NO22G01640, NO22G01640 (gene) Nannochloropsis oceanica

Overview
NameNO22G01640
Unique NameNO22G01640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1401
Alignment locationchr22:480373..481773 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:480373..481773 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR003140PLipase/COase/thioEstase
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Homology
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: EWM21518.1 (hypothetical protein Naga_100679g2 [Nannochloropsis gaditana])

HSP 1 Score: 338.2 bits (866), Expect = 4.100e-89
Identity = 168/311 (54.02%), Postives = 207/311 (66.56%), Query Frame = 0 
Query:  156 VDLPVLLGLDSGRPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNAPACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAGFSLPPGCQLSQPSSALFVHGTEDDVVPYESSVQVFNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEP-PSSIPFCKRSKNPDPTSLLLPQS------PSSLMSSASSNCTQFTRDFDCDSGKAKGVKDPTFSNYRDSNCGLSGNETVITQYVDCGIGREG 460
            + LP  +GL+SGRPA VLYP        LPLV+VLHAWGSNA+ HA+YLGV++R+ ++ F+ALLPNGI NSKG+RFWNAPACCNRE IAVDDLGYLTDLL EA+ +LP+DP ++++ GHSNGGQMALYL CR    G IRGLVSIAGF  PP C   +P SALF+HGT+D VVP+++S+Q F++                                 P  SS P+C+ SK  DP+S+L P        P S   S +S C+QFTRD DCD   A G KDP  S+YRD+NC L G ETV+TQYV CG G +G
Sbjct:  145 IALPSFIGLESGRPAAVLYPPHAALSPPLPLVVVLHAWGSNASEHAAYLGVSERLSRFQFIALLPNGIKNSKGYRFWNAPACCNREGIAVDDLGYLTDLLQEARDRLPVDPARVYLTGHSNGGQMALYLACRSGGEGHIRGLVSIAGFGPPPACPAPRPCSALFIHGTDDAVVPFDTSLQAFDKWVEGEGCLAESPLSTPPAASLPSSAIGASSPPTPTASSQPYCRLSKPSDPSSMLNPSEFPAPILPFSSPHSPASTCSQFTRDLDCDPSFAVGAKDPRLSSYRDANCALRGEETVVTQYVGCG-GEKG 454
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BLAST of NO22G01640 vs. NCBI_GenBank
Match: WP_088289848.1 (hypothetical protein [Kineosporia sp. A_224])

HSP 1 Score: 130.6 bits (327), Expect = 1.300e-26
Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = 0 
Query:  168 RPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAG--FSLPPGCQLSQPSSALFVHGTEDDVVPYE 332
            RP  +  PS       +PL+L+LH + SN+     Y G+ +R     F+ + PNG ++ +G +FWNA  ACC+  +  VDD GYL  L++   R+ P+DP +I+V+GHSNGG MA  + C  + + R+  +VS+AG   +    C  + P S L VHGT+D++VPYE
Sbjct:   78 RPPDISVPSGGNGRGPMPLLLLLHGYTSNSAEVDLYFGLRERAAAAGFLYVRPNGTVDQRGAQFWNATDACCDLFDTGVDDSGYLLGLIDTLAREYPVDPRQIYVMGHSNGGFMAYRMAC--DHADRVAAVVSVAGAMHAARADCTPAAPVSVLQVHGTDDELVPYE 242
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: WP_095698510.1 (hypothetical protein [Candidatus Planktophila limnetica] >ASY28202.1 polyhydroxybutyrate depolymerase [Candidatus Planktophila limnetica])

HSP 1 Score: 129.0 bits (323), Expect = 3.800e-26
Identity = 62/166 (37.35%), Postives = 96/166 (57.83%), Query Frame = 0 
Query:  168 RPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAG--FSLPPGCQLSQPSSALFVHGTEDDVVPY 331
            RP  ++ PS        PL++ LH + +N  Y  SY  ++    Q   + + P+G  +S G+ FWNA PACCN ++  VDD  YL  +++   +   +DP ++++IGHSNGG MA  + C  N+S RI  +VS+AG  +S P  C+ + P S L +HG+ D V+ Y
Sbjct:   32 RPFTLVLPSNYQAGTPAPLLIALHGYTANTPYADSYFQLSKVADQKGILTVYPSGSKDSNGYLFWNATPACCNFDSSTVDDEAYLLSIIDSVSKDHAVDPARVYIIGHSNGGFMAHRMAC--NQSDRIAAIVSLAGMTYSNPKSCRPTSPVSVLQIHGSNDAVITY 195
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: PKN57482.1 (hypothetical protein CVU56_10805 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14])

