NO22G00680, NO22G00680 (gene) Nannochloropsis oceanica

Overview
NameNO22G00680
Unique NameNO22G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1942
Alignment locationchr22:231273..233214 -

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Properties
Property NameValue
DescriptionLipoyl synthase, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:231273..233214 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR031691LIAS_N
IPR007197rSAM
IPR006638Elp3/MiaB/NifB
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
BLAST of NO22G00680 vs. NCBI_GenBank
Match: EWM21412.1 (lipoic acid synthetase [Nannochloropsis gaditana])

HSP 1 Score: 595.1 bits (1533), Expect = 1.500e-166
Identity = 297/351 (84.62%), Postives = 315/351 (89.74%), Query Frame = 0
Query:   17 ALLLLLPFIAHAFSFSFFRPAVAQQQRHARS-STLMMSTTESK-PITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAKAER 366
            +L +LLP    AF+ S         QR   S +T+ MSTTE + P+ PKVGG MPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPP ADP EPLKTAEA+ARWGI YVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDF GDL AVERLATSGLDVYAHNVETVERLQKYVRDKRA+Y QSL+VLAHAK  QP+VYTKTSLMLGLGE E EVL+AMRDMRAHNVDVLTLGQYLRPT+HHLAVVEYVTP++FDF+R +GEEMGFKYVASGPLVRSSYKAGEFFLENELKR KA+R
Sbjct:   18 SLCILLPGSIDAFAPSRLLLTSWGDQRPTISLNTITMSTTEPRPPVVPKVGGPMPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPPADPFEPLKTAEAVARWGINYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFRGDLAAVERLATSGLDVYAHNVETVERLQKYVRDKRASYTQSLQVLAHAKAAQPTVYTKTSLMLGLGEEEGEVLEAMRDMRAHNVDVLTLGQYLRPTDHHLAVVEYVTPEKFDFFRKQGEEMGFKYVASGPLVRSSYKAGEFFLENELKRVKAKR 368          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: CEM03186.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 472.6 bits (1215), Expect = 1.100e-129
Identity = 224/300 (74.67%), Postives = 257/300 (85.67%), Query Frame = 0
Query:   57 SKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLEN 357
            S+   P+VG AMP  +RPDWF VPAPGG +TRFEEL++SLR+L LHTVCEEAQCPNIGECWNGGT TIMLLGDTCTRGC+FCAV TS  PPA DP EPL TA AI++WG+ Y+VLTSVDRDDM DGGADHFA+TVE++K   P +LVECLVSDF GD +AVERLATSGLDVYAHNVETVERLQ++VRDKRA Y QSL VL  AKE +P VYTKTSLMLGLGETE+EV+Q M+D+R  + DV+T GQYLRPT+HHL+VVEY+TPD+F  Y   GEEMGF+YVASGPLVRSSYKAGE+F+ N
Sbjct:   43 SEGTIPRVGAAMP-AQRPDWFRVPAPGGIYTRFEELKDSLRDLKLHTVCEEAQCPNIGECWNGGTATIMLLGDTCTRGCRFCAVNTSPEPPAPDPDEPLNTATAISQWGVDYIVLTSVDRDDMADGGADHFARTVEFLKAASPHILVECLVSDFQGDKEAVERLATSGLDVYAHNVETVERLQRFVRDKRANYKQSLDVLRQAKEAEPRVYTKTSLMLGLGETEDEVIQTMKDLRDIDCDVITFGQYLRPTDHHLSVVEYITPDKFAKYGRLGEEMGFRYVASGPLVRSSYKAGEYFMTN 341          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: CBJ31058.1 (lipoate synthase [Ectocarpus siliculosus])

