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Properties
| Property Name | Value |
|---|
| TranscriptId | 595572 |
| Track | FilteredModels2 |
| ProteinId | 595486 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:211649..214779 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7066 ID=mRNA_7066|Name=jgi.p|Nanoce1779_2|595486|organism=Nannochloropsis oceanica|type=mRNA|length=2932bp
ACAGCCGTCACGTTGCTCACTTCGATCGATAGTTTGTTGTCCCCCTTCTC
CTTGAACGCGACGCAAGCACGGACGCACGAAGCAACGTCTGAGAGCCAAA
GGCAAGAGAGCAGGCAGCAGCATGACCGTGAGCCCACCACTCCCACCACG
ACCGGTCCTCCTCTTCGGCGCTCTCCTCCTTCTCCTCCCTTTTATTGCCC
ACGCCTTCTCTTTTTCCTTCTTCAGGCCGGCGGTGGCGCAACAACAACGC
CACGCCCGCAGCAGCACCCTAATGATGTCTACCACAGAGTCCAAGCCCAT
CACCCCCAAGGTGGGTGGCGCCATGCCCGAAGGCCGTCGTCCAGACTGGT
TTCACGTCCCAGCCCCCGGGGGCTCTCATACGCGCTTTGAGGAACTGAGG
GAGAGCCTGCGGGAGCTGGACTTGCACACCGTGTGCGAAGAGGCGCAATG
CCCTAATATCGGCGAGTGCTGGAACGGTGGCACCGGCACAATTATGTTGT
TGGGGGACACGTGCACGCGTGGCTGCAAATTTTGCGCTGTCAAGACCTCC
CAAGCTCCTCCAGCTGCCGATCCCCTAGAGCCCCTTAAAACAGCCGAGGC
CATTGCGCGTTGGGGTATAACCTACGTCGTGCTCACAAGCGTCGATCGCG
ACGACATGCCGGATGGAGGCGCGGACCACTTCGCACAAACGGTCGAGTAC
ATCAAGTTGCGGAAGCCTGAGATGTTGGTTGAATGCCTAGTGAGTGATTT
TGCGGGGGACCTCAAGGCCGTTGAGAGGTTGGCAACGTCTGGTTTGGATG
TGTACGCGCACAACGTCGAAACGGTGGAGAGGCTTCAGAAATACGTTCGA
GACAAGCGAGCGACATACGCACAGTCTCTCCGGGTGCTGGCGCATGCGAA
GGAGTGCCAACCATCCGTGTATACCAAGACGAGCTTAATGTTGGGGTTGG
GCGAGACCGAGGAAGAAGTATTGCAGGCCATGCGTGACATGCGCGCGCAC
AATGTGGACGTGTTGACGCTTGGTCAGTATTTGCGTCCAACTGAGCACCA
TTTGGCCGTGGTAGAGTATGTGACGCCAGATAGGTTCGACTTCTACCGCG
TAAAAGGGGAAGAAATGGGGTTTAAGTACGTGGCAAGTGGCCCGCTTGTC
CGATCTTCGTACAAAGCCGGAGAGTTCTTTTTGGAAAATGAGCTCAAGAG
GGCAAAGGCAGAGAGGGAGGGAGGAGGGGTAGTGGCATAGAGGAGAGCTG
AAGGTGTATATAGGGAGAGAAAGAAGAGAACGCGTATTAGTAGGCATCCT
GAAGGGCTGTAAGAGAGGATAGAGAGCGGCTGTTAGCTTAAAGTGCTGTG
AGTGTTATACGCGCGCAATCGAACATGTGATGTGATTTAAACCATGCGTG
TGCGGGTCGTGTGTGTGTGTGTGTGTGTGATATGTGTGTATTGTGTTTGT
GTGAGTGTAGGTGTTTTGTGAGGTGACCGACGGGAATGCTTCACGACATA
TGAGATGTTGTCGAGTTTCTCTTTGCGCTCAAATAAGAACGAATCACGAC
AAGTGTGCTGACTTTTCCCTTCAAAATTTCGGTGCGTTTATTGATTTGTT