HSP 1 Score: 128.6 bits (322), Expect = 4.900e-26
Identity = 69/180 (38.33%), Postives = 98/180 (54.44%), Query Frame = 0 
Query:  159 PVLLGLDSGRPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNAPA--CCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAG--FSLPPGCQLSQPSSALFVHGTEDDVVPYESSV 335
            P  LG D  RPA V YP+        PLV++LH +G++      YLG         +VA++P G ++  G +FWNA    CCN    AVDD GYL  L+ +A  +LP+DP ++++ GHSNGG MA  + C  + +  + G+ S+AG     P  C  S P + L +HGT DD + Y   V
Sbjct:   78 PATLGGD--RPASVYYPADYGGGRTWPLVILLHGYGASGLIEDYYLGFHAAATAAGYVAVVPEGTVDGSGKQFWNADPSWCCNFGQSAVDDEGYLLGLVADAAAQLPVDPARVYLFGHSNGGFMAHRVAC--DHADVVAGVASLAGSLALAPADCAPSGPVTVLQIHGTLDDTIRYSGEV 253
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: AIA16207.1 (Phospholipase/Carboxylesterase [uncultured bacterium])

HSP 1 Score: 127.1 bits (318), Expect = 1.400e-25
Identity = 64/168 (38.10%), Postives = 95/168 (56.55%), Query Frame = 0 
Query:  168 RPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAG--FSLPPGCQLSQPSSALFVHGTEDDVVPYES 333
            RPA +  P +      LPLVL+LH  G+        LG++     + ++ L+P G + S G  FWNA P CC+ +N  +DD GYL +L+ E      +D  ++++ GHSNGG MA  L C  N  G  +G+VS+AG  F+ P  C+   P + L VHG ED +VP+++
Sbjct:   64 RPATLKLPKQYDGKKKLPLVLMLHGRGNTPEIADILLGLSRAQDAHGYLLLMPKGKVRSDGQTFWNATPECCDTDNTGIDDSGYLQNLVRETIANYNVDESRVYIYGHSNGGFMAYRLACDTN--GLFKGVVSLAGSVFAEPSLCKTETPINILQVHGDEDSIVPFDT 229
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: AIA16541.1 (Phospholipase/Carboxylesterase [uncultured bacterium])

HSP 1 Score: 127.1 bits (318), Expect = 1.400e-25
Identity = 64/168 (38.10%), Postives = 95/168 (56.55%), Query Frame = 0 
Query:  168 RPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAG--FSLPPGCQLSQPSSALFVHGTEDDVVPYES 333
            RPA +  P +      LPLVL+LH  G+        LG++     + ++ L+P G + S G  FWNA P CC+ +N  +DD GYL +L+ E      +D  ++++ GHSNGG MA  L C  N  G  +G+VS+AG  F+ P  C+   P + L VHG ED +VP+++
Sbjct:   64 RPATLKLPKQYDGKKKLPLVLMLHGRGNTPEIADILLGLSRAQDAHGYLLLMPKGKVRSDGQTFWNATPECCDTDNTGIDDSGYLQNLVRETIANYNVDESRVYIYGHSNGGFMAYRLACDTN--GLFKGVVSLAGSVFAEPSLCKTETPINILQVHGDEDSIVPFDT 229
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: AKF09709.1 (Putative LIPOPROTEIN LPQP [Sandaracinus amylolyticus])

HSP 1 Score: 125.9 bits (315), Expect = 3.200e-25
Identity = 68/198 (34.34%), Postives = 107/198 (54.04%), Query Frame = 0 
Query:  134 DAPSGNSGTVDSSSINSEATHHVDLPVLLGLDSGRPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAGFSLPPGCQLSQPSSALFVHGTEDDVVPY 331
            +  S +S   D+S+   +A      P  +G  + RPA+++ P        LPLV++LH + ++A    +Y   T   +   F  LLPNG  +S+G RFWNA  ACC+ +   VDD+ YLT LL+EA+  +P+D  +++ IGHSNG  M+  + C  ++     G ++ A F     C+ + P S L VHG  D+ V +
Sbjct:   11 EGSSDDSMVDDASTATPDAGAPTGPPSEIG-PAERPARLVVPDAHDGTTPLPLVVLLHGYSASAPLQDTYWRATQAARSMGFYLLLPNGTTDSRGNRFWNATTACCDFDMTGVDDVAYLTSLLDEAESVVPVDTSRVYFIGHSNGSYMSFRMACELSDRVAAIGGLAGADFLNDTDCEPAHPVSVLHVHGDADETVSF 207
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: WP_053236735.1 (hypothetical protein [Sandaracinus amylolyticus])

