NO22G00310, NO22G00310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00310 vs. NCBI_GenBank
Match: XP_002287999.1 (catalytic subunit of clp protein superfamily, partial [Thalassiosira pseudonana CCMP1335] >EED95442.1 catalytic subunit of clp protein superfamily, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 238.0 bits (606), Expect = 2.000e-59 Identity = 115/154 (74.68%), Postives = 131/154 (85.06%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKR 155 MASL+TAQLLFLEAE P+KP YMYINSPGG+VTAG+A+YDTMQYI P V TICMGQA+SMGSLLL G G R ALPN++IMLHQP GGA+GMASDIDI AREIL+TR LN LYV HTG+ L+ IE+VMDRDTF D QAV+FGV+D +LTKR Sbjct: 38 MASLVTAQLLFLEAEAPEKPVYMYINSPGGLVTAGMAMYDTMQYIHPEVHTICMGQAASMGSLLLAGGSAGCRFALPNARIMLHQPSGGAQGMASDIDIQAREILRTRANLNQLYVHHTGRELEEIERVMDRDTFMDVRQAVDFGVIDEVLTKR 191
BLAST of NO22G00310 vs. NCBI_GenBank
Match: XP_002186519.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65989.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 236.5 bits (602), Expect = 5.900e-59 Identity = 115/154 (74.68%), Postives = 130/154 (84.42%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKR 155 MASL+TAQLLFLEAE+P+KP YMYINSPGG+VTAG+A+YDTMQYIRP V TICMGQA+SMGSLLL G PG R ALPNS+IMLHQP GGA+GMA+DIDI AREIL+TR LN LYV HTGQ L IE+VMDRD F D QA +FGV+D +L KR Sbjct: 55 MASLVTAQLLFLEAEHPEKPVYMYINSPGGLVTAGMAMYDTMQYIRPDVHTICMGQAASMGSLLLAGGTPGCRFALPNSRIMLHQPSGGAQGMAADIDIQAREILRTRANLNRLYVHHTGQELSEIERVMDRDYFLDVHQAKKFGVIDQVLDKR 208
BLAST of NO22G00310 vs. NCBI_GenBank
Match: WP_103022499.1 (ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. SAORIC-644] >PHR04134.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp.] >PNQ77807.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. SAORIC-644]) HSP 1 Score: 231.9 bits (590), Expect = 1.500e-57 Identity = 111/164 (67.68%), Postives = 138/164 (84.15%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKRTAAAVVEAGG 165 MASLITAQLLFLE+ENP KP MYINSPGG+VTAG+AI+DTMQYI+P V+T+CMGQA+SMGS LL AGEPGMR+ALPN++IM+HQP GGA GMASDI+I AREIL+ ++R+N LYV++TGQ+LD IEK MDRDTF + +A++FG+VD + R A +A G Sbjct: 66 MASLITAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCMGQAASMGSFLLAAGEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIKKRMNDLYVKYTGQSLDEIEKAMDRDTFLEADEAMKFGIVDKVFETRPEADGSDAEG 229
BLAST of NO22G00310 vs. NCBI_GenBank
Match: CBJ26066.1 (ATP-dependent Clp protease, proteolytic subunit ClpP [Ectocarpus siliculosus]) HSP 1 Score: 231.5 bits (589), Expect = 1.900e-57 Identity = 111/154 (72.08%), Postives = 128/154 (83.12%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKR 155 M SL+TAQLLFLE+ENPDKP MYINSPGG+VTAGLAIYDTMQY+RP + TICMGQA+SMGSLLLTAG P MR LPN+K+MLHQP GGA GMA+DI IMA EI+KTR RLN +Y +HTG+ + IEKVMDRD + +A+EFGVVD IL KR Sbjct: 79 MTSLVTAQLLFLESENPDKPINMYINSPGGVVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNDIYAEHTGREVGEIEKVMDRDFYMTAQEAIEFGVVDKILKKR 232
BLAST of NO22G00310 vs. NCBI_GenBank
Match: WP_067462652.1 (MULTISPECIES: ATP-dependent Clp protease proteolytic subunit [Erythrobacter] >KZX53064.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI00D59] >KZX88689.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0020] >KZY13911.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0038] >KZY16476.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0037] >KZY28048.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0037] >OAN86567.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. EhN03] >ASP31013.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter flavus]) HSP 1 Score: 231.1 bits (588), Expect = 2.500e-57 Identity = 111/164 (67.68%), Postives = 137/164 (83.54%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKRTAAAVVEAGG 165 MASLITAQLLFLE+ENP KP MYINSPGG+VTAG+AI+DTMQYI+P V+T+CMGQA+SMGS LL AGEPGMR+ALPN++IM+HQP GGA GMASDI+I AREIL+ ++R+N LYV++TGQ+LD IEK MDRDTF + +A++FG+VD + R EA G Sbjct: 62 MASLITAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCMGQAASMGSFLLAAGEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIKKRMNDLYVKYTGQSLDDIEKAMDRDTFLEADEAMKFGIVDKVFETRPETEGGEAEG 225
BLAST of NO22G00310 vs. NCBI_GenBank
Match: GAX97044.1 (ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Pythium insidiosum]) HSP 1 Score: 231.1 bits (588), Expect = 2.500e-57 Identity = 111/163 (68.10%), Postives = 132/163 (80.98%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKRTAAAVVEAG 164 MASL+TAQLLFLEAE+P+K YMYINSPGG+VT+GLAIYDTMQYI P V T+CMGQA+SMG+LLL AG PG R ALPNS+IM+HQP GGA+GMASDI I A EI+K R RLN L+V HTG+ L IEK MDRD F DP +A+EFG++D+I+ KR A +G Sbjct: 51 MASLVTAQLLFLEAEHPEKDVYMYINSPGGVVTSGLAIYDTMQYIHPRVNTLCMGQAASMGALLLAAGAPGCRYALPNSRIMVHQPSGGAQGMASDIAIQAEEIIKLRARLNGLFVHHTGKPLKTIEKAMDRDLFMDPPEALEFGIIDSIMNKRNLATNAPSG 213
