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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr22 | genome | chr22:445687..449904 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO22G01510.2 vs.
Match: EWM21489.1 (hypothetical protein Naga_100019g71 [Nannochloropsis gaditana]) HSP 1 Score: 161.4 bits (407), Expect = 3.800e-36 Identity = 120/269 (44.61%), Postives = 154/269 (57.25%), Query Frame = 0
Query: 1 MDPSGSSRA--KQRNLKNPLLLDEKLSYVVPPSAPPAPFYDADHHHYQYPPVPLADGEPILATVLAPSNR----TNTTDRTNWTAVTDPGVQAEITRSLSLDPRPQEIPSSGVSGMISRCDEGPPSSSSSAGSTFVHSADRLAALRSVEERLRVREAERQGCRRNALDHASLRAAEAAAAARRRGGGGGKGRGRGGIDE-DGLQVDPSLQDGVPSLSEILASRQKKKEG-EGGREGGQK--HKPGDYQVAEYKIEEGYQISEYRSIYDS 260
MDP SS + +LK+PLLLD + + PSAPPAP D YPP+P D + L+PS+R T+D W P + E S + R Q +PS+ + + P SS S F+ A LA R EE LR EA RQG +RN LDHA+LRAAEAAAAAR R R G++E +GLQVDPS DG P L+E+L + +K++ G EGGR+GG++ H G Y++AEY I+EGYQISEYRSIYDS
Sbjct: 1 MDPPRSSDSVRSSHSLKSPLLLDHRAPQAISPSAPPAPSVSEDSPQRLYPPMPEPD-----SPFLSPSSRFLAADATSDGARWAGAPAPSWRTETAGSPA--HRLQNVPSAPSASAGNTRSHDPAISSLRPSSEFLRQAQALAMRRVTEENLRAEEASRQGWQRNVLDHATLRAAEAAAAAR---------RSRPGLEESEGLQVDPSTHDGAPCLTELLEAGKKREGGREGGRDGGKEGGHHDG-YKMAEYDIKEGYQISEYRSIYDS 252
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G01510.2 ID=NO22G01510.2|Name=NO22G01510.2|organism=Nannochloropsis oceanica|type=mRNA|length=4068bp
CTCAGTACTGCCCGTGCAGATCTGGTGGGTTATGTGTGGGAAGAGAGTGG
GTCGGGGGCGTAAGGACACGAGGCGTGACTGACGGCGGGGGTTTAAGGGT
TATGGCCATGGGTCGCTCAACTAGGATGACGGATATGTGTCATCGAGCAG
CCCCTGAGTCTGTGGGGTCGTCAACCGTTCATGCCGTCCACCGCCCGAGA
GAAAGAGATTTCTTAAGCTACGCGGCATCTTGTGATGGGCGTGCGTAAAA
ACCGCACGCGGGGCAAGTATAAGCGATTCACTAAGCAACTCTGCTGGCTT
TTTGTTCGTAGCCACCTTCCTTCGGGTCGGCGAACCTCAACTGCAACACG
AGGCAACAAGCAAGGGAAGCAAATTCAGCGGGTAGACTTTACACAAAATT
ATAAAATAAGCCAAAACAGTTTTATACAGCATTAGGAAGCAGTTTGAGCT
CGATCAGAACCACTCGGTTTCGTCGTATTTTTGTTTTCACACGATGATTT
GGTTGATCTCCGCAACCACGCCATTTCACCCTTACCAGCCGTACTTCCCC
TGCGTCTGCGCCTTGCTCTGCATGCCTCTCGCCTTCCCCTCCAGCAAATC
