NO22G00490, NO22G00490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00490 vs. NCBI_GenBank
Match: EWM21392.1 (Adaptin ear-binding coat-associated protein 1 NECAP-1 [Nannochloropsis gaditana]) HSP 1 Score: 232.3 bits (591), Expect = 1.900e-57 Identity = 121/164 (73.78%), Postives = 132/164 (80.49%), Query Frame = 0 Query: 65 PIVEQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQPDHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIKXXXXXXHVFIAIGFRERSDAFDLKALLEDMVSYNARMELANCRTREMDERVRKGRVREDKGEGGE 229 P VEQLRLHLREVFVYAVPRLV++ GYRAEDLNLPNPLLTGYLKAFQRGD +LFLRI+QPDH LFAECPI +L K K+PL SFFIPVVDSSRYFV+K H FIAIGFRERSDAFDLKALLED+V+YNAR ELA RT+ +D R R D G G E Sbjct: 40 PPVEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHTLFAECPIHVLPGK--KDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAG----RPDDGSGRE 197
BLAST of NO22G00490 vs. NCBI_GenBank
Match: GBG27394.1 (Adaptin ear-binding coat-associated protein 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 99.4 bits (246), Expect = 1.900e-17 Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 0 Query: 72 LHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQ-PDH-----VLFAECPITLLTN-KKIKNPLDSFFIPVVDSSRYFVIK--XXXXXXHVFIAIGFRERSDAFDLKALLEDMVSYNARME 202 L ++EVFVY +P L ++G+ A D NL P LTG L+ +GD +++L+I Q P+ LFA CPI L T+ K + LD F VVDSSRYFVI+ H +I IGF+ER AFDL+A L+D V +R E Sbjct: 21 LTIKEVFVYKIPPLQGSRGHHAADWNLDKPALTGQLRVISKGD-KVYLQILQLPESSAGLPQLFASCPIKLDTDASKPASKLDYFVQSVVDSSRYFVIRVQDEVSKRHAYIGIGFQERQSAFDLRAALDDEVRRISRGE 158
BLAST of NO22G00490 vs. NCBI_GenBank
Match: CBN75724.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5 bits (236), Expect = 2.800e-16 Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = 0 Query: 72 LHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQP--------DHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIK--XXXXXXHVFIAIGFRERSDAFDLKALLEDMVSYNARMELA 204 L ++EVFVY VP L + G+RAE+ L NP+ TG LK Q G+A LR+++P LFA+C + L + ++ ++S V+DSSRYFV++ H ++ +GFRERS AFD KA+L+D V + R + A Sbjct: 60 LTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTGVLKIAQVGNA-CCLRLFKPPPEGELGATPELFAQCEVRLDGGRTLQVYVES----VIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRA 196
BLAST of NO22G00490 vs. NCBI_GenBank
Match: XP_004992348.1 (hypothetical protein PTSG_06947 [Salpingoeca rosetta] >EGD75295.1 hypothetical protein PTSG_06947 [Salpingoeca rosetta]) HSP 1 Score: 88.6 bits (218), Expect = 3.400e-14 Identity = 51/128 (39.84%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 67 VEQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQPDHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIKXXXXXXHVFIAIGFRERSDAFDLKALLEDMV 195 +EQ++L LR+ FVY +P + KGYRA D L P+ TG +K +G LFAE PI K+ PVVDSSRYFV++ H F+ +GF+ERS+AFD L+D V Sbjct: 6 LEQVQLVLRQCFVYRLPPRPSTKGYRAADWGLDKPMWTGRVKVTTKGKLCTITLQDNATGKLFAEAPIRGDEVAKVVE-------PVVDSSRYFVVRVENQGRHAFLGMGFQERSEAFDFNVALQDFV 126
BLAST of NO22G00490 vs. NCBI_GenBank
Match: CCI43866.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 87.0 bits (214), Expect = 9.900e-14 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 0 Query: 67 VEQLRLHLREVFVY-AVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQP-----DHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIK--XXXXXXHVFIAIGFRERSDAFDLKALLEDMVSYNAR 200 +EQ+ R V+ Y VP+ ++ RA+ ++ +P +TG ++ QRGD + +R+Y+P D VLFAECP+ + + LD + VDSSRYF+I+ VF+ IGF ER+ AF+ KA L+D V Y R Sbjct: 10 IEQITFTDRSVWFYQIVPKYISTLEPRADLWDIEHPFMTGSIEVIQRGD-DCVIRLYEPLKDTTDKVLFAECPVRITPDCS----LDVYVQDCVDSSRYFMIRVEDRATKKRVFVGIGFPERTSAFNFKAALQDYVKYQRR 145
BLAST of NO22G00490 vs. NCBI_GenBank