HSP 1 Score: 125.9 bits (315), Expect = 3.200e-25
Identity = 68/198 (34.34%), Postives = 107/198 (54.04%), Query Frame = 0 
Query:  134 DAPSGNSGTVDSSSINSEATHHVDLPVLLGLDSGRPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAGFSLPPGCQLSQPSSALFVHGTEDDVVPY 331
            +  S +S   D+S+   +A      P  +G  + RPA+++ P        LPLV++LH + ++A    +Y   T   +   F  LLPNG  +S+G RFWNA  ACC+ +   VDD+ YLT LL+EA+  +P+D  +++ IGHSNG  M+  + C  ++     G ++ A F     C+ + P S L VHG  D+ V +
Sbjct:   20 EGSSDDSMVDDASTATPDAGAPTGPPSEIG-PAERPARLVVPDAHDGTTPLPLVVLLHGYSASAPLQDTYWRATQAARSMGFYLLLPNGTTDSRGNRFWNATTACCDFDMTGVDDVAYLTSLLDEAESVVPVDTSRVYFIGHSNGSYMSFRMACELSDRVAAIGGLAGADFLNDTDCEPAHPVSVLHVHGDADETVSF 216
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: WP_088318722.1 (hypothetical protein [Kineosporia sp. R_H_3])

HSP 1 Score: 125.6 bits (314), Expect = 4.200e-25
Identity = 62/151 (41.06%), Postives = 94/151 (62.25%), Query Frame = 0 
Query:  184 LPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAG--FSLPPGCQLSQPSSALFVHGTEDDVVPYE 332
            +PL+L+LH + SN+     Y G+ +R      + + PNG ++ +G +FWNA  ACC+  +  VDD GYL  L++   R+ PIDP +I+V+GHSNGG MA  + C  + + R+  +VS+AG   +    C  + P S L VHGT+D++VPYE
Sbjct:   90 MPLLLLLHGYTSNSAEVDLYFGLRERAAAAGILYVRPNGTVDGRGAQFWNATDACCDLFDTGVDDSGYLLGLIDTLAREYPIDPRRIYVMGHSNGGFMAYRMAC--DHADRVAAVVSVAGAMHADRADCTPAAPVSVLQVHGTDDELVPYE 238
[Close]
BLAST of NO22G01640 vs. NCBI_GenBank
Match: PCJ12467.1 (hypothetical protein COB10_07170 [Planctomycetes bacterium])

