGAGGTCTCGGCATCGGCCGCCGGGTCCTACA
AAGGCAGTCGTCCCAAGgtgcgctcagcccccctccctccctccctccct
ccctccctccctccctccctccttccctccctccttccctccctcctcca
ccacacattctattttgtcgtgggcaggtccgggtgtcggccacggcagc
tggcagtgcgagcggggggtgcccttcacatgcaggagcctctttcgcct
cacctccctccatccctccctccctcctcctcacccttgagGTCATCTTC
GTCTTGGGCGGCCCGGGCGCCGGCAAAGGCACGCAATGCGAGCGTCTGGT
GTCAAAGTACGGGTTTGTCCACCTCTCGGCGGGTGAGCTGCTGCGGAAGG
CGAGGGAGAGCGGGACCGAGGAGGGAAAGCTCATTGACGAGTACCTGGTG
CAAGgtagggagggagggagggagggagggagggaaggagggagggaggg
agggagggagggagggggggagggcttgacgggagactccctgacttttc
atgatatcggtgactgcctgctgcaagatacacgttctgtatgcccaccc
gccctccctccgtcgatccctcccttcccccctccctccctccctctttc
cctccctccctccctcagGCAAAATCGTGCCTGTCCGCATCTCCCTCTCC
CTCCTCCGGGCCGAGATGGAGGATGCCAGGGATCGCGCCGGCTCAACCCA
CTTCCTCATTGACGGCTTCCCGCGGAATTTCGACAACGTCCAGgtgccct
ccctccctccctccctccctccctccctcctccccctttccctccctccc
ctctctccctcctgcgtgttgagcctctcaccctccctccctccttcctc
cctgccctctctctctccctccctccctccccttcccccccttcctccct
ctctcttctaccaagGGCTGGGAGGAGCTCATGCAGGAGGTGGCGGACGT
GGAGGCCGTGCTGGCCATCGACTGCCCCGAGGATGTCTTGATTGgtgagg
agggagggagggagggagggagggagggagatatggagggagggagggtg
tggtcggtggaaaaagggtcgatgggggacatatgtatgtgtatactgat
ggttttggggtacatacgtacataaatacatatctatatatatatatatg
tatgtcgattgtaagatgcacatatgttagtaggttcaggatacacgtat
ttgagtgtgagggggcgtgacaggtgtgagaatgatccgtcgggcttgac
acgcgggagacgatcaggaggacgtaagaataggaagggagggaaagagg
ggagggaggaaagaggggggaggatagcggaacaggtgttgattaagtca
agtgctcctgcatagcaactactatgacttaccctccctccctccccctt
cacttcagAGCGCCTCCTGAAGCGGGGCGAGACGAGTGGCCGCACGGACG
ACAACGTGGAGACCATCCGGAAGCGCTTTCACACCTACAACGAAGCTgtc
cgtccttcctccttccctccctccctccttccctccctccttccctccct
ccctcctaccgaggtctcccccttaccctcccttcctccctccctccctc
cttccgtccctccctccctcccccccccagACGCGGCCCGTCATCGCATA
CTATCAAGGCAAACCAACCATCGCGGTGCACCAAATCCCCGGCCAGCTCG
ACCGGCAGGAAGTGTTTGCCAAAATAGAGGCGGCCGTCGACCCGCTCATC
GAGCGGGAGgtacgtgctggctcgccgtccttcctctctctttatcccgc
ccggcctgctcatttgagacaaaagagatgagaggggctttggactccgt
cgtcgatagggaggatagtgatgtctgccctccttccctctctctttccc
tccttcctttcatcttcacgtgacctccctccctccctccctccctccct
cagATCGTCTCGCTCACTCAAACCCTCCTGAACGCCATTGCCGAGGGCGA
TTGGGCCACCTACGCCCGCCTCTGCTCCCACGACATGACTTGCTTCGAGC
CCGAGGCTCAGGGGCACCTCATCCAAGGCCTGgtgcgtgtcggtctctcc
tttctccctccctccctccctctctccctccctcctgcccttgtctaatc
tctctttctttctttttctctctctctccttctttcccgctcattttccc
ctccctccctccctccctcctcccctccctcccgctctccctcgaagAAA
TTTCACAAGGTCTACTTCGATAACGGCAACGCGCTGGGTGACGTCCACGT
TTCCACCATCTCCCAGCCTAGgtagggatgggaaaggaggaagggagggc
ttagtttgacggcactcggagggatcagggttgtaacggcctgttactcc
ttgacgcaccccctaacccactcccatcataactcctccttccccccctc
cctccctctcatccaaagCGTGCGAGTACTGGGCAAGACCGCCGTGTGCG
TCTACGTGCGCCTGGTGCAGTCGGTTAACCCTGTCACCAAATTGACTTCT
TCGGCCTCTCACGAAGAGACCCGCGTGTGGACCTTGGTGGAAGGAGGGCA
GGAGGGAGGGAGGGAGGGAGGGAAGGAGGGCTTGACAGGGGTAGGCTGGA
AGTGTGTGCATTTCCATCGGTCACCCGCGAATGCCTCGGTACCGTCCTCG
TGAAGGCAGGAGGGAGGGAGGGATGGAGGGAGGAAGGGGTGGAAGAGGGC
AATCATGACGGTATCACAAAAGTAAGG
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protein sequence of NO23G00060.3

>NO23G00060.3-protein ID=NO23G00060.3-protein|Name=NO23G00060.3|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MRPPPAVFGFQRGGGALALILCFLHRRGGILSFVQALRPPFHRPLRLSHA
AAAFSSAAVSSSPPSFFSLSALRRRGGKGGREGGSTSARRAFASSSSSSS
SSSASSSSSSVSSASSPSSSSSASSKGIILAGAATVLAASTSSDMRQQGE
VSASAAGSYKGSRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLR
KARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLI
DGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRT
DDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIE
AAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLI
QGLKFHKVYFDNGNALGDVHVSTISQPR*
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protein sequence of NO23G00060.2

>NO23G00060.2-protein ID=NO23G00060.2-protein|Name=NO23G00060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=384bp
MRPPPAVFGFQRGGGALALILCFLHRRGGILSFVQALRPPFHRPLRLSHA
AAAFSSAAVSSSPPSFFSLSALRRRGGKGGREGGSTSARRAFASSSSSSS
SSSASSSSSSVSSASSPSSSSSASSKGIILAGAATVLAASTSSDMRQQGE
VSASAAGSYKGSRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLR
KARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLI
DGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRT
DDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIE
AAVDPLIEREVRAGSPSFLSLYPARPAHLRQKR*
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protein sequence of NO23G00060.1

>NO23G00060.1-protein ID=NO23G00060.1-protein|Name=NO23G00060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bp
MRPPPAVFGFQRGGGALALILCFLHRRGGILSFVQALRPPFHRPLRLSHA
AAAFSSAAVSSSPPSFFSLSALRRRGGKGGREGGSTSARRAFASSSSSSS
SSSASSSSSSVSSASSPSSSSSASSKGIILAGAATVLAASTSSDMRQQGE
VSASAAGSYKGSRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLR
KARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLI
DGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRT
DDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIE
AAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLI
QGLKFHKVYFDNGNALGDVHVSTISQPSVRVLGKTAVCVYVRLVQSVNPV
TKLTSSASHEETRVWTLVEGGQEGGREGGKEGLTGVGWKCVHFHRSPANA
SVPSS*
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