Match: XP_008866420.1 (hypothetical protein H310_04055 [Aphanomyces invadans] >ETW04982.1 hypothetical protein H310_04055 [Aphanomyces invadans]) HSP 1 Score: 85.5 bits (210), Expect = 2.900e-13 Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 0 Query: 68 EQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQPDHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIKXXXXXXH--VFIAIGFRERSDAFDLKALLEDMVSYNAR 200 EQ H + V++Y VP L RA+ ++ PL+TG L+ Q D F+ +Y+P+ +FA+CP+ + + + PL+ F +DSSRYFV++ + F+ IG ERS AF+ KA L+D Y R Sbjct: 7 EQTLFHEKNVWIYKVPLLTGDP--RADQWDVEKPLMTGSLRVVQIND-RCFVNLYEPNQTIFAQCPVEIDSTR----PLNVFVQDCIDSSRYFVLRVVDANSNRQAFVGIGLPERSAAFNFKAALQDFAKYTQR 133
BLAST of NO22G00490 vs. NCBI_GenBank
Match: XP_003288793.1 (hypothetical protein DICPUDRAFT_48138 [Dictyostelium purpureum] >EGC34656.1 hypothetical protein DICPUDRAFT_48138 [Dictyostelium purpureum]) HSP 1 Score: 84.3 bits (207), Expect = 6.400e-13 Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = 0 Query: 68 EQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQPDH-VLFAECPITLLTNKKIKNPLDSFFI-PVVDSSRYFVIKXXXXXXHVFIAIGFRERSDAFDLKALLEDMVSY 197 EQ L +E F+Y +P +A+GY+A+D + + +G L RGD +R P+ +FA+CP+ DS + PVVDSSRYFVIK H F+ +GF +RSDAFD A L+D +Y Sbjct: 6 EQTLLIKKECFIYRIPPRPSAQGYKAQDWDPSTYIWSGRLVIVARGDL-CVIRFEDPNSGEIFAQCPV------------DSTAVEPVVDSSRYFVIKIKDGERHAFVGMGFTDRSDAFDFSATLQDHQNY 123
BLAST of NO22G00490 vs. NCBI_GenBank
Match: XP_009823525.1 (hypothetical protein H257_01823 [Aphanomyces astaci] >ETV86726.1 hypothetical protein H257_01823 [Aphanomyces astaci]) HSP 1 Score: 83.2 bits (204), Expect = 1.400e-12 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0 Query: 67 VEQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQPDHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIK--XXXXXXHVFIAIGFRERSDAFDLKALLEDMVSYNAR 200 +EQ H + V++Y VP L RA+ ++ PL+TG L+ Q D F+ +Y+ + LFA+CP+ + + PL +F VDSSRYFV++ F+ IG ERS AF+ KA L+D Y R Sbjct: 36 LEQTLFHEKNVWIYKVPLLTGDP--RADQWDVEKPLMTGSLRVAQIND-NCFVNLYEANQTLFAQCPVEIDATR----PLSAFVQDCVDSSRYFVLRVVDAKSGRQAFVGIGLPERSAAFNFKAALQDFAKYTQR 163
BLAST of NO22G00490 vs. NCBI_GenBank
Match: OQR81611.1 (kinesin family member 3B [Thraustotheca clavata]) HSP 1 Score: 83.2 bits (204), Expect = 1.400e-12 Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 0 Query: 67 VEQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQP---DHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIK--XXXXXXHVFIAIGFRERSDAFDLKALLEDMVSYNARMEL 203 +EQ + V++Y +P L+T + RA+ ++ PL+TG LK Q D + + +Y+P ++VLFAECPI + + PL F VDSSRYFV++ F+ IGF ERS AF+ +A LED Y R+ L Sbjct: 1 MEQTLFQEKNVWIYQIP-LLTGEP-RADAWDIDKPLMTGVLKVLQTND-DCRVALYEPKETENVLFAECPIDV----DAERPLTVFMQYCVDSSRYFVLRVVEPTSKRSAFVGIGFPERSSAFNFRAALEDFARYKQRLLL 134
BLAST of NO22G00490 vs. NCBI_GenBank
Match: XP_014210330.1 (NECAP-like protein CG9132 [Copidosoma floridanum]) HSP 1 Score: 82.8 bits (203), Expect = 1.900e-12 Identity = 50/133 (37.59%), Postives = 67/133 (50.38%), Query Frame = 0 Query: 61 EPPLPIVEQLRLHLREVFVYAVPRLVTAKGYRAEDLNLPNPLLTGYLKAFQRGDAELFLRIYQPDHVLFAECPITLLTNKKIKNPLDSFFIPVVDSSRYFVIKXXXXXXH-VFIAIGFRERSDAFDLKALLED 193 EP E + L EVFV+ +P T +GYRA D NL P TG ++ +GDA + LFA+CPI ++ PV DSSRYFV++ FI +GF +RSD+FDL L+D Sbjct: 2 EPTTETYESVLLVKSEVFVFKIPPRSTNRGYRAADWNLQEPSWTGRMRLVAQGDAVCIKLEDKASGQLFAKCPIETYPGIAVE--------PVTDSSRYFVLRIQDDNGRSAFIGVGFLDRSDSFDLNVALQD 126 The following BLAST results are available for this feature:
BLAST of NO22G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00490 ID=NO22G00490|Name=NO22G00490|organism=Nannochloropsis oceanica|type=gene|length=1301bpback to top protein sequence of NO22G00490.1 >NO22G00490.1-protein ID=NO22G00490.1-protein|Name=NO22G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=282bpback to top Synonyms
Publications
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