NO22G01120, NO22G01120 (gene) Nannochloropsis oceanica

Overview
NameNO22G01120
Unique NameNO22G01120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length432
Alignment locationchr22:343010..343441 -

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Properties
Property NameValue
DescriptionGolgin subfamily A member 7/ERF4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:343010..343441 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO22G01120 vs. NCBI_GenBank
Match: EWM21448.1 (Golgin subfamily A member 7/ERF4 [Nannochloropsis gaditana])

HSP 1 Score: 221.1 bits (562), Expect = 2.200e-54
Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    1 MTYDLARLAPPESLARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            M ++  R APPESLARPRKEVA L ATGLRFINGVSSSYDTTFPP L  V+SE+ F+EA+GR+NNVL MYWPCT CF+CGYV SPVTLGLS  CP +C+ EAE + ++ELE LNHS  FR+ GMVW LRKS LQSW+VIELP
Sbjct:    1 MVFNAPRRAPPESLARPRKEVALLRATGLRFINGVSSSYDTTFPPVLENVLSESAFIEAIGRLNNVLAMYWPCTACFLCGYVFSPVTLGLSLACPRICVGEAEKHGQQELEQLNHSHLFRSLGMVWGLRKSLLQSWIVIELP 142          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: GAX94877.1 (Hypothetical protein PINS_002776, partial [Pythium insidiosum])

HSP 1 Score: 119.4 bits (298), Expect = 9.200e-24
Identity = 52/130 (40.00%), Postives = 77/130 (59.23%), Query Frame = 0
Query:   10 PPESLARPRKE--VASLVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWL 138
            PP +++ P  +  V  L  T +RF+ G++  Y+  FPP L  ++ ++DF  A+ ++NN L  YWPC  C  CGY L P TLG+S  CPNMCI++AE Y R  +  +N    F   G+ W L +S  +SW+
Sbjct:   28 PPVTISAPADDFAVVKLWPTQMRFVTGIAKGYEDDFPPELGHLVKQSDFETAINQINNTLKDYWPCFFCICCGYSLCPCTLGISLLCPNMCIKDAEQYVRALIHRINKRPCFSRVGVEWRLARSCGRSWV 157          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: POM57784.1 (Golgin subfamily A member 7/ERF4 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 119.4 bits (298), Expect = 9.200e-24
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   24 LVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            L  T +RF+ GV+ +Y+  FPP L+ ++ ETDF  A+ ++NN +  YWPC +C  CGY   P TLGLS  CPN CI++AE Y R  +  +N    F  AG+ W L +S  +SW+ I  P
Sbjct:   36 LYPTRMRFVTGVARAYEDDFPPELSHLVKETDFDIAINQINNTMQDYWPCFLCIFCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALITRINKRLCFERAGIEWQLERSCGKSWIQITYP 154          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: XP_008879192.1 (hypothetical protein H310_13461 [Aphanomyces invadans] >ETV92228.1 hypothetical protein H310_13461 [Aphanomyces invadans])