HSP 1 Score: 468.4 bits (1204), Expect = 2.100e-128
Identity = 226/301 (75.08%), Postives = 253/301 (84.05%), Query Frame = 0
Query:   68 MPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKEC--QPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAKAERE 367
            MPE +RP WF VPAPGG HT++EEL+ SL+EL+LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQ PP  DP EP  TAEAI+RWGI YVVLTSVDRDD+ DGGA+HFA TVE IK  K +MLVECLVSDF GD  AV+RLATSGLDVYAHN+ETV RLQ YVRDKRA Y QSL VL  AK       VYTKTSLMLGLGETEEE+L+ MRD+R   VDVLTLGQYLRPT+HHLAVV+YVTP++FD Y  +GE +GF YVASGP+VRSSYKAGEFF+EN ++R + E +
Sbjct:    1 MPE-QRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQKPPEPDPFEPFHTAEAISRWGINYVVLTSVDRDDLEDGGANHFATTVELIKTAKSDMLVECLVSDFRGDYAAVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLRRAKIAGEATGVYTKTSLMLGLGETEEEILETMRDLREAGVDVLTLGQYLRPTDHHLAVVDYVTPEKFDQYARQGEALGFSYVASGPMVRSSYKAGEFFMENMIRRGRQEED 300          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: GAX14244.1 (lipoyl synthase [Fistulifera solaris])

HSP 1 Score: 464.9 bits (1195), Expect = 2.300e-127
Identity = 222/308 (72.08%), Postives = 256/308 (83.12%), Query Frame = 0
Query:   53 STTESKPITPKVGGAMPEGRRPDWFHVPAPG-GSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELK 360
            S  ES+   PKVG  MP+G RP WF VPAP     +R+ E++ESLR LDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAV T   PP  DP EP KTA+A+ +WG+ Y+VLTSVDRDD+PDGGA HFA TVE +K +KPE+LVECLVSDF G L +VE LA SGLDVYAHNVETVERLQ++VRD RA YAQSL  L HAK+ +PS+YTKTS+MLGLGET+EEV+Q M+D+RA +VDV+T GQYLRPTE HLAVVEYV P++FD +R  GEEMGFKYVASGPLVRSSYKAGEFF+E+ +K
Sbjct:   74 SEEESELRRPKVGAEMPKG-RPSWFKVPAPSQAKDSRYSEVKESLRNLDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVNTDAKPPPPDPFEPFKTADAVTKWGVDYIVLTSVDRDDIPDGGAQHFAHTVELLKQKKPELLVECLVSDFQGMLSSVETLALSGLDVYAHNVETVERLQRFVRDHRAGYAQSLSTLEHAKKVKPSLYTKTSIMLGLGETDEEVIQTMKDLRAFDVDVVTFGQYLRPTEQHLAVVEYVRPEKFDMFRQLGEEMGFKYVASGPLVRSSYKAGEFFMEHMIK 380          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: GAX20908.1 (lipoyl synthase [Fistulifera solaris])

HSP 1 Score: 458.8 bits (1179), Expect = 1.700e-125
Identity = 218/308 (70.78%), Postives = 256/308 (83.12%), Query Frame = 0
Query:   53 STTESKPITPKVGGAMPEGRRPDWFHVPAPG-GSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELK 360
