NO22G01950, NO22G01950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01950 vs. NCBI_GenBank
Match: CBJ27751.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 112.1 bits (279), Expect = 6.900e-21 Identity = 248/492 (50.41%), Postives = 289/492 (58.74%), Query Frame = 0 Query: 203 MLVKNAVPVPKDITDEKARLQYELSLREDDIDSSSNVYKMVPVEEFGAALLRGMGWAGPSADDVQIYQASARP----------QGLGLGANPAALDLDPEGHWKRKGAXXXXXXXXXXXXXXXXXXXXXLVKAAEERLRKQ------VLKDGDVVRLAKGEYGGKRAR------VTRAAGVAGLHMIEVSLEDVERHPASLPPSLLVLRIKQTDCFLVPPSELQMRPFRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDPRGTSWLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGEATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMAE 673 +L +N +P ++ E A+ +++L R +D + S Y VPV EFGAALLRGMGW GP P LGLGA P + K+ G K EERLR L DVV L++G GG+R R V + GV GL+ I V +ED + + ++ V EL RPF + XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P +WL +I+VR+I + GGR Y KG VVDVPR G+ATV +D G +LEGVK RHLET LP GG V+++RG + GKLL +E +VQ V EDL+ V + LDD+AE Sbjct: 199 LLEQNMIPGLMEVDGEDAKFRHDLGHRAEDFSARSKAYVDVPVAEFGAALLRGMGWKGPEGXXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPPEEMKRPRTKKPGEKPRSSDAERLKIWEK--------KVQEERLRASRPSAAAQLAVMDVVELSEG--GGERGRRRPRAMVLKTQGVPGLNKISVRMEDTGEK----------VLVDKSTATRVSEDELARRPFSENKDXXXXXXXXXXXXXXXXXXXXXXXXXXVEREDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--PAWLRANIRVRVIHKSYGGGRA-----------YLGKGRVVDVPRAGQATVRMDLGELVLEGVKERHLETVLPARGGKVIVVRGAEKGATGKLLAKNKEKETALVQ-VYEDLRAVTLSLDDVAE 656
BLAST of NO22G01950 vs. NCBI_GenBank
Match: GAX19303.1 (G patch domain and KOW motifs-containing protein [Fistulifera solaris]) HSP 1 Score: 98.2 bits (243), Expect = 1.000e-16 Identity = 142/465 (30.54%), Postives = 202/465 (43.44%), Query Frame = 0 Query: 209 VPVPKDITDEKARLQYELSLREDDIDSSSNVYKMVPVEEFGAALLRGMGWAG-PSADDVQIYQASARPQGLGLGANPAALDLDPEGHWKRKGAXXXXXXXXXXXXXXXXXXXXXLVKAAEERLRKQVLKDGDVVRLAKGEYGGKRARVTRAAGVAGLHMIEVSLEDVERHPASLPPSLLVLRIKQTDCFLVPPSELQMRPFRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDPRGTSWLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGEATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMAE 673 + K+ ++ + + +L D+ + S Y+ VP+ EFG+ALLRGMGW G S D ++ + RP LGLGA P DL H ++K ++ ++ +++ L+DG ++ + G +RA++ + GV GL+ +++ E H +V R + D L SEL+ +PFR XXXXXXXXXXXXXXXXXXXXXXXXXXX DD W++PHI+VRIITE+ LG R +++ K VVVDV P AT+ LD G IL+ V R+LETALP GG+V++L+ H +G+LL E GR GVVQ + ED+ V + LDD+AE Sbjct: 101 ITATKNSNTDREQYEQDLQRLPDEPNIHSEQYQRVPIAEFGSALLRGMGWNGEESKGDTEM--SMPRPHRLGLGATP---DLSESVHLRKKPLRPDQFQQQAKLQKQREEYEKQRIE-QKKWDKQKTLQDGSLIMV-----GSQRAQIIQLVGVPGLNNVKIQFEGDSEH-------TIVKRGELGDLLL--RSELEEQPFRHAESTNIKKEDSRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLN----------------------------------------------------------------------------------------DDRSAIKWVVPHIRVRIITEK-LG-----------RRYFKEKAVVVDV-TPKGATLQLD-SGTILDQVPERYLETALPKTGGLVVILKDHH--PKGRLL--EKGRSTGVVQYL-EDMTVETLSLDDLAE 438
BLAST of NO22G01950 vs. NCBI_GenBank