HSP 1 Score: 117.9 bits (294), Expect = 2.700e-23
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    8 LAPPESLARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            + P  + AR  +    L+   + FI+G+++ YD  FP  L G+++E  F +A+ ++NN L  YWPC  C  CGY+    T GLS  CPNMCI +AE Y R  +E +N    F++A + W L K   +SW+ I LP
Sbjct:    1 MQPTMTAARKDRSRVFLMPQRMPFISGITNRYDDDFPIELDGLVTEAQFSQAINQINNTLTDYWPCLFCVCCGYLCCVCTAGLSLLCPNMCISDAEQYTRTLIERINARPCFKDADVEWKLVKKCCRSWIEISLP 135          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: XP_008879193.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV92229.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 117.9 bits (294), Expect = 2.700e-23
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    8 LAPPESLARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            + P  + AR  +    L+   + FI+G+++ YD  FP  L G+++E  F +A+ ++NN L  YWPC  C  CGY+    T GLS  CPNMCI +AE Y R  +E +N    F++A + W L K   +SW+ I LP
Sbjct:    1 MQPTMTAARKDRSRVFLMPQRMPFISGITNRYDDDFPIELDGLVTEAQFSQAINQINNTLTDYWPCLFCVCCGYLCCVCTAGLSLLCPNMCISDAEQYTRTLIERINARPCFKDADVEWKLVKKCCRSWIEISLP 135          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: XP_012197764.1 (hypothetical protein SPRG_19510 [Saprolegnia parasitica CBS 223.65] >KDO31607.1 hypothetical protein SPRG_19510 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 117.9 bits (294), Expect = 2.700e-23
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 0
Query:   14 LARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELPS 144
            +A   +    L+   +RF+NGVS +YD  FPP L  ++ ET F  A+ ++NN L  YWPC  C   GY     T GLS  CP+MCI +AE YAR  ++ +NH   F++ G+ W   K   +SW+ I  P+
Sbjct:    1 MAMAARTTVRLMPAHMRFVNGVSRAYDDEFPPELRHLVDETQFTHAINQINNTLTDYWPCLFCVCYGYACCVCTGGLSLLCPHMCISDAEQYARTLIDRINHRPCFQDVGVEWKFVKRCGRSWIEISFPN 130          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: XP_009520535.1 (hypothetical protein PHYSODRAFT_482152 [Phytophthora sojae] >EGZ25247.1 hypothetical protein PHYSODRAFT_482152 [Phytophthora sojae])

HSP 1 Score: 117.5 bits (293), Expect = 3.500e-23
Identity = 52/119 (43.70%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   24 LVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            L  T +RF+ GV+ +Y+  FPP L+ ++ ETDF  A+ ++NN +  YWPC  C  CGY   P TLGLS  CPN CI++AE Y R  L  +N    F   G+ W L +S  +SW+ I  P
Sbjct:   36 LYPTRMRFVTGVARAYEDDFPPELSHLVKETDFEIAINQINNTMQDYWPCFFCIFCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLTRINKRVCFERVGVEWQLVRSCGRSWIQITYP 154          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: OWZ05182.1 (Golgin subfamily A protein [Phytophthora megakarya])

HSP 1 Score: 117.5 bits (293), Expect = 3.500e-23
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   24 LVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            L  T +RF+ GV+ +Y+  FP  L+ ++ ETDF  A+ ++NN +  YWPC +C +CGY   P TLGLS  CPN CI++AE Y R  L  +N    F  AG+ W L +S  +SW+ I  P
Sbjct:   32 LYPTRMRFVTGVARAYEDDFPFELSHLVKETDFEIAINQINNTMQDYWPCFLCILCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLTRINKRVCFERAGVEWQLERSCGKSWIQIAYP 150          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: XP_008609291.1 (hypothetical protein SDRG_05356 [Saprolegnia diclina VS20] >EQC37129.1 hypothetical protein SDRG_05356 [Saprolegnia diclina VS20])

