NO22G01510, NO22G01510 (gene) Nannochloropsis oceanica

Overview
NameNO22G01510
Unique NameNO22G01510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4218
Alignment locationchr22:445687..449904 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:445687..449904 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO22G01510 vs. NCBI_GenBank
Match: EWM21489.1 (hypothetical protein Naga_100019g71 [Nannochloropsis gaditana])

HSP 1 Score: 127.5 bits (319), Expect = 6.100e-26
Identity = 104/269 (38.66%), Postives = 132/269 (49.07%), Query Frame = 0 
Query:    1 MDP--SGSSRAKQRNLKNPLLLDEKLSYVVPPSAPPAPFYDADHHHYQYPPVPLADGEPILATVLAPSNR----TNTTDRTNWTAVTDPGVQAEITRSLSLDPRPQEIPSSGVSGMISRCDEGPPSSSSSAGSTFVHSADRLAALRSVEERLRVREAERQGCRRNALDHASLRAAXXXXXXXXXXXXXXXXXXXXGIDE-DGLQVDPSLQDGVPSLSEILASRQKKKEG---EGGREGGQKHKPGDYQVAEYKIEEGYQISEYRSIYDS 260
            MDP  S  S     +LK+PLLLD +    + PSAPPAP    D     YPP+P  D     +  L+PS+R      T+D   W     P  + E   S +   R Q +PS+  +   +     P  SS    S F+  A  LA  R  EE LR  EA RQG +RN LDHA+LRAA                    G++E +GLQVDPS  DG P L+E+L +  KK+EG                  ++AEY I+EGYQISEYRSIYDS
Sbjct:    1 MDPPRSSDSVRSSHSLKSPLLLDHRAPQAISPSAPPAPSVSEDSPQRLYPPMPEPD-----SPFLSPSSRFLAADATSDGARWAGAPAPSWRTETAGSPA--HRLQNVPSAPSASAGNTRSHDPAISSLRPSSEFLRQAQALAMRRVTEENLRAEEASRQGWQRNVLDHATLRAA---------EAAAAARRSRPGLEESEGLQVDPSTHDGAPCLTELLEA-GKKREGXXXXXXXXXXXXXXXXXXKMAEYDIKEGYQISEYRSIYDS 252
[Close]
BLAST of NO22G01510 vs. NCBI_GenBank
Match: EWM21488.1 (hypothetical protein Naga_100019g71 [Nannochloropsis gaditana])

HSP 1 Score: 127.1 bits (318), Expect = 8.000e-26
Identity = 104/267 (38.95%), Postives = 132/267 (49.44%), Query Frame = 0 
Query:    1 MDPSGSSRAKQRNLKNPLLLDEKLSYVVPPSAPPAPFYDADHHHYQYPPVPLADGEPILATVLAPSNR----TNTTDRTNWTAVTDPGVQAEITRSLSLDPRPQEIPSSGVSGMISRCDEGPPSSSSSAGSTFVHSADRLAALRSVEERLRVREAERQGCRRNALDHASLRAAXXXXXXXXXXXXXXXXXXXXGIDE-DGLQVDPSLQDGVPSLSEILASRQKKKEG---EGGREGGQKHKPGDYQVAEYKIEEGYQISEYRSIYDS 260
            MDP  SS     +LK+PLLLD +    + PSAPPAP    D     YPP+P  D     +  L+PS+R      T+D   W     P  + E   S +   R Q +PS+  +   +     P  SS    S F+  A  LA  R  EE LR  EA RQG +RN LDHA+LRAA                    G++E +GLQVDPS  DG P L+E+L +  KK+EG                  ++AEY I+EGYQISEYRSIYDS
