NO23G00060, NO23G00060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00060 vs. NCBI_GenBank
Match: XP_008616160.1 (cytidylate kinase [Saprolegnia diclina VS20] >EQC30307.1 cytidylate kinase [Saprolegnia diclina VS20]) HSP 1 Score: 265.0 bits (676), Expect = 4.000e-67 Identity = 130/264 (49.24%), Postives = 184/264 (69.70%), Query Frame = 0 Query: 163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDVHVSTISQ 427 R KV+FVLGGPGAGKGTQC ++V++YGFVHLSAG+LLR+ R SG+E G +ID + +G IVPV+++L L+R M +G FLIDGFPRNFDN+ GW + M +V DV VL DCPED + RLL+RG+TSGRTDDN+E IRKRF TY E+T P+I ++ + V I + VF + + A++P++ + +V TQ LLNA+ + D+ATY LC +++ EP++ GH+++G+KFH+ YF N G + V+++ Q Sbjct: 6 RHKVLFVLGGPGAGKGTQCAKIVAQYGFVHLSAGDLLREERASGSENGDMIDRMIREGAIVPVKVTLDLIRKAMV----ASGRDLFLIDGFPRNFDNLTGWNDEMVDV-DVAGVLFYDCPEDEMERRLLERGKTSGRTDDNMEAIRKRFATYTESTMPIINHFAAQN--KVFHILATSTPEAVFEETKKAIEPIVSQHLVDTTQRLLNAVFQNDYATYRALCDDNISAIEPQSMGHVVEGMKFHEFYFKN-QGRGGLGVASVCQ 261
BLAST of NO23G00060 vs. NCBI_GenBank
Match: XP_009834169.1 (hypothetical protein H257_09610 [Aphanomyces astaci] >ETV76044.1 hypothetical protein H257_09610 [Aphanomyces astaci]) HSP 1 Score: 264.6 bits (675), Expect = 5.300e-67 Identity = 133/264 (50.38%), Postives = 185/264 (70.08%), Query Frame = 0 Query: 163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLR-AEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTI-AVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDVHVSTI 425 R KV+FVLGGPG+GKGTQC ++V+K+GFVHLSAG+LLR+ R SG+ G +ID + G IVPV+++L L+R A +E RD FLIDGFPRNFDN++GWE M +V DV VL DCPE+ + +RLL+RG+TSGRTDDN++ IRKRF TY E+T P+I ++ K + + IP VF + ++P+++R +V TQ LL+A+ +GDWATY LC ++ EP++ GH+I+GL+FH+ YF N +G + VS I Sbjct: 7 RSKVLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLESGRDL-----FLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSP---DVVFDETAKVIEPIVKRHLVDSTQRLLDAVFQGDWATYKDLCDECLSAIEPQSMGHVIEGLQFHEFYFKN-QGIGGLGVSKI 260
BLAST of NO23G00060 vs. NCBI_GenBank
Match: OQR90117.1 (flagellar adenylate kinase [Achlya hypogyna]) HSP 1 Score: 264.2 bits (674), Expect = 6.900e-67 Identity = 130/262 (49.62%), Postives = 178/262 (67.94%), Query Frame = 0 Query: 163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDVHVSTI 425 R KV+FVLGGPGAGKGTQC ++V++YGFVHLSAG+LLR+ R SG+ G +ID + +G IVPV+++L L+R M + +G FLIDGFPRNFDN++GW M +V DV VL DCPED + RLLKRGETSGRTDDN E IRKRF TY E+T P+I ++ + V I + VF + + A++P+++ +V+ TQ LL+A+ DW TY LC + EP++ GH+++G+ FH+ YF N G + VS+I Sbjct: 6 RHKVLFVLGGPGAGKGTQCAKIVAQYGFVHLSAGDLLREERASGSANGDMIDRMIREGAIVPVKVTLDLIRKAM----NASGRDLFLIDGFPRNFDNLEGWNAEMSDV-DVAGVLFYDCPEDEMERRLLKRGETSGRTDDNAEAIRKRFKTYTESTMPIIDHFAAQN--KVFHILATASPEAVFEETQKAIEPIVKAHLVATTQRLLDAVFSNDWVTYQALCDPGLMAIEPQSMGHVVEGMAFHEFYFKNAGR-GGLGVSSI 259
BLAST of NO23G00060 vs. NCBI_GenBank
Match: CBJ30430.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 247.3 bits (630), Expect = 8.700e-62 Identity = 120/228 (52.63%), Postives = 164/228 (71.93%), Query Frame = 0 Query: 162 SRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMT 390 S+P V+FVLGGPG+GKGTQCERL +YG+VHLSAGELLR+ R SG+ +G+LID+Y+ +G+IVPV ISL+LLR ME + + FLIDGFPRN DN++GW+E M +VAD+ +VL + CPEDVL +RLL RG++SGRTDDN ET ++RF TY E T PV+ +Q K V ++ G D + VF + + + E+E++ + + A+ GDWA YA+LC+ MT Sbjct: 171 SKPPVVFVLGGPGSGKGTQCERLAKEYGYVHLSAGELLRQERASGSSDGQLIDDYIAEGRIVPVAISLALLRKAMETSEPH---SRFLIDGFPRNRDNMEGWDEAMGDVADIRSVLFLYCPEDVLEKRLLSRGKSSGRTDDNAETAKRRFQTYVEMTLPVVEEFQQKG--IVPRVDGNQDIESVFRDVLLGLKSVHEKEVLDANRLAVEAVCTGDWAAYAQLCAPGMT 393