            S  ES+   PKVG  MP+G RP WF VPAP     +R+ E++ESLR LDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAV T   PP  DP EP KTA+A+ +WG+ Y+VLTSVDRDD+PDGGA HFA TVE +K +KPE+LVECLVSDF G L +VE LA SGLDVYAHNVETVERLQ++VRD RA YAQSL  L HAK+ +PS+YTKTS+MLGLGET+EEV+Q M+D+RA +VDV+T GQYLRPTE HLAVVEYV P++FD +R  GEE+GFKYVASGP+VRSSYKAGEF++++ +K
Sbjct:   37 SKEESELRRPKVGAEMPKG-RPSWFKVPAPSQAKDSRYSEVKESLRNLDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVNTDAKPPPPDPFEPFKTADAVTKWGVDYIVLTSVDRDDIPDGGAQHFAHTVELLKQKKPELLVECLVSDFQGMLSSVETLALSGLDVYAHNVETVERLQRFVRDHRAGYAQSLSTLEHAKKVKPSLYTKTSIMLGLGETDEEVIQTMKDLRAIDVDVVTFGQYLRPTEKHLAVVEYVRPEKFDMFRQLGEEIGFKYVASGPMVRSSYKAGEFYMKHMIK 343          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: XP_002286650.1 (lipoic acid synthetase, partial [Thalassiosira pseudonana CCMP1335] >EED96291.1 lipoic acid synthetase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 456.8 bits (1174), Expect = 6.300e-125
Identity = 215/307 (70.03%), Postives = 254/307 (82.74%), Query Frame = 0
Query:   60 ITPKVGGAMPEGRRPDWFHVPAPGGSH-TRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAKAER 366
            + PKVG  MP+G RP WFHVPAP  S  +R+++++ESL  L L+TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAVKT Q PP  DP EP KTAEA+ +WG+ Y+VLTSVDRDD+PDGGA HFA TVE +K   P +LVECLVSDF GD K+V  LATSGLDVYAHNVETVERLQKYVRD RA Y QS+  L  AK  QP +YTKTSLMLGLGET++EV+Q M+D+R+ +VDV+T GQYLRPTE+HL+VVEYVTP++FD +R  GEE+GFKYVASGPLVRSSYKAGEF+L + + + + E+
Sbjct:    2 VRPKVGAEMPKG-RPSWFHVPAPSSSEASRYQQVKESLSTLSLNTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVKTDQKPPEPDPFEPFKTAEAVTKWGVDYIVLTSVDRDDIPDGGAQHFATTVELLKQANPSLLVECLVSDFQGDSKSVATLATSGLDVYAHNVETVERLQKYVRDARAGYWQSINTLRDAKRAQPDLYTKTSLMLGLGETDDEVIQTMKDLRSVDVDVVTFGQYLRPTENHLSVVEYVTPEKFDHFREIGEELGFKYVASGPLVRSSYKAGEFYLTHMINKEREEK 307          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: XP_005710221.1 (Lipoate synthase [Chondrus crispus] >CDF39927.1 Lipoate synthase [Chondrus crispus])

HSP 1 Score: 453.8 bits (1166), Expect = 5.300e-124
Identity = 218/305 (71.48%), Postives = 251/305 (82.30%), Query Frame = 0
Query:   61 TPKVGGAMPEGRRPDWFHVPAPG---GSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAK 363
            TP+VG   P GRRP WFHVPAP     + +RF++++  LR+L LHTVCEEA CPNIGECWNGGT TIMLLGDTCTRGC+FCAV T+  PP A+P EPL TA A+A+WG+ YVVLTSVDRDDMPDGGADHFA+TVEY+K+  P MLVECLVSDF GD  AV+RLA SGLDVYAHNVETV+RLQ+YVRD RA+Y QSL VL  AKE    VYTKTSLMLGLGET EEV QAM D+R   VDVLTLGQYLRPTE HL+VVEYVTP+RF  +  +G+EMGF+YVA+GPLVRSSYKAGE+FL N +++ K