Sbjct:    1 MDPPRSS--DSHSLKSPLLLDHRAPQAISPSAPPAPSVSEDSPQRLYPPMPEPD-----SPFLSPSSRFLAADATSDGARWAGAPAPSWRTETAGSPA--HRLQNVPSAPSASAGNTRSHDPAISSLRPSSEFLRQAQALAMRRVTEENLRAEEASRQGWQRNVLDHATLRAA---------EAAAAARRSRPGLEESEGLQVDPSTHDGAPCLTELLEA-GKKREGXXXXXXXXXXXXXXXXXXKMAEYDIKEGYQISEYRSIYDS 248
The following BLAST results are available for this feature:
BLAST of NO22G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM21489.16.100e-2638.66hypothetical protein Naga_100019g71 [Nannochlorops... [more]
EWM21488.18.000e-2638.95hypothetical protein Naga_100019g71 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004110NSK004110Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01510.2NO22G01510.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO22G01510.1NO22G01510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|650516gene_7162Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g71gene8924Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01510.2NO22G01510.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO22G01510.1NO22G01510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01510 ID=NO22G01510|Name=NO22G01510|organism=Nannochloropsis oceanica|type=gene|length=4218bp
CTCAGTACTGCCCGTGCAGATCTGGTGGGTTATGTGTGGGAAGAGAGTGG
GTCGGGGGCGTAAGGACACGAGGCGTGACTGACGGCGGGGGTTTAAGGGT
TATGGCCATGGGTCGCTCAACTAGGATGACGGATATGTGTCATCGAGCAG
CCCCTGAGTCTGTGGGGTCGTCAACCGTTCATGCCGTCCACCGCCCGAGA
GAAAGAGATTTCTTAAGCTACGCGGCATCTTGTGATGGGCGTGCGTAAAA
ACCGCACGCGGGGCAAGTATAAGCGATTCACTAAGCAACTCTGCTGGCTT
TTTGTTCGTAGCCACCTTCCTTCGGGTCGGCGAACCTCAACTGCAACACG
AGGCAACAAGCAAGGGAAGCAAATTCAGCGGGTAGACTTTACACAAAATT
ATAAAATAAGCCAAAACAGTTTTATACAGCATTAGGAAGCAGTTTGAGCT
CGATCAGAACCACTCGGTTTCGTCGTATTTTTGTTTTCACACGATGATTT
GGTTGATCTCCGCAACCACGCCATTTCACCCTTACCAGCCGTACTTCCCC
TGCGTCTGCGCCTTGCTCTGCATGCCTCTCGCCTTCCCCTCCAGCAAATC
CGCTTCTCGTTCTGCGGCCTGAATGGCAAGGCTATTGATCTGATGCTTCC
GCTTGTGGGTCTTGCTTGCTTCCGTGGTGGTGATGGTTTCCCCTGTCTTG
GTGTCGTAAAACATGGCGGCAATAGACACCTTCTCCTTCTTCTTGGGCGG
GCCATGTCGAAATGGATCCCAGGCCTCGTCTCTGGCCGCCACCTCCATAA
CTTGCCCTCCTGCTAGCTGACTAACGGCGGAGAGGTTCCCTGCTGCGAGC
TCTCTCTTCTGCCGTTGCTTTTGCCGGCGGGATTCAGCCCCGGTGAGGGG
TTGTCCGAACTCATCAAGCTCGTCTTGTTCTTCATGCTGTTGGTGCTGGA