Match: GAX24602.1 (G patch domain and KOW motifs-containing protein [Fistulifera solaris]) HSP 1 Score: 97.1 bits (240), Expect = 2.300e-16 Identity = 123/465 (26.45%), Postives = 181/465 (38.92%), Query Frame = 0 Query: 209 VPVPKDITDEKARLQYELSLREDDIDSSSNVYKMVPVEEFGAALLRGMGWAG-PSADDVQIYQASARPQGLGLGANPAALDLDPEGHWKRKGAXXXXXXXXXXXXXXXXXXXXXLVKAAEERLRKQVLKDGDVVRLAKGEYGGKRARVTRAAGVAGLHMIEVSLEDVERHPASLPPSLLVLRIKQTDCFLVPPSELQMRPFRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDPRGTSWLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGEATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMAE 673 + K+ ++ + + +L ++++ S Y+ VP+ EFG+ALLRGMGW G S D ++ + RP LGLGA P DL +K ++ ++ +++ L+DG ++ + G KRA++ + GV GL+ +++ E H +V R D L SEL+ RPFR XXXXXXXX DD W++PHI+VRIITE+ LG R +++ K VVVDV P AT+ LD G IL+ V R+LETALP GG+V++L+ H +G+LL E GR GVVQ + ED+ V + LDD+AE Sbjct: 100 IAAAKNSNTDREQYEQDLQRLPEELNIHSEQYQRVPIAEFGSALLRGMGWTGEESKGDTEM--SMPRPHRLGLGATP---DLSEPVQLSKKPLRPDQFQQQAKLQKKREEYEKQRIE-QKKWDKQRTLQDGSLIMV-----GSKRAQIIQLVGVPGLNNVKIQFEGDSEH-------TIVKRGALGDLLL--RSELEERPFRYAESTNIKKEDSRRDPLNDDGHRANTKRKDRXXXXXXXXLKRSRLD----------------------------------------------------------------------------------------DDRSALKWVVPHIRVRIITEK-LG-----------RRYFKEKAVVVDV-TPKGATLQLD-SGTILDKVPERYLETALPKTGGLVVILKDHH--PKGRLL--EKGRSTGVVQYL-EDMTVETLSLDDLAE 437
BLAST of NO22G01950 vs. NCBI_GenBank
Match: OEU22164.1 (hypothetical protein FRACYDRAFT_178544 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 94.4 bits (233), Expect = 1.500e-15 Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 0 Query: 549 TSWLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGEATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMAE 673 TSWL+P+I+VR+I+ + GG S Y+ KGVVVDV R G AT+ + G I V RHLETALP GG ++L G R +G+LLE +S + GVVQ V ED+ V+ LD+MAE Sbjct: 2 TSWLIPNIRVRVISSK-YGG-----------SVYKEKGVVVDVTRRGVATLKMGNGQVI--NVAERHLETALPKAGGNSIILSGDQRHSKGRLLERDSKKNRGVVQ-VFEDMSVITTSLDEMAE 110
BLAST of NO22G01950 vs. NCBI_GenBank
Match: EWM20392.1 (hypothetical protein Naga_100900g3, partial [Nannochloropsis gaditana]) HSP 1 Score: 92.0 bits (227), Expect = 7.400e-15 Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 0 Query: 610 GVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMA 672 G+ AR+LET LP GG+VLLLRGPHRLQRGKLLEV+ REE +VQL+++DLQV+R+ LDD+A Sbjct: 39 GLPARYLETLLPSTGGLVLLLRGPHRLQRGKLLEVDRRREEAIVQLIEDDLQVLRLSLDDVA 100
BLAST of NO22G01950 vs. NCBI_GenBank
Match: GAQ87593.1 (G-patch domain-containing protein [Klebsormidium nitens]) HSP 1 Score: 89.4 bits (220), Expect = 4.800e-14 Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 0 Query: 551 WLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGEATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVD---EDLQVVRMPLDDMAE 673 WL+PHI+VRI+++ GR Y K VVDV P A + +DE G+ L+GV LETALP GG V ++ G R +RG+LLE +S R GVVQ D E ++VVR+ LD +AE Sbjct: 434 WLVPHIRVRIVSKSLQSGR-----------LYLKKATVVDVVTPTTADLTVDETGQSLQGVHQSSLETALPKRGGNVAVVTGKERGRRGRLLERDSERGIGVVQFSDHRVEGVEVVRLELDSVAE 547
BLAST of NO22G01950 vs. NCBI_GenBank