Sbjct:   10 TPRVGAPQPPGRRPSWFHVPAPDVNKQTASRFQKMKSDLRDLSLHTVCEEAACPNIGECWNGGTATIMLLGDTCTRGCRFCAVNTASKPPPANPAEPLNTAAAVAKWGVDYVVLTSVDRDDMPDGGADHFARTVEYLKMYCPNMLVECLVSDFRGDFAAVDRLANSGLDVYAHNVETVQRLQRYVRDPRASYEQSLSVLKRAKE--SGVYTKTSLMLGLGETNEEVRQAMLDIREAGVDVLTLGQYLRPTERHLSVVEYVTPERFRLWEEEGKEMGFRYVAAGPLVRSSYKAGEYFLNNMIRQDK 312          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: KOO24816.1 (lipoic acid synthetase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 451.4 bits (1160), Expect = 2.600e-123
Identity = 219/321 (68.22%), Postives = 255/321 (79.44%), Query Frame = 0
Query:   57 SKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLREL------DLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKEC-----QPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAKAERE 367
            ++ + PKVG  MPEGRRPDWFHVPAPGG++TRF +L+ESL +        L TVCEEAQCPNIGECWNGGT TIMLLGDTCTRGCKFCAVKT  AP   D  EP  TA+A+ +WG+ Y+VLTSVDRDD+PDGGA HFAQTV  +KLRKP + VECLVSDF GDLK+V  LA SGLDVYAHN+ETVERLQ +VRDKRA+Y QSL VL  AK          VYTK+S+MLGLGETE E+LQ M D+R   VDVLTLGQYLRPT+HHLAVV+YVTP+RF++YR +GE MGF+YVASGP+VRSSYKAGE F+   + R ++E E
Sbjct:   60 TEAMRPKVGAPMPEGRRPDWFHVPAPGGANTRFADLKESLEKTAHEGKPRLATVCEEAQCPNIGECWNGGTATIMLLGDTCTRGCKFCAVKTDAAPEPPDEEEPWNTADAVTQWGVDYIVLTSVDRDDLPDGGAAHFAQTVGLLKLRKPSLRVECLVSDFQGDLKSVAMLAQSGLDVYAHNIETVERLQPFVRDKRASYKQSLSVLKEAKRLGELPGAQRVYTKSSIMLGLGETEAEILQTMHDLRQVGVDVLTLGQYLRPTDHHLAVVDYVTPERFEYYRQQGEAMGFRYVASGPMVRSSYKAGELFMAAMMDRDRSEAE 380          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: SOV17878.1 (lipoyl synthase [Plasmodium gaboni])

HSP 1 Score: 448.0 bits (1151), Expect = 2.900e-122
Identity = 205/326 (62.88%), Postives = 263/326 (80.67%), Query Frame = 0
Query:   40 QQQRHARSSTLMMSTTESKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAKAER 366
            +Q    + S    S+T+   +TPKVG  MPEG++PDWFHVPAP G  T++ +L+E +++L+LHTVCEEAQCPNIGECWN GT TIMLLGDTCTRGC+FC++KTS  P   D  EP  TA+AI  W I YVVLTSVDRDD+PDGGA HFA+TVE +K  +P++L+ECLVSDF G++ +V +LA SGLDVYAHN+ETV+RLQKYVRDKRA Y QSL VL  AKE  P +YTKTS+MLGLGET+EEV+Q M+D R +N+DV+T GQYLRPT++HL++VEY++P  F++Y+ +G +MGFKY+ASGPLVRSSYKAGE+F++N + +   E+
Sbjct:  133 EQNEKKKGSEKFSSSTKKLLLTPKVGNKMPEGKKPDWFHVPAPSG--TKYNKLKEDIKKLNLHTVCEEAQCPNIGECWNIGTATIMLLGDTCTRGCRFCSIKTSSNPLPPDINEPFNTAKAICEWNIDYVVLTSVDRDDLPDGGASHFAKTVELVKFSRPDILIECLVSDFQGNIDSVRKLAFSGLDVYAHNIETVKRLQKYVRDKRANYEQSLFVLKMAKEINPKIYTKTSIMLGLGETKEEVIQTMQDARKNNIDVITFGQYLRPTKNHLSIVEYISPQIFEYYKEEGLKMGFKYIASGPLVRSSYKAGEYFMKNLVNQRNKEK 456          
BLAST of NO22G00680 vs. NCBI_GenBank
Match: XP_018640221.1 (lipoyl synthase [Plasmodium gaboni] >KYN97216.1 lipoyl synthase [Plasmodium gaboni])

HSP 1 Score: 447.2 bits (1149), Expect = 5.000e-122