BLAST of NO23G00060 vs. NCBI_GenBank
Match: XP_009834170.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV76045.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 244.6 bits (623), Expect = 5.600e-61 Identity = 122/241 (50.62%), Postives = 170/241 (70.54%), Query Frame = 0 Query: 163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLR-AEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTI-AVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQ 402 R KV+FVLGGPG+GKGTQC ++V+K+GFVHLSAG+LLR+ R SG+ G +ID + G IVPV+++L L+R A +E RD FLIDGFPRNFDN++GWE M +V DV VL DCPE+ + +RLL+RG+TSGRTDDN++ IRKRF TY E+T P+I ++ K + + IP VF + ++P+++R +V TQ LL+A+ +GDWATY LC ++ EP++ GH+I+ Sbjct: 7 RSKVLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLESGRDL-----FLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSP---DVVFDETAKVIEPIVKRHLVDSTQRLLDAVFQGDWATYKDLCDECLSAIEPQSMGHVIE 238
BLAST of NO23G00060 vs. NCBI_GenBank
Match: OQS07783.1 (flagellar adenylate kinase [Thraustotheca clavata]) HSP 1 Score: 232.6 bits (592), Expect = 2.200e-57 Identity = 117/218 (53.67%), Postives = 156/218 (71.56%), Query Frame = 0 Query: 163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATY 381 R KV+FVLGGPGAGKGTQC ++V++YGFVHLSAG+LLR R SG+E G +ID + +G IVPV+++L LLR M D +G FLIDGFPRN+DN+QGW + M +V DV VL DCPED + +RLL+RG+TSGRTDDN++ IRKRF TY+E+T P+I ++ + V I EVF + + A++P+++ +V TQ LLNA+ DWATY Sbjct: 640 RHKVLFVLGGPGAGKGTQCAKIVAEYGFVHLSAGDLLRAERASGSENGDMIDRMIREGAIVPVKVTLDLLRKAMVD----SGRDLFLIDGFPRNYDNLQGWNDEMTDV-DVAGVLFYDCPEDEMEKRLLERGKTSGRTDDNIDAIRKRFTTYHESTMPIIEHFAEQN--KVFHILAISTPDEVFEETKKAIEPIVQTHLVETTQRLLNAVFNNDWATY 850
BLAST of NO23G00060 vs. NCBI_GenBank
Match: GAQ89617.1 (nucleotide kinase activity [Klebsormidium nitens]) HSP 1 Score: 230.7 bits (587), Expect = 8.400e-57 Identity = 124/276 (44.93%), Postives = 171/276 (61.96%), Query Frame = 0 Query: 163 RPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFDNGNALGDV----------HVSTISQPR 429 +P VIFVLGGPG+GKGTQCE +V +YGFVHLSAG+LLR +SG++ G +I + +GKIVP +++ LL ++A +G FLIDGFPRN +N +E + E VL DCPE+V+ RLL RG++SGR+DDN+E+IRKRF T+ + PV+ +Y G V ++ +++VF I+ + ++ TQ LL+AI GD+ YA+LC +T FEPEAQGHL +GL FHK YFD + D STIS P+ Sbjct: 106 KPIVIFVLGGPGSGKGTQCENIVREYGFVHLSAGDLLRAEMKSGSQYGDMIATMIKEGKIVPSEVTVRLL----QNAMAASGKNKFLIDGFPRNDENRAAFER--ETGIQPEFVLFFDCPEEVMEARLLDRGKSSGRSDDNMESIRKRFKTFVNQSVPVVDHYDGLG--KVKKVSATRSKEDVFRSIQPFFTEFQQANLLEATQMLLDAIDGGDYEAYAKLCDEKLTAFEPEAQGHLAEGLGFHKFYFDLKKPVADAASPESLALIRPKSTISSPK 373
BLAST of NO23G00060 vs. NCBI_GenBank