CGCTTCTCGTTCTGCGGCCTGAATGGCAAGGCTATTGATCTGATGCTTCC
GCTTGTGGGTCTTGCTTGCTTCCGTGGTGGTGATGGTTTCCCCTGTCTTG
GTGTCGTAAAACATGGCGGCAATAGACACCTTCTCCTTCTTCTTGGGCGG
GCCATGTCGAAATGGATCCCAGGCCTCGTCTCTGGCCGCCACCTCCATAA
CTTGCCCTCCTGCTAGCTGACTAACGGCGGAGAGGTTCCCTGCTGCGAGC
TCTCTCTTCTGCCGTTGCTTTTGCCGGCGGGATTCAGCCCCGGTGAGGGG
TTGTCCGAACTCATCAAGCTCGTCTTGTTCTTCATGCTGTTGGTGCTGGA
TGGGAGGATAGTATTGTTGCTGTTGTTGCTGTGGTTGTTGTTGCGCTTGG
GCGGCGTAATAAGCATCCCATGCCGCCTGGTATTCCCCCCCTCCTCCTCC
TCCTGCTCCTCCTCCTGCTCCTCCTCCTGCTCCTTCTCCCCCTTGTTGTT
GCCGCCCGGCATGTACGTTGTGTACATTACCTCCTCTTCCTGTTGCTGGT
GCTGGTGCTGATGCTGCTGCTGTTGCTGTTGTTGTTGTTCTTGTTGTTGT
TGTGTGCGTGTGTGCGTGGTTGTAGTAGGGTGCCGTGCTCGTCGTGGTCG
AGGTCACCGAAAAAGAAGACGGATGATGAACAGAAGAGAATTGTGCACTC
TCTGCCCCTGCTGAATCTGCAGCTGCTGTCGGTATCGCTGCAGGTGCTGC
CATTGTAGGAGAGATGCCAGGCACATCTTTCTTGACTATCGTTACGCGTG
GTAGAGCAGCGGCTTTAGCGCTTGCCATGAGGGAGGGATGCAGCGGCCCA
GACCCATTTTCTCCCCTTCCTTCGTCCTCGTCCTCATCCTCGTCCTCCCC
ACTGTCTTCACTCTCAGCTGCCACTGCTGCTGCCTCCACTGCTGCTGCTG
CTGCTGCTGCTTCTTTTATATCTTTTACCTTCTTCCTTTCGGCAGCGGCT
TTGTTGCTTTTGACGAGAGCCAGATCTAGAGCTTCTTCGGCTTTGGGTTT
GGGCAGGAGGGCGAACAAGCCCGTCGCACCAGCGGCTTGACGAGAAACGA
TGGCTTTGCTCTCGGCGACTTGAGCTCGGATCTTGCGGCGGCGTTCTCGC
TCCTGAGTTTGGAAGGAGAAGGGGCTCGTGAGAGTGTTGGAAGGGGTTGA
CAAGAAGTCGAGAGGTCAAAAAAGGGAGAGCCAAGAGATCCATGTTCTCA
CTACACCACGGCTGCCGTTCACGCACCTCATCATCCAGCTCTTCCTCCTC
CCCAGCCCCATCTAGATCGTCGTCGTCCTCGTCCTCGTCTCCGTCGTCAT
CACTTAAAAACCTCCCCCCCGTGACCCCCTTGCTGCTATCCCTGGCCCTT
CGCAAAGGCACCGCCCGCATCAATGCTGCTTGTATATGCGCCGGCAAAAT
GGAAAGTGCGACCTTAGCCTTTTTCTTCTTAGGCTTTTTGTCCTTCTTCT
TGTGTTTCTTGCCATCGGTGGCGGTCTCGGGAAGGAGAGCATGGGAGGAG
GCCGAGGAGAAGGGCGGGGGAGGCGGGGCGGAAGACTGCTGTTGCTGCTG
GTTGCCCTCCGCGTCCGAGTCGCTGCCATAGTCCACACCCAGCAAGGACA
TAGTTACTGCCTACCTGTGGTATTGTAGCGATAGAGTGGATAAATGAGCA
TTTGTGGGTAATGTACAGAGCGAGTACCTGAGCAGCCAGATCACGTGATA
AAGGAAGCCCCCCCTTGCATGATCTTATAACTCGGTTGACGTATTGACGT
TGCAGCGAAGGCGAGGGCATCATCACAGGGCTTGCATGGCTGACCTTTCC
TGCTACGCGTGGTTATGTGGTTGCGCCCTGGATTTACACTTTTTGCGATT