BLAST of NO22G00310 vs. NCBI_GenBank
Match: WP_050600839.1 (MULTISPECIES: ATP-dependent Clp protease proteolytic subunit [Erythrobacter] >KNH01537.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter citreus LAMA 915] >KZX92789.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0019] >KZY09636.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0028] >KZY94898.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0074] >KZZ09322.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0077]) HSP 1 Score: 230.3 bits (586), Expect = 4.300e-57 Identity = 108/154 (70.13%), Postives = 134/154 (87.01%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKR 155 MASLITAQLLFLE+ENP KP MYINSPGG+VTAG+AI+DTMQYI+P V+T+CMGQA+SMGS LL AGEPGMR+ALPN++IM+HQP GGA GMASDI+I AREIL+ ++R+N LYV++TGQ+LD IEK MDRDTF + +A++FG+VD + R Sbjct: 62 MASLITAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCMGQAASMGSFLLAAGEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIKKRMNDLYVKYTGQSLDDIEKAMDRDTFLEADEAMKFGIVDKVFETR 215
BLAST of NO22G00310 vs. NCBI_GenBank
Match: WP_067696732.1 (ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. AP23] >KWV92559.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. AP23]) HSP 1 Score: 229.6 bits (584), Expect = 7.300e-57 Identity = 110/164 (67.07%), Postives = 137/164 (83.54%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKRTAAAVVEAGG 165 MASLITAQLLFLE+ENP KP MYINSPGG+VTAG+AI+DTMQYI+P V+T+CMGQA+SMGS LL AGEPGMR+ALPN++IM+HQP GGA GMASDI+I AREIL+ ++R+N LYV++TGQ L+ IEK MDRDTF + +A++FG+VD + R + EA G Sbjct: 62 MASLITAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCMGQAASMGSFLLAAGEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIKKRMNDLYVKYTGQNLEEIEKAMDRDTFLEADEAMKFGIVDKVFETRPESEGGEADG 225
BLAST of NO22G00310 vs. NCBI_GenBank
Match: WP_067681445.1 (ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0063] >KZY56217.1 ATP-dependent Clp protease proteolytic subunit [Erythrobacter sp. HI0063]) HSP 1 Score: 229.2 bits (583), Expect = 9.500e-57 Identity = 108/154 (70.13%), Postives = 133/154 (86.36%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKR 155 MASLITAQLLFLE+ENP KP MYINSPGG+VTAG+AI+DTMQYI+P V+T+CMGQA+SMGS LL AGEPGMR+ALPN++IM+HQP GGA GMASDI+I AREIL+ R+R+N LYV++TG++L IEK MDRDTF + +A+EFG+VD + R Sbjct: 64 MASLITAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCMGQAASMGSFLLAAGEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKYTGKSLTEIEKAMDRDTFLEAEEAMEFGIVDKVFETR 217
BLAST of NO22G00310 vs. NCBI_GenBank
Match: WP_034903265.1 (ATP-dependent Clp protease proteolytic subunit [Erythrobacter litoralis] >KEO93294.1 Clp protease [Erythrobacter litoralis] >AOL24468.1 ATP-dependent Clp protease, protease subunit ClpP [Erythrobacter litoralis]) HSP 1 Score: 227.6 bits (579), Expect = 2.800e-56 Identity = 107/154 (69.48%), Postives = 132/154 (85.71%), Query Frame = 0 Query: 1 MASLITAQLLFLEAENPDKPCYMYINSPGGIVTAGLAIYDTMQYIRPPVATICMGQASSMGSLLLTAGEPGMRMALPNSKIMLHQPRGGAEGMASDIDIMAREILKTRERLNALYVQHTGQALDAIEKVMDRDTFFDPTQAVEFGVVDTILTKR 155 MASLITAQLLFLE+ENP KP MYINSPGG+VTAG+AI+DTMQYI+P V+T+CMGQA+SMGS LL AGEPGMR+ALPN++IM+HQP GGA GMASDI+I AREIL+ + R+N LYV++TGQ+LD IE+ MDRDTF + +A +FG+VD + R Sbjct: 64 MASLITAQLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCMGQAASMGSFLLAAGEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIKARMNDLYVKYTGQSLDEIERAMDRDTFLEAEEAQKFGIVDKVFETR 217 The following BLAST results are available for this feature:
BLAST of NO22G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00310 ID=NO22G00310|Name=NO22G00310|organism=Nannochloropsis oceanica|type=gene|length=1939bpback to top protein sequence of NO22G00310.1 >NO22G00310.1-protein ID=NO22G00310.1-protein|Name=NO22G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bpback to top protein sequence of NO22G00310.2 >NO22G00310.2-protein ID=NO22G00310.2-protein|Name=NO22G00310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=166bpback to top protein sequence of NO22G00310.3 >NO22G00310.3-protein ID=NO22G00310.3-protein|Name=NO22G00310.3|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top Synonyms
Publications
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