Match: OAE30749.1 (hypothetical protein AXG93_2265s1060 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 227.6 bits (579), Expect = 7.100e-56 Identity = 122/272 (44.85%), Postives = 170/272 (62.50%), Query Frame = 0 Query: 162 SRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQ--GKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFD----NGNALGDVHVSTISQP 428 S+P+V+FVLGGPG+GKGTQC ++V YGFVHLSAG+LLR +SG+ +G +I + +GKIVP ++++LL+ M + + + FLIDGFPRN +N +E++ + E +L DCPE L RLL R E GR DDN+ETIRKRF + E++ PVI +Y+ GK +I R+EVF I+ P +E ++ T+ LL I GD +TY R C MT FEPEA GHL++GL FH+ YF+ GN + ST++ P Sbjct: 112 SKPRVVFVLGGPGSGKGTQCAKIVDSYGFVHLSAGDLLRAEIKSGSPDGTMIQNMIKEGKIVPSSVTINLLKKAMAE----SNTDKFLIDGFPRNEENRADFEKVTGILP--EFILFFDCPETELERRLLGRNE--GRVDDNIETIRKRFKVFIESSLPVIDHYEKIGK----ARKIDATKSREEVFNAIDPLFRPFLETDLQRATEVLLKGIDSGDLSTYERFCDPGMTAFEPEASGHLVKGLDFHRFYFNKKVAGGNEAENFRQSTVTSP 371
BLAST of NO23G00060 vs. NCBI_GenBank
Match: PTQ44272.1 (hypothetical protein MARPO_0021s0126 [Marchantia polymorpha]) HSP 1 Score: 227.6 bits (579), Expect = 7.100e-56 Identity = 122/272 (44.85%), Postives = 170/272 (62.50%), Query Frame = 0 Query: 162 SRPKVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGWEELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQ--GKPTIAVHQIPGQLDRQEVFAKIEAAVDPLIEREIVSLTQTLLNAIAEGDWATYARLCSHDMTCFEPEAQGHLIQGLKFHKVYFD----NGNALGDVHVSTISQP 428 S+P+V+FVLGGPG+GKGTQC ++V YGFVHLSAG+LLR +SG+ +G +I + +GKIVP ++++LL+ M + + + FLIDGFPRN +N +E++ + E +L DCPE L RLL R E GR DDN+ETIRKRF + E++ PVI +Y+ GK +I R+EVF I+ P +E ++ T+ LL I GD +TY R C MT FEPEA GHL++GL FH+ YF+ GN + ST++ P Sbjct: 112 SKPRVVFVLGGPGSGKGTQCAKIVDSYGFVHLSAGDLLRAEIKSGSPDGTMIQNMIKEGKIVPSSVTINLLKKAMAE----SNTDKFLIDGFPRNEENRADFEKVTGILP--EFILFFDCPETELERRLLGRNE--GRVDDNIETIRKRFKVFIESSLPVIDHYEKIGK----ARKIDATKSREEVFNAIDPLFRPFLETDLQRATEVLLKGIDSGDLSTYERFCDPGMTAFEPEASGHLVKGLDFHRFYFNKKVAGGNEAENFRQSTVTSP 371
BLAST of NO23G00060 vs. NCBI_GenBank
Match: POM61805.1 (Flagellar adenylate Kinase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 216.9 bits (551), Expect = 1.300e-52 Identity = 112/195 (57.44%), Postives = 143/195 (73.33%), Query Frame = 0 Query: 165 KVIFVLGGPGAGKGTQCERLVSKYGFVHLSAGELLRKARESGTEEGKLIDEYLVQGKIVPVRISLSLLRAEMEDARDRAGSTHFLIDGFPRNFDNVQGW-EELMQEVADVEAVLAIDCPEDVLIERLLKRGETSGRTDDNVETIRKRFHTYNEATRPVIAYYQGKPTI-AVHQIPGQLDRQEVFAKIEAAVDPLI 358 K++FVLGGPGAGKGTQC +LV KYGFVHLSAG+LLR+ R+SG+E G+LID + +G+IVPV+I+LSLL + A ++G FLIDGFPRNFDN+QGW EE+ Q+ V+ VL DCPE V+ ERLL+RG+TSGRTDDN E IRKRF TY ++T PVI +Y+ + + V PG EVF A + PL+ Sbjct: 8 KILFVLGGPGAGKGTQCAKLVEKYGFVHLSAGDLLREERQSGSENGELIDRMIKEGQIVPVKITLSLL----QQAMIKSGRDLFLIDGFPRNFDNLQGWQEEMAQDEFQVQGVLFFDCPESVMEERLLERGKTSGRTDDNAEAIRKRFRTYLDSTMPVIMHYEKQDKVFKVDATPGP---DEVFEATSALIGPLV 195 The following BLAST results are available for this feature:
BLAST of NO23G00060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00060 ID=NO23G00060|Name=NO23G00060|organism=Nannochloropsis oceanica|type=gene|length=4127bpback to top protein sequence of NO23G00060.3 >NO23G00060.3-protein ID=NO23G00060.3-protein|Name=NO23G00060.3|organism=Nannochloropsis oceanica|type=polypeptide|length=429bpback to top protein sequence of NO23G00060.2 >NO23G00060.2-protein ID=NO23G00060.2-protein|Name=NO23G00060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=384bpback to top protein sequence of NO23G00060.1 >NO23G00060.1-protein ID=NO23G00060.1-protein|Name=NO23G00060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bpback to top Synonyms
Publications
|