GTTGTTTGGGAATCGGGCAGTGGAAGGGGCCATTTCGTGGGGAGGCGACG
TGTATATTTGATATTTCCCCAAATGAGCAACAAGCCCTACCTACACCCAC
ATACTCACAGACAGACATCACTTACACCCTAACCCCGTCATCGGGCTCGT
GGTTTACGGTATGGATCCATCCGGGTCCTCCCGTGCAAAGCAGCGCAACC
TCAAGAATCCATTGCTCCTCGACGAAAAGCTGTCGTACGTCGTGCCGCCC
TCAGCGCCACCGGCCCCGTTTTACGATGCCGATCATCACCACTACCAGTA
CCCTCCAGTCCCTTTGGCCGACGGGGAGCCCATCCTCGCCACTGTCCTTG
CTCCCAGCAACAGGACCAACACGACTGACCGCACAAACTGGACGGCTGTG
ACCGATCCAGGGGTGCAAGCGGAGATTACGCGTTCACTTTCACTGGACCC
AAGGCCACAAGAGATTCCCTCCTCAGGCGTGAGCGGGATGATTAGTAGAT
GCGACGAGGGACCTCCTTCTTCCTCTTCCTCTGCCGGCAGTACGTTTGTG
CATAGCGCTGACAGGTTGGCGGCCTTGCGAAGTGTAGAGGAGCGCTTGCG
GGTGCGCGAGGCGGAAAGGCAGGGGTGCCGACGTAATGCGTTGGATCATG
CTTCGTTACGAGCTGCGGAAGCAGCAGCAGCTGCACGCCGACGAGGAGGT
GGAGGAGGGAAAGGCAGAGGACGAGGAGGGATTGACGAGGATGGGTTGCA
GGTTGATCCGTCTCTGCAAGATGGTGTGCCTTCGCTCTCGGAGATCCTGG
CGTCTCGACAGAAGAAAAAGGAGGGGGAGGGAGGGAGGGAGGGAGGGCAG
AAGCACAAGCCCGGGGATTACCAGGTGGCCGAGTACAAGATTGAAGAGGG
GTACCAGATAAGTGAGTACAGGAGCATATACGACTCATGAGGGTGGGAGG
GAAGGGAAGGAGGAGGAAGAGCCATGTTGATTTACGTTTGGATGTAAAGA
GTGTGACAGGAGGGAGAATGAATAAGAAAGGAAGAAAGTGTTTAAATTTA
TCTTACTTTGACGACGCGAATGCTCCACCATTCTGTCTCTTCCCTCGTTT
CTTCTGCGCATTGATCTGTCTTGATGTCTATGCATCATTTTCTAGGCATC
AATGGTCCCCACGACGACCACCCCCTTAGGGACTTTATGCACTTGGACCT
TCACCGAGAGAGAACAAACCCTTTCAACCGGTGCTACTGCCCTCCATGCC
TCACAAAAGCAACCACCCTCAAAGTCGGCGCGTGTCTGACTGGCCTGGGG
CGTCGAGGCTCGAAGAGGGGGTCCCAGAGGAATATGAATTCCTACGGTTC
ACTGGCCGAGCTTGCAGCACGCGGGACGCCCAGGTCGATCGAGAGAGCTT
GACTGGAACACACGGCCTACGTCACGCCTGTGCACGATTATATGAAGGGC
GTTGAGGGGCGCGGAGAGGGGCAAGCGCGAGAAGGGAGGGCGGTGTTTTC
GTGGAAGAGGACATAGAGAGGAGGAAACGAATCAGGAGCGAGGAAACATC
GAAAAGAAAAGGTACAGA back to topprotein sequence of NO22G01510.2 >NO22G01510.2-protein ID=NO22G01510.2-protein|Name=NO22G01510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=260bp
MDPSGSSRAKQRNLKNPLLLDEKLSYVVPPSAPPAPFYDADHHHYQYPPV
PLADGEPILATVLAPSNRTNTTDRTNWTAVTDPGVQAEITRSLSLDPRPQ
EIPSSGVSGMISRCDEGPPSSSSSAGSTFVHSADRLAALRSVEERLRVRE