ACGGAGAATATGTTATGTCGTTGCGAGAGGTATTCATGCTGTTATCTTCA
AAAGTCCACATCGGCGTCCGCAACGCCATCCGTGCTTGGAGACCAATGTC
GTGGGGGTCGAGAGAGCCCTTTCGAACTTTTTTCGATGAAAATCATTTAC
ATGCATTCTTATGTGTAAAAATAACACATTGTGGTGCCACGATCGCATGG
CATCAACGGTTCTGTAAGCACTTACTTATCCCCTAAGTTGCAATGGCTAC
CATGACCACCAAGAGGACAACCCGTCCAGCCGCAATCTCAGCGGCAAAGG
AGGATGGGCACCGAAATTTCGGGCTAAATTGCATGGATAGCGAAAACATA
ATCGTGCAAAGTCGTCTCTATCGTGGGTTGTTTTGCCTCTTTTCCGAGCC
CTCGTGTTCCTCTTTGCCCATGAGGCCAAACAAGGCTCTCTTGCGTCCTC
CCCTACATCGTGCCCTTTCCTCTCCTCCCCTTGACTCGATCATCTGCTTC
TTAGTATCTGCACCCTTTTTCCTCTCTCGTACGCTCCTCCTATTCCTGCT
TTCCATTCCATTGTGGCTGACGACGCTTTTTTCTTCCCCTCCCTCCTTCA
GCCTTCCATCCTTTCACGTCTAATTCACGACGACAAAAATGGGCTATCCA
CCTCTCCTCCGGAATCTCATCTCCTCCGCACAACATAGCAAAAATCCCCT
CTTCCTCTATCTTATGTTTCTCTCTTTCACTCCTCACTTTGCTCCTCGTT
CTATCACTAAAACATATCAAAATTTCTCCCCTCGATATCACAGCCCCATC
ACATCATCCCATCCACCACCTATCGCCTCACACTACAACAGAAAGACAAA
TGAGCTTAGGACGAATGAAACCTCTTCTCGCTCTTCGCATGGTCCACCAA
CAACGGCGCAGGTGCAAATTGATAGCCATACTTGGCCGCAAAGCCTTCCA
GCATCGCACAGTACTTTCCGACTCCCATCGAGTCCAGAAGGCGGAAAGGT
CCTCCGAGGAAAGGTGGGAAACCAATCCCAAATACAGCGCCAATGTCACC
CTCCACAGGCGAGGCGATCACGCCGTCTTGCAGGGCGAAGACCGCCTCGT
TCACAAAGCGCGAAACCAAGCGATTCTGCACCTCCTCTTTGCTCAACTTG
CTCTCGCCCTTCACGAACTTCTTGATCAACTCCATTGCTTCGGGGTTCAG
CGTCCTGGGGCCCTTTTCCTTCTTCCCACCAGAAGGATAGGTGTAGAATC
CTTTGCCCGTCTTGCGTCCCAACATCTTAGCCTTCATCAACGCATCCAGG
ACGGGGCCATCGCTTCCTCCCATCCGGACGCC back to topprotein sequence of jgi.p|Nanoce1779_2|595486 >mRNA_7066-protein ID=mRNA_7066-protein|Name=jgi.p|Nanoce1779_2|595486|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MTVSPPLPPRPVLLFGALLLLLPFIAHAFSFSFFRPAVAQQQRHARSSTL
MMSTTESKPITPKVGGAMPEGRRPDWFHVPAPGGSHTRFEELRESLRELD
LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPAAD
PLEPLKTAEAIARWGITYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPE
MLVECLVSDFAGDLKAVERLATSGLDVYAHNVETVERLQKYVRDKRATYA
QSLRVLAHAKECQPSVYTKTSLMLGLGETEEEVLQAMRDMRAHNVDVLTL
GQYLRPTEHHLAVVEYVTPDRFDFYRVKGEEMGFKYVASGPLVRSSYKAG