TGGGAGGATAGTATTGTTGCTGTTGTTGCTGTGGTTGTTGTTGCGCTTGG
GCGGCGTAATAAGCATCCCATGCCGCCTGGTATTCCCCCCCTCCTCCTCC
TCCTGCTCCTCCTCCTGCTCCTCCTCCTGCTCCTTCTCCCCCTTGTTGTT
GCCGCCCGGCATGTACGTTGTGTACATTACCTCCTCTTCCTGTTGCTGGT
GCTGGTGCTGATGCTGCTGCTGTTGCTGTTGTTGTTGTTCTTGTTGTTGT
TGTGTGCGTGTGTGCGTGGTTGTAGTAGGGTGCCGTGCTCGTCGTGGTCG
AGGTCACCGAAAAAGAAGACGGATGATGAACAGAAGAGAATTGTGCACTC
TCTGCCCCTGCTGAATCTGCAGCTGCTGTCGGTATCGCTGCAGGTGCTGC
CATTGTAGGAGAGATGCCAGGCACATCTTTCTTGACTATCGTTACGCGTG
GTAGAGCAGCGGCTTTAGCGCTTGCCATGAGGGAGGGATGCAGCGGCCCA
GACCCATTTTCTCCCCTTCCTTCGTCCTCGTCCTCATCCTCGTCCTCCCC
ACTGTCTTCACTCTCAGCTGCCACTGCTGCTGCCTCCACTGCTGCTGCTG
CTGCTGCTGCTTCTTTTATATCTTTTACCTTCTTCCTTTCGGCAGCGGCT
TTGTTGCTTTTGACGAGAGCCAGATCTAGAGCTTCTTCGGCTTTGGGTTT
GGGCAGGAGGGCGAACAAGCCCGTCGCACCAGCGGCTTGACGAGAAACGA
TGGCTTTGCTCTCGGCGACTTGAGCTCGGATCTTGCGGCGGCGTTCTCGC
TCCTGAGTTTGGAAGGAGAAGGGGCTCGTGAGAGTGTTGGAAGGGGTTGA
CAAGAAGTCGAGAGGTCAAAAAAGGGAGAGCCAAGAGATCCATGTTCTCA
CTACACCACGGCTGCCGTTCACGCACCTCATCATCCAGCTCTTCCTCCTC
CCCAGCCCCATCTAGATCGTCGTCGTCCTCGTCCTCGTCTCCGTCGTCAT
CACTTAAAAACCTCCCCCCCGTGACCCCCTTGCTGCTATCCCTGGCCCTT
CGCAAAGGCACCGCCCGCATCAATGCTGCTTGTATATGCGCCGGCAAAAT
GGAAAGTGCGACCTTAGCCTTTTTCTTCTTAGGCTTTTTGTCCTTCTTCT
TGTGTTTCTTGCCATCGGTGGCGGTCTCGGGAAGGAGAGCATGGGAGGAG
GCCGAGGAGAAGGGCGGGGGAGGCGGGGCGGAAGACTGCTGTTGCTGCTG
GTTGCCCTCCGCGTCCGAGTCGCTGCCATAGTCCACACCCAGCAAGGACA
TAGTTACTGCCTACCTGTGGTATTGTAGCGATAGAGTGGATAAATGAGCA
TTTGTGGGTAATGTACAGAGCGAGTACCTGAGCAGCCAGATCACGTGATA
AAGGAAGCCCCCCCTTGCATGATCTTATAACTCGGTTGACGTATTGACGT
TGCAGCGAAGGCGAGGGCATCATCACAGGGCTTGCATGGCTGACCTTTCC
TGCTACGCGTGGTTATGTGGTTGCGCCCTGGATTTACACTTTTTGCGATT
GTTGTTTGGGAATCGGGCAGTGGAAGGGGCCATTTCGTGGGGAGGCGACG
TGTATATTTGATATTTCCCCAAATGAGCAACAAGCCCTACCTACACCCAC
ATACTCACAGACAGACATCACTTACACCCTAACCCCGTCATCGGGCTCGT
GGTTTACGGTATGGATCCATCCGGGTCCTCCCGTGCAAAGgtaagacatt
gtcttcccctcgacattgtcttcccctcccctctctccattccaccttca
tccctcatctttccgcctctgttttattctggcaagcgatctcacctaca
caccgtcaccacaccaacacaccaacacaccaacctacagCAGCGCAACC
TCAAGAATCCATTGCTCCTCGACGAAAAGCTGTCGTACGTCGTGCCGCCC
TCAGCGCCACCGGCCCCGTTTTACGATGCCGATCATCACCACTACCAGTA
CCCTCCAGTCCCTTTGGCCGACGGGGAGCCCATCCTCGCCACTGTCCTTG
CTCCCAGCAACAGGACCAACACGACTGACCGCACAAACTGGACGGCTGTG
ACCGATCCAGGGGTGCAAGCGGAGATTACGCGTTCACTTTCACTGGACCC