AERQGCRRNALDHASLRAAEAAAAARRRGGGGGKGRGRGGIDEDGLQVDP
SLQDGVPSLSEILASRQKKKEGEGGREGGQKHKPGDYQVAEYKIEEGYQI
SEYRSIYDS* back to topmRNA from alignment at chr22:445687..449904- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G01510.2 ID=NO22G01510.2|Name=NO22G01510.2|organism=Nannochloropsis oceanica|type=mRNA|length=4218bp|location=Sequence derived from alignment at chr22:445687..449904- (Nannochloropsis oceanica)
CTCAGTACTGCCCGTGCAGATCTGGTGGGTTATGTGTGGGAAGAGAGTGG
GTCGGGGGCGTAAGGACACGAGGCGTGACTGACGGCGGGGGTTTAAGGGT
TATGGCCATGGGTCGCTCAACTAGGATGACGGATATGTGTCATCGAGCAG
CCCCTGAGTCTGTGGGGTCGTCAACCGTTCATGCCGTCCACCGCCCGAGA
GAAAGAGATTTCTTAAGCTACGCGGCATCTTGTGATGGGCGTGCGTAAAA
ACCGCACGCGGGGCAAGTATAAGCGATTCACTAAGCAACTCTGCTGGCTT
TTTGTTCGTAGCCACCTTCCTTCGGGTCGGCGAACCTCAACTGCAACACG
AGGCAACAAGCAAGGGAAGCAAATTCAGCGGGTAGACTTTACACAAAATT
ATAAAATAAGCCAAAACAGTTTTATACAGCATTAGGAAGCAGTTTGAGCT
CGATCAGAACCACTCGGTTTCGTCGTATTTTTGTTTTCACACGATGATTT
GGTTGATCTCCGCAACCACGCCATTTCACCCTTACCAGCCGTACTTCCCC
TGCGTCTGCGCCTTGCTCTGCATGCCTCTCGCCTTCCCCTCCAGCAAATC
CGCTTCTCGTTCTGCGGCCTGAATGGCAAGGCTATTGATCTGATGCTTCC
GCTTGTGGGTCTTGCTTGCTTCCGTGGTGGTGATGGTTTCCCCTGTCTTG
GTGTCGTAAAACATGGCGGCAATAGACACCTTCTCCTTCTTCTTGGGCGG
GCCATGTCGAAATGGATCCCAGGCCTCGTCTCTGGCCGCCACCTCCATAA
CTTGCCCTCCTGCTAGCTGACTAACGGCGGAGAGGTTCCCTGCTGCGAGC
TCTCTCTTCTGCCGTTGCTTTTGCCGGCGGGATTCAGCCCCGGTGAGGGG
TTGTCCGAACTCATCAAGCTCGTCTTGTTCTTCATGCTGTTGGTGCTGGA
TGGGAGGATAGTATTGTTGCTGTTGTTGCTGTGGTTGTTGTTGCGCTTGG
GCGGCGTAATAAGCATCCCATGCCGCCTGGTATTCCCCCCCTCCTCCTCC
TCCTGCTCCTCCTCCTGCTCCTCCTCCTGCTCCTTCTCCCCCTTGTTGTT
GCCGCCCGGCATGTACGTTGTGTACATTACCTCCTCTTCCTGTTGCTGGT
GCTGGTGCTGATGCTGCTGCTGTTGCTGTTGTTGTTGTTCTTGTTGTTGT
TGTGTGCGTGTGTGCGTGGTTGTAGTAGGGTGCCGTGCTCGTCGTGGTCG
AGGTCACCGAAAAAGAAGACGGATGATGAACAGAAGAGAATTGTGCACTC
TCTGCCCCTGCTGAATCTGCAGCTGCTGTCGGTATCGCTGCAGGTGCTGC
CATTGTAGGAGAGATGCCAGGCACATCTTTCTTGACTATCGTTACGCGTG
GTAGAGCAGCGGCTTTAGCGCTTGCCATGAGGGAGGGATGCAGCGGCCCA
GACCCATTTTCTCCCCTTCCTTCGTCCTCGTCCTCATCCTCGTCCTCCCC