EFFLENELKRAKAEREGGGVVA* back to topmRNA from alignment at scaffold_16:211649..214779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7066 ID=mRNA_7066|Name=jgi.p|Nanoce1779_2|595486|organism=Nannochloropsis oceanica|type=mRNA|length=3131bp|location=Sequence derived from alignment at scaffold_16:211649..214779- (Nannochloropsis oceanica)
ACAGCCGTCACGTTGCTCACTTCGATCGATAGTTTGTTGTCCCCCTTCTC
CTTGAACGCGACGCAAGCACGGACGCACGAAGCAACGTCTGAGAGCCAAA
GGCAAGAGAGCAGGCAGCAGCATGACCGTGAGCCCACCACTCCCACCACG
ACCGGTCCTCCTCTTCGGCGCTCTCCTCCTTCTCCTCCCTTTTATTGCCC
ACGCCTTCTCTTTTTCCTTCTTCAGGCCGGCGGTGGCGCAACAACAACGC
CACGCCCGCAGCAGCACCCTAATGATGTCTACCACAGAGTCCAAGCCCAT
CACCCCCAAGGTGGGTGGCGCCATGCCCGAAGGCCGTCGTCCAGACTGGT
TTCACGTCCCAGCCCCCGGGGGCTCTCATACGCGCTTTGAGGAACTGAGG
GAGAGCCTGCGGGAGCTGGACTTGCACACCGTGTGCGAAGAGGCGCAATG
CCCTAATATCGGCGAGTGCTGGAACGGTGGCACCGGCACAATTATGTTGT
TGGGGGACACGTGCACGCGGTGAGTAAGGGGAGAGGAAAGAGGGAAGGCT
GTGAGGGGGGTAATGTGGTTTGTTATTCCTCGATCGCGGACGGGTCGTAG
CGGAGGGCTGGCGGGTTGGTAGGAGGAAGAGTCTGTCACACGGCCTAGAC
CATCATCTCTCCACTTATACTCCCTCCCTCCTCTCGCCCCCTCTCGCCCG
CCTCAAACCTTCCCTCAGTGGCTGCAAATTTTGCGCTGTCAAGACCTCCC
AAGCTCCTCCAGCTGCCGATCCCCTAGAGCCCCTTAAAACAGCCGAGGCC
ATTGCGCGTTGGGGTATAACCTACGTCGTGCTCACAAGCGTCGATCGCGA
CGACATGCCGGATGGAGGCGCGGACCACTTCGCACAAACGGTCGAGTACA
TCAAGTTGCGGAAGCCTGAGATGTTGGTTGAATGCCTAGTGAGTGATTTT
GCGGGGGACCTCAAGGCCGTTGAGAGGTTGGCAACGTCTGGTTTGGATGT
GTACGCGCACAACGTCGAAACGGTGGAGAGGCTTCAGAAATACGTTCGAG
ACAAGCGAGCGACATACGCACAGTCTCTCCGGGTGCTGGCGCATGCGAAG
GAGTGCCAACCATCCGTGTATACCAAGACGAGCTTAATGTTGGGGTTGGG
CGAGACCGAGGAAGAAGTATTGCAGGCCATGCGTGACATGCGCGCGCACA
ATGTGGACGTGTTGACGCTTGGTCAGTATTTGCGTCCAACTGAGCACCAT
TTGGCCGTGGTAGAGTATGTGACGCCAGATAGGTTCGACTTCTACCGCGT
AAAAGGGGAAGAAATGGGGTTTAAGTACGTGGCAAGTGGCCCGCTTGTCC
GATCTTCGTACAAAGCCGGAGAGTTCTTTTTGGAAAATGAGCTCAAGAGG
GCAAAGGCAGAGAGGGAGGGAGGAGGGGTAGTGGCATAGAGGAGAGCTGA
AGGTGTATATAGGGAGAGAAAGAAGAGAACGCGTATTAGTAGGCATCCTG
AAGGGCTGTAAGAGAGGATAGAGAGCGGCTGTTAGCTTAAAGTGCTGTGA
GTGTTATACGCGCGCAATCGAACATGTGATGTGATTTAAACCATGCGTGT
GCGGGTCGTGTGTGTGTGTGTGTGTGTGATATGTGTGTATTGTGTTTGTG
TGAGTGTAGGTGTTTTGTGAGGTGACCGACGGGAATGCTTCACGACATAT
GAGATGTTGTCGAGTTTCTCTTTGCGCTCAAATAAGAACGAATCACGACA