HSP 1 Score: 116.3 bits (290), Expect = 7.800e-23
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 0
Query:   14 LARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELPS 144
            +A P +    L+   +RF+NGVS +YD  FP  L  ++ ET F  A+ ++NN L  YWPC  C   GY     T GLS  CP+MCI +AE YAR  ++ +NH   F++ G+ W   K   +SW+ I  P+
Sbjct:    1 MAMPGRTTVRLMPAHMRFVNGVSRAYDDEFPHELRHLVDETQFSHAINQINNTLTDYWPCLFCVCYGYACCVCTGGLSLLCPHMCISDAEQYARTLIDRINHRPCFQDVGVEWKFVKRCGRSWIEISFPT 130          
BLAST of NO22G01120 vs. NCBI_GenBank
Match: XP_008905656.1 (hypothetical protein PPTG_11141 [Phytophthora parasitica INRA-310] >ETI46872.1 hypothetical protein F443_08800 [Phytophthora parasitica P1569] >ETK86800.1 hypothetical protein L915_08640 [Phytophthora parasitica] >ETL40213.1 hypothetical protein L916_08569 [Phytophthora parasitica] >ETL93361.1 hypothetical protein L917_08467 [Phytophthora parasitica] >ETM46616.1 hypothetical protein L914_08524 [Phytophthora parasitica] >ETN09095.1 hypothetical protein PPTG_11141 [Phytophthora parasitica INRA-310] >ETO75564.1 hypothetical protein F444_08869 [Phytophthora parasitica P1976] >ETP16662.1 hypothetical protein F441_08781 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 115.5 bits (288), Expect = 1.300e-22
Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   24 LVATGLRFINGVSSSYDTTFPPALAGVMSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQEAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELP 143
            L  T +RF+ GV+ +Y+  FP  L+ ++ ET+F  A+ ++NN +  YWPC  CF CGY   P TLGLS  CPN CI++AE Y R  L  +N    F  A + W L +S+ +SW+ I  P
Sbjct:   36 LYPTRMRFVTGVAQAYEDDFPSELSHLVKETEFEVAINQINNTMQDYWPCFFCFCCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLLRINKRHCFERADVEWQLIRSWGRSWVQITYP 154          
The following BLAST results are available for this feature:
BLAST of NO22G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21448.12.200e-5471.83Golgin subfamily A member 7/ERF4 [Nannochloropsis ... [more]
GAX94877.19.200e-2440.00Hypothetical protein PINS_002776, partial [Pythium... [more]
POM57784.19.200e-2443.70Golgin subfamily A member 7/ERF4 [Phytophthora pal... [more]
XP_008879192.12.700e-2339.26hypothetical protein H310_13461 [Aphanomyces invad... [more]
XP_008879193.12.700e-2339.26hypothetical protein, variant [Aphanomyces invadan... [more]
XP_012197764.12.700e-2340.00hypothetical protein SPRG_19510 [Saprolegnia paras... [more]
XP_009520535.13.500e-2343.70hypothetical protein PHYSODRAFT_482152 [Phytophtho... [more]
OWZ05182.13.500e-2343.70Golgin subfamily A protein [Phytophthora megakarya... [more]
XP_008609291.17.800e-2340.00hypothetical protein SDRG_05356 [Saprolegnia dicli... [more]
XP_008905656.11.300e-2242.86hypothetical protein PPTG_11141 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01120.1NO22G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595658gene_7114Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g31gene8963Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01120.1NO22G01120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01120 ID=NO22G01120|Name=NO22G01120|organism=Nannochloropsis oceanica|type=gene|length=432bp
ATGACGTACGATCTTGCGCGGCTGGCGCCGCCCGAGTCTTTGGCCAGGCC
ACGGAAAGAAGTGGCCTCGCTAGTCGCCACGGGGCTGCGCTTTATCAATG
GCGTTTCCTCCTCCTACGATACGACCTTCCCACCCGCACTCGCAGGGGTA
ATGAGCGAAACTGATTTCGTGGAAGCGGTGGGGAGGGTGAACAATGTATT
AGTCATGTACTGGCCGTGCACGATGTGCTTTGTCTGTGGGTATGTCCTGA
GCCCTGTTACCTTAGGACTTTCTTTTGGATGCCCTAACATGTGTATCCAA
GAGGCGGAGCATTACGCGCGAAGGGAGCTGGAGTACTTGAATCACTCGGA
AGCCTTTCGAAACGCAGGCATGGTATGGAGCTTGCGCAAGAGTTTTTTGC
AGTCGTGGCTGGTGATCGAGTTGCCTTCGTGA
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protein sequence of NO22G01120.1

>NO22G01120.1-protein ID=NO22G01120.1-protein|Name=NO22G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=144bp
MTYDLARLAPPESLARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGV
MSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQ
EAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELPS*
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Synonyms
Publications