Identity = 205/326 (62.88%), Postives = 263/326 (80.67%), Query Frame = 0
Query:   40 QQQRHARSSTLMMSTTESKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAADPLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYAQSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTLGQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAGEFFLENELKRAKAER 366
            +Q    + S    S+T+   +TPKVG  MPEG++PDWFHVPAP G  T++ +L+E +++L+LHTVCEEAQCPNIGECWN GT TIMLLGDTCTRGC+FC++KTS  P   D  EP  TA+AI  W I YVVLTSVDRDD+PDGGA HFA+TVE +K  +P++L+ECLVSDF G++ +V +LA SGLDVYAHN+ETV+RLQKYVRDKRA Y QSL VL  AKE  P +YTKTS+MLGLGET+EEV+Q M+D R +N+DV+T GQYLRPT++HL++VEY++P  F++Y+ +G +MGFKY+ASGPLVRSSYKAGE+F++N + +   E+
Sbjct:  133 EQNEKKKGSEKFSSSTKKLLLTPKVGNKMPEGKKPDWFHVPAPSG--TKYNKLKEDIKKLNLHTVCEEAQCPNIGECWNIGTATIMLLGDTCTRGCRFCSIKTSSNPLPPDINEPFNTAKAICEWNIDYVVLTSVDRDDLPDGGASHFAKTVELVKFSRPDILIECLVSDFQGNIDSVRKLAFSGLDVYAHNIETVKRLQKYVRDKRANYEQSLFVLKTAKEINPKLYTKTSIMLGLGETKEEVIQTMQDARKNNIDVITFGQYLRPTKNHLSIVEYISPQIFEYYKEEGLKMGFKYIASGPLVRSSYKAGEYFMKNLVNQRNKEK 456          
The following BLAST results are available for this feature:
BLAST of NO22G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21412.11.500e-16684.62lipoic acid synthetase [Nannochloropsis gaditana][more]
CEM03186.11.100e-12974.67unnamed protein product [Vitrella brassicaformis C... [more]
CBJ31058.12.100e-12875.08lipoate synthase [Ectocarpus siliculosus][more]
GAX14244.12.300e-12772.08lipoyl synthase [Fistulifera solaris][more]
GAX20908.11.700e-12570.78lipoyl synthase [Fistulifera solaris][more]
XP_002286650.16.300e-12570.03lipoic acid synthetase, partial [Thalassiosira pse... [more]
XP_005710221.15.300e-12471.48Lipoate synthase [Chondrus crispus] >CDF39927.1 Li... [more]
KOO24816.12.600e-12368.22lipoic acid synthetase [Chrysochromulina sp. CCMP2... [more]
SOV17878.12.900e-12262.88lipoyl synthase [Plasmodium gaboni][more]
XP_018640221.15.000e-12262.88lipoyl synthase [Plasmodium gaboni] >KYN97216.1 li... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004200NSK004200Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00680.1NO22G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595486gene_7066Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100466g2gene9010Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00680.1NO22G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00680 ID=NO22G00680|Name=NO22G00680|organism=Nannochloropsis oceanica|type=gene|length=1942bp
TGATGAGGTTCACCTGGGCCTTGGAAATGAAGGCGAGCCGACGTTATCTC
CAATCCATCGCTCACCCAAATCCAAGCCCCTGTCCTTGTCGATGGCTGGA
CGAACACAAGCACACACACACACACACTCACAAACACCCCCCCCCTCTGA