AGTGTGCTGACTTTTCCCTTCAAAATTTCGGTGCGTTTATTGATTTGTTA
CGGAGAATATGTTATGTCGTTGCGAGAGGTATTCATGCTGTTATCTTCAA
AAGTCCACATCGGCGTCCGCAACGCCATCCGTGCTTGGAGACCAATGTCG
TGGGGGTCGAGAGAGCCCTTTCGAACTTTTTTCGATGAAAATCATTTACA
TGCATTCTTATGTGTAAAAATAACACATTGTGGTGCCACGATCGCATGGC
ATCAACGGTTCTGTAAGCACTTACTTATCCCCTAAGTTGCAATGGCTACC
ATGACCACCAAGAGGACAACCCGTCCAGCCGCAATCTCAGCGGCAAAGGA
GGATGGGCACCGAAATTTCGGGCTAAATTGCATGGATAGCGAAAACATAA
TCGTGCAAAGTCGTCTCTATCGTGGGTTGTTTTGCCTCTTTTCCGAGCCC
TCGTGTTCCTCTTTGCCCATGAGGCCAAACAAGGCTCTCTTGCGTCCTCC
CCTACATCGTGCCCTTTCCTCTCCTCCCCTTGACTCGATCATCTGCTTCT
TAGTATCTGCACCCTTTTTCCTCTCTCGTACGCTCCTCCTATTCCTGCTT
TCCATTCCATTGTGGCTGACGACGCTTTTTTCTTCCCCTCCCTCCTTCAG
CCTTCCATCCTTTCACGTCTAATTCACGACGACAAAAATGGGCTATCCAC
CTCTCCTCCGGAATCTCATCTCCTCCGCACAACATAGCAAAAATCCCCTC
TTCCTCTATCTTATGTTTCTCTCTTTCACTCCTCACTTTGCTCCTCGTTC
TATCACTAAAACATATCAAAATTTCTCCCCTCGATATCACAGCCCCATCA
CATCATCCCATCCACCACCTATCGCCTCACACTACAACAGAAAGACAAAT
GAGCTTAGGACGAATGAAACCTCTTCTCGCTCTTCGCATGGTCCACCAAC
AACGGCGCAGGTGCAAATTGATAGCCATACTTGGCCGCAAAGCCTTCCAG
CATCGCACAGTACTTTCCGACTCCCATCGAGTCCAGAAGGCGGAAAGGTC
CTCCGAGGAAAGGTGGGAAACCAATCCCAAATACAGCGCCAATGTCACCC
TCCACAGGCGAGGCGATCACGCCGTCTTGCAGGGCGAAGACCGCCTCGTT
CACAAAGCGCGAAACCAAGCGATTCTGCACCTCCTCTTTGCTCAACTTGC
TCTCGCCCTTCACGAACTTCTTGATCAACTCCATTGCTTCGGGGTTCAGC
GTCCTGGGGCCCTTTTCCTTCTTCCCACCAGAAGGATAGGTGTAGAATCC
TTTGCCCGTCTTGCGTCCCAACATCTTAGCCTTCATCAACGCATCCAGGA
CGGGGCCATCGCTTCCTCCCATCCGGACGCC back to topCoding sequence (CDS) from alignment at scaffold_16:211649..214779- >mRNA_7066 ID=mRNA_7066|Name=jgi.p|Nanoce1779_2|595486|organism=Nannochloropsis oceanica|type=CDS|length=2238bp|location=Sequence derived from alignment at scaffold_16:211649..214779- (Nannochloropsis oceanica)
TGGCTGCAAATTTTGCGCTGTCAAGACCTCCCAAGCTCCTCCAGCTGCCG
ATCCCCTAGAGCCCCTTAAAACAGCCGAGGCCATTGCGCGTTGGGGTATA
ACCTACGTCGTGCTCACAAGCGTCGATCGCGACGACATGCCGGATGGAGG
CGCGGACCACTTCGCACAAACGGTCGAGTACATCAAGTTGCGGAAGCCTG
AGATGTTGGTTGAATGCCTAGTGAGTGATTTTGCGGGGGACCTCAAGGCC
GTTGAGAGGTTGGCAACGTCTGGTTTGGATGTGTACGCGCACAACGTCGA