ACTGTCTTCACTCTCAGCTGCCACTGCTGCTGCCTCCACTGCTGCTGCTG
CTGCTGCTGCTTCTTTTATATCTTTTACCTTCTTCCTTTCGGCAGCGGCT
TTGTTGCTTTTGACGAGAGCCAGATCTAGAGCTTCTTCGGCTTTGGGTTT
GGGCAGGAGGGCGAACAAGCCCGTCGCACCAGCGGCTTGACGAGAAACGA
TGGCTTTGCTCTCGGCGACTTGAGCTCGGATCTTGCGGCGGCGTTCTCGC
TCCTGAGTTTGGAAGGAGAAGGGGCTCGTGAGAGTGTTGGAAGGGGTTGA
CAAGAAGTCGAGAGGTCAAAAAAGGGAGAGCCAAGAGATCCATGTTCTCA
CTACACCACGGCTGCCGTTCACGCACCTCATCATCCAGCTCTTCCTCCTC
CCCAGCCCCATCTAGATCGTCGTCGTCCTCGTCCTCGTCTCCGTCGTCAT
CACTTAAAAACCTCCCCCCCGTGACCCCCTTGCTGCTATCCCTGGCCCTT
CGCAAAGGCACCGCCCGCATCAATGCTGCTTGTATATGCGCCGGCAAAAT
GGAAAGTGCGACCTTAGCCTTTTTCTTCTTAGGCTTTTTGTCCTTCTTCT
TGTGTTTCTTGCCATCGGTGGCGGTCTCGGGAAGGAGAGCATGGGAGGAG
GCCGAGGAGAAGGGCGGGGGAGGCGGGGCGGAAGACTGCTGTTGCTGCTG
GTTGCCCTCCGCGTCCGAGTCGCTGCCATAGTCCACACCCAGCAAGGACA
TAGTTACTGCCTACCTGTGGTATTGTAGCGATAGAGTGGATAAATGAGCA
TTTGTGGGTAATGTACAGAGCGAGTACCTGAGCAGCCAGATCACGTGATA
AAGGAAGCCCCCCCTTGCATGATCTTATAACTCGGTTGACGTATTGACGT
TGCAGCGAAGGCGAGGGCATCATCACAGGGCTTGCATGGCTGACCTTTCC
TGCTACGCGTGGTTATGTGGTTGCGCCCTGGATTTACACTTTTTGCGATT
GTTGTTTGGGAATCGGGCAGTGGAAGGGGCCATTTCGTGGGGAGGCGACG
TGTATATTTGATATTTCCCCAAATGAGCAACAAGCCCTACCTACACCCAC
ATACTCACAGACAGACATCACTTACACCCTAACCCCGTCATCGGGCTCGT
GGTTTACGGTATGGATCCATCCGGGTCCTCCCGTGCAAAGGTAAGACATT
GTCTTCCCCTCGACATTGTCTTCCCCTCCCCTCTCTCCATTCCACCTTCA
TCCCTCATCTTTCCGCCTCTGTTTTATTCTGGCAAGCGATCTCACCTACA
CACCGTCACCACACCAACACACCAACACACCAACCTACAGCAGCGCAACC
TCAAGAATCCATTGCTCCTCGACGAAAAGCTGTCGTACGTCGTGCCGCCC
TCAGCGCCACCGGCCCCGTTTTACGATGCCGATCATCACCACTACCAGTA
CCCTCCAGTCCCTTTGGCCGACGGGGAGCCCATCCTCGCCACTGTCCTTG
CTCCCAGCAACAGGACCAACACGACTGACCGCACAAACTGGACGGCTGTG
ACCGATCCAGGGGTGCAAGCGGAGATTACGCGTTCACTTTCACTGGACCC
AAGGCCACAAGAGATTCCCTCCTCAGGCGTGAGCGGGATGATTAGTAGAT
GCGACGAGGGACCTCCTTCTTCCTCTTCCTCTGCCGGCAGTACGTTTGTG
CATAGCGCTGACAGGTTGGCGGCCTTGCGAAGTGTAGAGGAGCGCTTGCG
GGTGCGCGAGGCGGAAAGGCAGGGGTGCCGACGTAATGCGTTGGATCATG
CTTCGTTACGAGCTGCGGAAGCAGCAGCAGCTGCACGCCGACGAGGAGGT
GGAGGAGGGAAAGGCAGAGGACGAGGAGGGATTGACGAGGATGGGTTGCA