AAGGCCACAAGAGATTCCCTCCTCAGGCGTGAGCGGGATGATTAGTAGAT
GCGACGAGGGACCTCCTTCTTCCTCTTCCTCTGCCGGCAGTACGTTTGTG
CATAGCGCTGACAGGTTGGCGGCCTTGCGAAGTGTAGAGGAGCGCTTGCG
GGTGCGCGAGGCGGAAAGGCAGGGGTGCCGACGTAATGCGTTGGATCATG
CTTCGTTACGAGCTGCGGAAGCAGCAGCAGCTGCACGCCGACGAGGAGGT
GGAGGAGGGAAAGGCAGAGGACGAGGAGGGATTGACGAGGATGGGTTGCA
GGTTGATCCGTCTCTGCAAGATGGTGTGCCTTCGCTCTCGGAGATCCTGG
CGTCTCGACAGAAGAAAAAGGAGGGGGAGGGAGGGAGGGAGGGAGGGCAG
AAGCACAAGCCCGGGGATTACCAGGTGGCCGAGTACAAGATTGAAGAGGG
GTACCAGATAAGTGAGTACAGGAGCATATACGACTCATGAGGGTGGGAGG
GAAGGGAAGGAGGAGGAAGAGCCATGTTGATTTACGTTTGGATGTAAAGA
GTGTGACAGGAGGGAGAATGAATAAGAAAGGAAGAAAGTGTTTAAATTTA
TCTTACTTTGACGACGCGAATGCTCCACCATTCTGTCTCTTCCCTCGTTT
CTTCTGCGCATTGATCTGTCTTGATGTCTATGCATCATTTTCTAGGCATC
AATGGTCCCCACGACGACCACCCCCTTAGGGACTTTATGCACTTGGACCT
TCACCGAGAGAGAACAAACCCTTTCAACCGGTGCTACTGCCCTCCATGCC
TCACAAAAGCAACCACCCTCAAAGTCGGCGCGTGTCTGACTGGCCTGGGG
CGTCGAGGCTCGAAGAGGGGGTCCCAGAGGAATATGAATTCCTACGGTTC
ACTGGCCGAGCTTGCAGCACGCGGGACGCCCAGGTCGATCGAGAGAGCTT
GACTGGAACACACGGCCTACGTCACGCCTGTGCACGATTATATGAAGGGC
GTTGAGGGGCGCGGAGAGGGGCAAGCGCGAGAAGGGAGGGCGGTGTTTTC
GTGGAAGAGGACATAGAGAGGAGGAAACGAATCAGGAGCGAGGAAACATC
GAAAAGAAAAGGTACAGA
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protein sequence of NO22G01510.2

>NO22G01510.2-protein ID=NO22G01510.2-protein|Name=NO22G01510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=260bp
MDPSGSSRAKQRNLKNPLLLDEKLSYVVPPSAPPAPFYDADHHHYQYPPV
PLADGEPILATVLAPSNRTNTTDRTNWTAVTDPGVQAEITRSLSLDPRPQ
EIPSSGVSGMISRCDEGPPSSSSSAGSTFVHSADRLAALRSVEERLRVRE
AERQGCRRNALDHASLRAAEAAAAARRRGGGGGKGRGRGGIDEDGLQVDP
SLQDGVPSLSEILASRQKKKEGEGGREGGQKHKPGDYQVAEYKIEEGYQI
SEYRSIYDS*
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protein sequence of NO22G01510.1

>NO22G01510.1-protein ID=NO22G01510.1-protein|Name=NO22G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MDPSGSSRAKQRNLKNPLLLDEKLSYVVPPSAPPAPFYDADHHHYQYPPV
PLADGEPILATVLAPSNRTNTTDRTNWTAVTDPGVQAEITRSLSLDPRPQ
EIPSSGVSGMISRCDEGPPSSSSSAGSTFVHSADRLAALRSVEERLRVRE
AERQGCRRNALDHASLRAAEAAAAARRRGGGGGKGRGRGGIDEDGLQVDP
SLQDGVPSLSEILASRQKKKEGEGGREGGQKHKPGDYQVAEYKIEEGYQI
SINGPHDDHPLRDFMHLDLHRERTNPFNRCYCPPCLTKATTLKVGACLTG
LGRRGSKRGSQRNMNSYGSLAELAARGTPRSIERA*
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Synonyms
Publications