HSP 1 Score: 125.2 bits (313), Expect = 5.400e-25
Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 0 
Query:  164 LDSGR-PAKVLYPSRIPHDHNLPLVLVLHAWGSNATYHASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNA-PACCNRENIAVDDLGYLTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSIAGFSL--PPGCQLSQPSSALFVHGTEDDVVPY 331
            +D+GR P  V  PS     +  PL+L+LH +        +Y       +Q  F+   P+G  +S GF+FWNA  ACC+  N  VDDLGYLT LL+  + +  IDP++I ++GHSNGG MA  + C   +  R   +VS++G +L  P  C  + P   L +HGT D ++ Y
Sbjct:   38 VDAGRGPVVVQIPSNYEPSNPAPLLLLLHGYSFTGQMMENYFDXAPLAEQNGFIFTYPDGTQDSLGFQFWNATSACCDNNNSGVDDLGYLTTLLDLLESQYNIDPQRIHIVGHSNGGFMAHRMAC--EDGTRFASIVSLSGAALDDPAQCAPASPMHVLHIHGTLDPIILY 206
The following BLAST results are available for this feature:
BLAST of NO22G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21518.14.100e-8954.02hypothetical protein Naga_100679g2 [Nannochloropsi... [more]
WP_088289848.11.300e-2639.52hypothetical protein [Kineosporia sp. A_224][more]
WP_095698510.13.800e-2637.35hypothetical protein [Candidatus Planktophila limn... [more]
PKN57482.14.900e-2638.33hypothetical protein CVU56_10805 [Deltaproteobacte... [more]
AIA16207.11.400e-2538.10Phospholipase/Carboxylesterase [uncultured bacteri... [more]
AIA16541.11.400e-2538.10Phospholipase/Carboxylesterase [uncultured bacteri... [more]
AKF09709.13.200e-2534.34Putative LIPOPROTEIN LPQP [Sandaracinus amylolytic... [more]
WP_053236735.13.200e-2534.34hypothetical protein [Sandaracinus amylolyticus][more]
WP_088318722.14.200e-2541.06hypothetical protein [Kineosporia sp. R_H_3][more]
PCJ12467.15.400e-2538.01hypothetical protein COB10_07170 [Planctomycetes b... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004095NSK004095Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01640.1NO22G01640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|567302gene_7175Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100679g2gene8910Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01640.1NO22G01640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01640 ID=NO22G01640|Name=NO22G01640|organism=Nannochloropsis oceanica|type=gene|length=1401bp
ATGGCCCGCTCCCGCGTCCCCTCCATTTCATCCTCCACCTCCACCTCGTG
GCTTATAGCATGCCTGGCCCTGGGCCTCCTCGTACGACTCGACAGTACCA
GCAGCATCAGCAGTACCGCCCCAGAGGTTGACGCAGACAAGACCTCAGGA
TCGAGCGGGCCCTTCCCCTCAAGCTACTCTCCGCCTTCTCCCCGTTTTTT
GCTGCGACAGCAACGACAACGCCAACTACAACAACCAGTTCAAACAGACG
CGCAGACCGACCTTTCACCTTCAATCCCCGTCTCAGTGGCCCTAGGAGGC
AATGCTGCGTCATCACCTTCCATGTCCTCCCCATTCTCCTCCCTCAAGAA
CACCACGATCACTACCACGAGTGATCCTCCTGCTAACACAAATCCCACTG
ACGCTCCGAGCGGAAACAGCGGCACTGTGGATAGCAGCAGCATAAACAGC
GAGGCCACGCACCATGTGGACCTCCCCGTCTTACTCGGCCTCGACAGCGG
CCGCCCCGCAAAAGTTCTGTACCCCTCCCGCATCCCCCATGACCATAACC
TGCCCCTCGTCCTGGTCCTCCACGCTTGGGGAAGCAATGCCACCTATCAC
GCATCCTATCTCGGAGTGACTGATCGAGTGCAACAATATAATTTCGTTGC
CCTTCTTCCCAACGGGATCCTAAATTCTAAAGGTTTCCGGTTCTGGAACG
CCCCTGCTTGTTGCAACCGTGAGAATATCGCCGTCGATGACCTCGGGTAC
CTCACTGATCTCCTTAACGAGGCCAAGCGAAAGCTACCCATCGATCCTGA
AAAAATCTTTGTCATCGGTCACTCGAATGGGGGGCAGATGGCTCTTTACC
TCACCTGTCGCTACAATGAATCGGGGCGCATCCGAGGCCTTGTCTCCATC
GCGGGCTTCAGCCTCCCCCCTGGGTGTCAGCTGTCCCAACCTTCTTCTGC
CTTATTCGTGCATGGGACAGAGGATGACGTAGTACCCTACGAGTCAAGTG
TCCAGGTTTTCAACCAGTGGGTGGAACGCCAAAACTGCCTTCCCGAGCGA
AACCCTGTGCTCCCTTCCTCCTCCACCGTGTCGGCCTCGGCGTCGTCCAT
AGGTGCCTCGCGAGAGCCTCCTTCCTCTATCCCCTTTTGTAAGCGCAGTA
AGAACCCGGATCCTACATCATTGCTCTTGCCTCAGTCGCCTTCCTCCCTC
ATGTCCTCCGCTTCTTCCAACTGCACTCAATTTACCCGCGACTTCGACTG
CGACTCGGGCAAGGCAAAAGGGGTCAAGGACCCTACCTTTTCTAATTACC
GTGACAGCAATTGTGGCTTAAGCGGGAATGAAACGGTCATCACGCAGTAC
GTTGATTGTGGTATTGGGAGGGAGGGGGGGGGGAAGGAGGTGCGAATGTG
A
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protein sequence of NO22G01640.1

>NO22G01640.1-protein ID=NO22G01640.1-protein|Name=NO22G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MARSRVPSISSSTSTSWLIACLALGLLVRLDSTSSISSTAPEVDADKTSG
SSGPFPSSYSPPSPRFLLRQQRQRQLQQPVQTDAQTDLSPSIPVSVALGG
NAASSPSMSSPFSSLKNTTITTTSDPPANTNPTDAPSGNSGTVDSSSINS
EATHHVDLPVLLGLDSGRPAKVLYPSRIPHDHNLPLVLVLHAWGSNATYH
ASYLGVTDRVQQYNFVALLPNGILNSKGFRFWNAPACCNRENIAVDDLGY
LTDLLNEAKRKLPIDPEKIFVIGHSNGGQMALYLTCRYNESGRIRGLVSI
AGFSLPPGCQLSQPSSALFVHGTEDDVVPYESSVQVFNQWVERQNCLPER
NPVLPSSSTVSASASSIGASREPPSSIPFCKRSKNPDPTSLLLPQSPSSL
MSSASSNCTQFTRDFDCDSGKAKGVKDPTFSNYRDSNCGLSGNETVITQY
VDCGIGREGGGKEVRM*
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Synonyms
Publications