jgi.p|Nanoce1779_2|595486, gene_7066 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|595486
Unique Namegene_7066
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:211649..214779 -

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Properties
Property NameValue
TranscriptId595572
ProteinId595486
Product namelipoic acid synthetase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:211649..214779 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
GO:0016992lipoate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00680NO22G00680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595486mRNA_7066-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595486mRNA_7066Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|595486

>mRNA_7066-protein ID=mRNA_7066-protein|Name=jgi.p|Nanoce1779_2|595486|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MTVSPPLPPRPVLLFGALLLLLPFIAHAFSFSFFRPAVAQQQRHARSSTL
MMSTTESKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELD
LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAAD
PLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPE
MLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYA
QSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTL
GQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAG
EFFLENELKRAKAEREGGGVVA*
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Synonyms
Publications