AACGGTGGAGAGGCTTCAGAAATACGTTCGAGACAAGCGAGCGACATACG
CACAGTCTCTCCGGGTGCTGGCGCATGCGAAGGAGTGCCAACCATCCGTG
TATACCAAGACGAGCTTAATGTTGGGGTTGGGCGAGACCGAGGAAGAAGT
ATTGCAGGCCATGCGTGACATGCGCGCGCACAATGTGGACGTGTTGACGC
TTGGTCAGTATTTGCGTCCAACTGAGCACCATTTGGCCGTGGTAGAGTAT
GTGACGCCAGATAGGTTCGACTTCTACCGCGTAAAAGGGGAAGAAATGGG
GTTTAAGTACGTGGCAAGTGGCCCGCTTGTCCGATCTTCGTACAAAGCCG
GAGAGTTCTTTTTGGAAAATGAGCTCAAGAGGGCAAAGGCAGAGAGGGAG
GGAGGAGGGGTAGTGGCATAGATGACCGTGAGCCCACCACTCCCACCACG
ACCGGTCCTCCTCTTCGGCGCTCTCCTCCTTCTCCTCCCTTTTATTGCCC
ACGCCTTCTCTTTTTCCTTCTTCAGGCCGGCGGTGGCGCAACAACAACGC
CACGCCCGCAGCAGCACCCTAATGATGTCTACCACAGAGTCCAAGCCCAT
CACCCCCAAGGTGGGTGGCGCCATGCCCGAAGGCCGTCGTCCAGACTGGT
TTCACGTCCCAGCCCCCGGGGGCTCTCATACGCGCTTTGAGGAACTGAGG
GAGAGCCTGCGGGAGCTGGACTTGCACACCGTGTGCGAAGAGGCGCAATG
CCCTAATATCGGCGAGTGCTGGAACGGTGGCACCGGCACAATTATGTTGT
TGGGGGACACGTGCACGCGTGGCTGCAAATTTTGCGCTGTCAAGACCTCC
CAAGCTCCTCCAGCTGCCGATCCCCTAGAGCCCCTTAAAACAGCCGAGGC
CATTGCGCGTTGGGGTATAACCTACGTCGTGCTCACAAGCGTCGATCGCG
ACGACATGCCGGATGGAGGCGCGGACCACTTCGCACAAACGGTCGAGTAC
ATCAAGTTGCGGAAGCCTGAGATGTTGGTTGAATGCCTAGTGAGTGATTT
TGCGGGGGACCTCAAGGCCGTTGAGAGGTTGGCAACGTCTGGTTTGGATG
TGTACGCGCACAACGTCGAAACGGTGGAGAGGCTTCAGAAATACGTTCGA
GACAAGCGAGCGACATACGCACAGTCTCTCCGGGTGCTGGCGCATGCGAA
GGAGTGCCAACCATCCGTGTATACCAAGACGAGCTTAATGTTGGGGTTGG
GCGAGACCGAGGAAGAAGTATTGCAGGCCATGCGTGACATGCGCGCGCAC
AATGTGGACGTGTTGACGCTTGGTCAGTATTTGCGTCCAACTGAGCACCA
TTTGGCCGTGGTAGAGTATGTGACGCCAGATAGGTTCGACTTCTACCGCG
TAAAAGGGGAAGAAATGGGGTTTAAGTACGTGGCAAGTGGCCCGCTTGTC
CGATCTTCGTACAAAGCCGGAGAGTTCTTTTTGGAAAATGAGCTCAAGAG
GGCAAAGGCAGAGAGGGAGGGAGGAGGGGTAGTGGCATAGATGACCGTGA
GCCCACCACTCCCACCACGACCGGTCCTCCTCTTCGGCGCTCTCCTCCTT
CTCCTCCCTTTTATTGCCCACGCCTTCTCTTTTTCCTTCTTCAGGCCGGC
GGTGGCGCAACAACAACGCCACGCCCGCAGCAGCACCCTAATGATGTCTA
CCACAGAGTCCAAGCCCATCACCCCCAAGGTGGGTGGCGCCATGCCCGAA
GGCCGTCGTCCAGACTGGTTTCACGTCCCAGCCCCCGGGGGCTCTCATAC
GCGCTTTGAGGAACTGAGGGAGAGCCTGCGGGAGCTGGACTTGCACACCG
TGTGCGAAGAGGCGCAATGCCCTAATATCGGCGAGTGCTGGAACGGTGGC
ACCGGCACAATTATGTTGTTGGGGGACACGTGCACGCG back to top
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