GGTTGATCCGTCTCTGCAAGATGGTGTGCCTTCGCTCTCGGAGATCCTGG
CGTCTCGACAGAAGAAAAAGGAGGGGGAGGGAGGGAGGGAGGGAGGGCAG
AAGCACAAGCCCGGGGATTACCAGGTGGCCGAGTACAAGATTGAAGAGGG
GTACCAGATAAGTGAGTACAGGAGCATATACGACTCATGAGGGTGGGAGG
GAAGGGAAGGAGGAGGAAGAGCCATGTTGATTTACGTTTGGATGTAAAGA
GTGTGACAGGAGGGAGAATGAATAAGAAAGGAAGAAAGTGTTTAAATTTA
TCTTACTTTGACGACGCGAATGCTCCACCATTCTGTCTCTTCCCTCGTTT
CTTCTGCGCATTGATCTGTCTTGATGTCTATGCATCATTTTCTAGGCATC
AATGGTCCCCACGACGACCACCCCCTTAGGGACTTTATGCACTTGGACCT
TCACCGAGAGAGAACAAACCCTTTCAACCGGTGCTACTGCCCTCCATGCC
TCACAAAAGCAACCACCCTCAAAGTCGGCGCGTGTCTGACTGGCCTGGGG
CGTCGAGGCTCGAAGAGGGGGTCCCAGAGGAATATGAATTCCTACGGTTC
ACTGGCCGAGCTTGCAGCACGCGGGACGCCCAGGTCGATCGAGAGAGCTT
GACTGGAACACACGGCCTACGTCACGCCTGTGCACGATTATATGAAGGGC
GTTGAGGGGCGCGGAGAGGGGCAAGCGCGAGAAGGGAGGGCGGTGTTTTC
GTGGAAGAGGACATAGAGAGGAGGAAACGAATCAGGAGCGAGGAAACATC
GAAAAGAAAAGGTACAGA back to topCoding sequence (CDS) from alignment at chr22:445687..449904- >NO22G01510.2 ID=NO22G01510.2|Name=NO22G01510.2|organism=Nannochloropsis oceanica|type=CDS|length=780bp|location=Sequence derived from alignment at chr22:445687..449904- (Nannochloropsis oceanica)
ATGGATCCATCCGGGTCCTCCCGTGCAAAGCAGCGCAACCTCAAGAATCC
ATTGCTCCTCGACGAAAAGCTGTCGTACGTCGTGCCGCCCTCAGCGCCAC
CGGCCCCGTTTTACGATGCCGATCATCACCACTACCAGTACCCTCCAGTC
CCTTTGGCCGACGGGGAGCCCATCCTCGCCACTGTCCTTGCTCCCAGCAA
CAGGACCAACACGACTGACCGCACAAACTGGACGGCTGTGACCGATCCAG
GGGTGCAAGCGGAGATTACGCGTTCACTTTCACTGGACCCAAGGCCACAA
GAGATTCCCTCCTCAGGCGTGAGCGGGATGATTAGTAGATGCGACGAGGG
ACCTCCTTCTTCCTCTTCCTCTGCCGGCAGTACGTTTGTGCATAGCGCTG
ACAGGTTGGCGGCCTTGCGAAGTGTAGAGGAGCGCTTGCGGGTGCGCGAG
GCGGAAAGGCAGGGGTGCCGACGTAATGCGTTGGATCATGCTTCGTTACG
AGCTGCGGAAGCAGCAGCAGCTGCACGCCGACGAGGAGGTGGAGGAGGGA
AAGGCAGAGGACGAGGAGGGATTGACGAGGATGGGTTGCAGGTTGATCCG
TCTCTGCAAGATGGTGTGCCTTCGCTCTCGGAGATCCTGGCGTCTCGACA
GAAGAAAAAGGAGGGGGAGGGAGGGAGGGAGGGAGGGCAGAAGCACAAGC
CCGGGGATTACCAGGTGGCCGAGTACAAGATTGAAGAGGGGTACCAGATA
AGTGAGTACAGGAGCATATACGACTCATGA back to top
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