TCTCATTGGGTCAAACTCCACCACAACGTACAGCCGTCACGTTGCTCACT
TCGATCGATAGTTTGTTGTCCCCCTTCTCCTTGAACGCGACGCAAGCACG
GACGCACGAAGCAACGTCTGAGAGCCAAAGGCAAGAGAGCAGGCAGCAGC
ATGACCGTGAGCCCACCACTCCCACCACGACCGGTCCTCCTCTTCGGCGC
TCTCCTCCTTCTCCTCCCTTTTATTGCCCACGCCTTCTCTTTTTCCTTCT
TCAGGCCGGCGGTGGCGCAACAACAACGCCACGCCCGCAGCAGCACCCTA
ATGATGTCTACCACAGAGTCCAAGCCCATCACCCCCAAGGTGGGTGGCGC
CATGCCCGAAGGCCGTCGTCCAGACTGGTTTCACGTCCCAGCCCCCGGGG
GCTCTCATACGCGCTTTGAGGAACTGAGGGAGAGCCTGCGGGAGCTGGAC
TTGCACACCGTGTGCGAAGAGGCGCAATGCCCTAATATCGGCGAGTGCTG
GAACGGTGGCACCGGCACAATTATGTTGTTGGGGGACACGTGCACGCGgt
gagtaaggggagaggaaagagggaaggctgtgaggggggtaatgtggttt
gttattcctcgatcgcggacgggtcgtagcggagggctggcgggttggta
ggaggaagagtctgtcacacggcctagaccatcatctctccacttatact
ccctccctcctctcgccccctctcgcccgcttcaaaccttccctcagTGG
CTGCAAATTTTGCGCTGTCAAGACCTCCCAAGCTCCTCCAGCTGCCGATC
CCCTAGAGCCCCTTAAAACAGCCGAGGCCATTGCGCGTTGGGGTATAACC
TACGTCGTGCTCACAAGCGTCGATCGCGACGACATGCCGGATGGAGGCGC
GGACCACTTCGCACAAACGGTCGAGTACATCAAGTTGCGGAAGCCTGAGA
TGTTGGTTGAATGCCTAGTGAGTGATTTTGCGGGGGACCTCAAGGCCGTT
GAGAGGTTGGCAACGTCTGGTTTGGATGTGTACGCGCACAACGTCGAAAC
GGTGGAGAGGCTTCAGAAATACGTTCGAGACAAGCGAGCGACATACGCAC
AGTCTCTCCGGGTGCTGGCGCATGCGAAGGAGTGCCAACCATCCGTGTAT
ACCAAGACGAGCTTAATGTTGGGGTTGGGCGAGACCGAGGAAGAAGTATT
GCAGGCCATGCGTGACATGCGCGCGCACAATGTGGACGTGTTGACGCTTG
GTCAGTATTTGCGTCCAACTGAGCACCATTTGGCCGTGGTAGAGTATGTG
ACGCCAGATAGGTTCGACTTCTACCGCGTAAAAGGGGAAGAAATGGGGTT
TAAGTACGTGGCAAGTGGCCCGCTTGTCCGATCTTCGTACAAAGCCGGAG
AGTTCTTTTTGGAAAATGAGCTCAAGAGGGCAAAGGCAGAGAGGGAGGGA
GGAGGGGTAGTGGCATAGAGGAGAGCTGAAGGTGTATATAGGGAGAGAAA
GAAGAGAACGCGTATTAGTAGGCATCCTGAAGGGCTGTAAGAGAGGATAG
AGAGCGGCTGTTAGCTTAAAGTGCTGTGAGTGTTATACGCGCGCAATCGA
ACATGTGATGTGATTTAAACCATGCGTGTGCGGGTCGTGTGTGTGTGTGT
GTGTGTGATATGTGTGTATTGTGTTTGTGTGAGTGTAGGTGTTTTGTGAG
GTGACCGACGGGAATGCTTCACGACATATGAGATGTTGTCGAGTTTCTCT
TTGCGCTCAAATAAGAACGAATCACGACAAGTGTGCTGACTT
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protein sequence of NO22G00680.1

>NO22G00680.1-protein ID=NO22G00680.1-protein|Name=NO22G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MTVSPPLPPRPVLLFGALLLLLPFIAHAFSFSFFRPAVAQQQRHARSSTL
MMSTTESKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELD
LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAAD
PLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPE
MLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYA
QSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTL
GQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAG
EFFLENELKRAKAEREGGGVVA*
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Synonyms
Publications