Match: XP_002293329.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89065.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 89.0 bits (219), Expect = 6.300e-14 Identity = 52/126 (41.27%), Postives = 75/126 (59.52%), Query Frame = 0 Query: 551 WLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGE----ATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMAE 673 WLLP+I+VR ++ K FY KG+V DV + + A + +D G++L+ + R+LETALP GG V++L G +R ++G+LLE SG GVVQL EDL+VV + LD +AE Sbjct: 597 WLLPNIRVRFVS-------------NKIPKFYLQKGIVQDVIQSQQSSPKAVLLMDSNGQVLDNIPERYLETALPKTGGNVIVLEGRYRWKKGRLLERSSGDGSGVVQLF-EDLEVVNISLDSVAE 708
BLAST of NO22G01950 vs. NCBI_GenBank
Match: XP_012201421.1 (hypothetical protein SPRG_07249 [Saprolegnia parasitica CBS 223.65] >KDO27972.1 hypothetical protein SPRG_07249 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 0 Query: 197 VGEDAPMLVKNAVPVPKDITDEKARLQYELSLREDDIDSSSNVYKMVPVEEFGAALLRGMGWAGPSADDVQIYQASARPQGLGLGANP 285 VG+DAP+L +N +P +++T+E + ++++S+R DD+D S+ Y+ VP+EEFGAALLRGMGW+G + R Q LGLGA P Sbjct: 112 VGDDAPILFRNKLPGLENLTNENDKFKHDISMRPDDMDIHSDAYEAVPIEEFGAALLRGMGWSGKDRVQPTGSKVQMRHQRLGLGATP 199
BLAST of NO22G01950 vs. NCBI_GenBank
Match: XP_008604161.1 (hypothetical protein SDRG_00461 [Saprolegnia diclina VS20] >EQC42738.1 hypothetical protein SDRG_00461 [Saprolegnia diclina VS20]) HSP 1 Score: 86.3 bits (212), Expect = 4.100e-13 Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = 0 Query: 198 GEDAPMLVKNAVPVPKDITDEKARLQYELSLREDDIDSSSNVYKMVPVEEFGAALLRGMGWAGPSADDVQIYQASARPQGLGLGANP 285 G+DAP+L +N +P +++T+E + ++++S+R DD+D S+ Y+ VP+EEFGAALLRGMGW+G + R Q LGLGA P Sbjct: 113 GDDAPILYRNKLPGLENLTNENDKFKHDISMRPDDMDIYSDAYEAVPIEEFGAALLRGMGWSGKDRVQPTGSKVQMRHQRLGLGATP 199
BLAST of NO22G01950 vs. NCBI_GenBank
Match: XP_002179218.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49041.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.1 bits (209), Expect = 9.000e-13 Identity = 53/128 (41.41%), Postives = 76/128 (59.38%), Query Frame = 0 Query: 545 DPRGTSWLLPHIKVRIITERPLGGREGGKEREKARSFYRAKGVVVDVPRPGEATVHLDEGGRILEGVKARHLETALPPVGGIVLLLRGPHRLQRGKLLEVESGREEGVVQLVDEDLQVVRMPLDDMAE 673 + R W + +I+VRI++ER LG R +++ KG+V DV P TV L G +L+ V R+LETALP VGG ++L G HR +G+LLE +S + V+Q ED+ V +PLDD+AE Sbjct: 351 EERRPKWAISNIRVRIVSER-LGKR-----------YFKEKGIVADV-TPKGLTVEL-ANGTVLDQVPERYLETALPKVGGKAIVLTGSHRFAKGQLLERDSRKAMAVIQFY-EDMHVQSVPLDDVAE 463 The following BLAST results are available for this feature:
BLAST of NO22G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01950 ID=NO22G01950|Name=NO22G01950|organism=Nannochloropsis oceanica|type=gene|length=3403bpback to top protein sequence of NO22G01950.3 >NO22G01950.3-protein ID=NO22G01950.3-protein|Name=NO22G01950.3|organism=Nannochloropsis oceanica|type=polypeptide|length=678bpback to top protein sequence of NO22G01950.2 >NO22G01950.2-protein ID=NO22G01950.2-protein|Name=NO22G01950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=667bpback to top protein sequence of NO22G01950.1 >NO22G01950.1-protein ID=NO22G01950.1-protein|Name=NO22G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=566bpback to top Synonyms
Publications
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